snap_masked-scaffold33_size549341-processed-gene-0.13-mRNA-1, snap_masked-scaffold33_size549341-processed-gene-0.13-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namesnap_masked-scaffold33_size549341-processed-gene-0.13-mRNA-1
Unique Namesnap_masked-scaffold33_size549341-processed-gene-0.13-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold33_size549341supercontigscaffold33_size549341:77867..78811 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
protein will die slowlysnap_masked-scaffold33_size549341-processed-gene-0.13Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
snap_masked-scaffold33_size549341-processed-gene-0.13-mRNA-1:exon:1106snap_masked-scaffold33_size549341-processed-gene-0.13-mRNA-1:exon:1106Tigriopus kingsejongensisexon
snap_masked-scaffold33_size549341-processed-gene-0.13-mRNA-1:cdssnap_masked-scaffold33_size549341-processed-gene-0.13-mRNA-1:cdsTigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1988350auto1988350Tigriopus kingsejongensispolypeptide
Tk11519Tk11519Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk11519

>Tk11519 ID=Tk11519|Name=Tk11519|organism=Tigriopus kingsejongensis|type=polypeptide|length=314bp
MDSSGAKSGSVKPNYTLKFTLAGHTKAVSAVKFSPNGEWLASSSADKLVK
IWGAYDGKFEKTISGHKLGISDVAWSSDSRFVVSASDDKTLKIWELSSGK
CLKTLKGHSNYVFCCNFNPQSNLVVSGSFDESVRIWDVRTGKCLKTLPAH
SDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFV
KFSPNGKYILAATLDNTLKLWDYSKGKCLKTYSGHRNEKYCIFANFSVTG
GKWIVSGSEDNMVYIWNLQTKEVVQKLLGHTDVVLCTACHPTENIIASAA
LENDKTIKLWKSDT
back to top

mRNA from alignment at scaffold33_size549341:77867..78811-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold33_size549341-processed-gene-0.13-mRNA-1 ID=snap_masked-scaffold33_size549341-processed-gene-0.13-mRNA-1|Name=snap_masked-scaffold33_size549341-processed-gene-0.13-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=945bp|location=Sequence derived from alignment at scaffold33_size549341:77867..78811- (Tigriopus kingsejongensis)
ATGGACTCGTCCGGGGCCAAGAGCGGCTCGGTAAAGCCCAACTACACCCT
CAAGTTCACCCTCGCCGGGCACACCAAGGCCGTGTCGGCCGTCAAGTTCA
GTCCGAACGGCGAATGGCTGGCCAGTTCCTCGGCCGACAAGTTGGTCAAG
ATCTGGGGCGCCTACGACGGCAAGTTCGAGAAGACCATCTCGGGCCACAA
GCTGGGCATATCGGATGTGGCCTGGTCCAGCGACTCGCGCTTCGTGGTGA
GCGCCTCCGACGACAAGACGCTCAAGATCTGGGAGCTGAGCTCGGGCAAG
TGCCTCAAGACGCTCAAGGGCCACAGCAACTACGTGTTCTGCTGCAACTT
CAACCCTCAGTCCAACTTGGTGGTGTCGGGCTCCTTCGACGAGAGCGTGC
GCATTTGGGACGTGCGGACGGGCAAGTGTCTCAAGACGCTGCCCGCCCAC
TCCGACCCGGTCAGCGCGGTCCACTTTAATCGCGACGGCTCGCTCATCGT
GTCCAGCAGCTACGACGGGCTGTGCCGCATCTGGGATACGGCCTCGGGCC
AGTGCCTGAAAACCCTCATCGACGACGACAACCCGCCCGTGTCCTTCGTC
AAGTTTTCGCCCAACGGCAAGTACATATTGGCCGCCACGCTCGACAACAC
GCTCAAGCTGTGGGACTACTCCAAAGGCAAATGCCTCAAGACCTACTCGG
GCCATCGCAACGAGAAGTACTGCATCTTCGCCAACTTCTCGGTCACAGGC
GGCAAGTGGATCGTGTCTGGCTCCGAGGATAACATGGTGTACATCTGGAA
CCTTCAGACCAAAGAAGTCGTGCAAAAGTTGCTCGGACACACGGACGTGG
TGCTCTGCACGGCCTGTCATCCCACGGAGAACATCATTGCCTCGGCCGCG
CTCGAGAACGACAAGACCATCAAGCTTTGGAAGAGCGACACCTGA
back to top
Add to Basket