snap_masked-scaffold34_size539781-processed-gene-4.6-mRNA-1, snap_masked-scaffold34_size539781-processed-gene-4.6-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namesnap_masked-scaffold34_size539781-processed-gene-4.6-mRNA-1
Unique Namesnap_masked-scaffold34_size539781-processed-gene-4.6-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold34_size539781supercontigscaffold34_size539781:498055..501649 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
GL24962snap_masked-scaffold34_size539781-processed-gene-4.6Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
snap_masked-scaffold34_size539781-processed-gene-4.6-mRNA-1:exon:144snap_masked-scaffold34_size539781-processed-gene-4.6-mRNA-1:exon:144Tigriopus kingsejongensisexon
snap_masked-scaffold34_size539781-processed-gene-4.6-mRNA-1:exon:145snap_masked-scaffold34_size539781-processed-gene-4.6-mRNA-1:exon:145Tigriopus kingsejongensisexon
snap_masked-scaffold34_size539781-processed-gene-4.6-mRNA-1:exon:146snap_masked-scaffold34_size539781-processed-gene-4.6-mRNA-1:exon:146Tigriopus kingsejongensisexon
snap_masked-scaffold34_size539781-processed-gene-4.6-mRNA-1:exon:147snap_masked-scaffold34_size539781-processed-gene-4.6-mRNA-1:exon:147Tigriopus kingsejongensisexon
snap_masked-scaffold34_size539781-processed-gene-4.6-mRNA-1:exon:148snap_masked-scaffold34_size539781-processed-gene-4.6-mRNA-1:exon:148Tigriopus kingsejongensisexon
snap_masked-scaffold34_size539781-processed-gene-4.6-mRNA-1:exon:149snap_masked-scaffold34_size539781-processed-gene-4.6-mRNA-1:exon:149Tigriopus kingsejongensisexon
snap_masked-scaffold34_size539781-processed-gene-4.6-mRNA-1:exon:150snap_masked-scaffold34_size539781-processed-gene-4.6-mRNA-1:exon:150Tigriopus kingsejongensisexon
snap_masked-scaffold34_size539781-processed-gene-4.6-mRNA-1:five_prime_utrsnap_masked-scaffold34_size539781-processed-gene-4.6-mRNA-1:five_prime_utrTigriopus kingsejongensisexon
snap_masked-scaffold34_size539781-processed-gene-4.6-mRNA-1:cdssnap_masked-scaffold34_size539781-processed-gene-4.6-mRNA-1:cdsTigriopus kingsejongensisexon
snap_masked-scaffold34_size539781-processed-gene-4.6-mRNA-1:cdssnap_masked-scaffold34_size539781-processed-gene-4.6-mRNA-1:cds-2020014Tigriopus kingsejongensisexon
snap_masked-scaffold34_size539781-processed-gene-4.6-mRNA-1:cdssnap_masked-scaffold34_size539781-processed-gene-4.6-mRNA-1:cds-2020015Tigriopus kingsejongensisexon
snap_masked-scaffold34_size539781-processed-gene-4.6-mRNA-1:cdssnap_masked-scaffold34_size539781-processed-gene-4.6-mRNA-1:cds-2020016Tigriopus kingsejongensisexon
snap_masked-scaffold34_size539781-processed-gene-4.6-mRNA-1:cdssnap_masked-scaffold34_size539781-processed-gene-4.6-mRNA-1:cds-2020017Tigriopus kingsejongensisexon
snap_masked-scaffold34_size539781-processed-gene-4.6-mRNA-1:cdssnap_masked-scaffold34_size539781-processed-gene-4.6-mRNA-1:cds-2020018Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto2020019auto2020019Tigriopus kingsejongensispolypeptide
Tk05366Tk05366Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk05366

>Tk05366 ID=Tk05366|Name=Tk05366|organism=Tigriopus kingsejongensis|type=polypeptide|length=392bp
LHPLSTMVGKTNTGFSSSNDDPVGEGRPKDPNDSSIARNLTLEAFPSDKY
YRRMSSVHFNEDRPTIEQLKCGELTDKSSNEMEDGEAPVHDQSFKMGWAK
GVFMPCILNIWGVMLFLRLSWVVGQCGILQGILVITLCNIVTFITSLSMS
AVSTNGQIKGGGIYYMISRSLGAEFGGAIGIMLTIANSIAVATYIIGFVD
SLIDMLEEFVDNFQGIVGTLDDRVNDVRWIGAVVLFLCLVLAIVGMSWVI
RVQMFLLVLLIISQLDFIVGSFIPGEDEAKYGFVGYSAETISKNFLNTNY
HDYEKPDSSPGFFQVFAVFFPAVTGIVAGANMSGDLKDPAVAIPKGTLSA
VILTYVSYVGYAIMIGSCYLSEASGDAAEYNAFLNDNATLEI
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mRNA from alignment at scaffold34_size539781:498055..501649+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold34_size539781-processed-gene-4.6-mRNA-1 ID=snap_masked-scaffold34_size539781-processed-gene-4.6-mRNA-1|Name=snap_masked-scaffold34_size539781-processed-gene-4.6-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=3595bp|location=Sequence derived from alignment at scaffold34_size539781:498055..501649+ (Tigriopus kingsejongensis)
CGGCCTGCGGATTGAAGCCTCCCTATATATATCTAGGCACGAGTTTCACA
TGATAAAAACAGTTCAAGTTAGCCGATCAAGTGAAGCAGTACCAAGAAAT
ACACACAACAATTGCACCCATTGTCAACTATGGTGGGAAAAACAAACACG
GGGTTCTCGTCGTCAAATGACGATCCCGTTGGCGAGGGACGTCCCAAGGA
TCCCAACGACTCGAGCATTGCCCGCAATCTTACAGTAAGAGCTGATAATT
GAATTAGACAAGGAGCAATGTTAATATGATGGGTGAATTTCTGTTTCAGT
TGGAAGCCTTTCCATCCGATAAATACTATCGCCGAATGTCATCGGTCCAC
TTCAATGAGGACCGACCTACCATTGAGCAATTGAAATGTGGAGAACTGAC
CGACAAATCTAGCAATGTAAGTTGAAATCCATGAGGAGGTACCGACTCGT
ATTCCAAACAACTTTCTCGTATGTACATTAGGAGATGGAAGACGGAGAGG
CTCCTGTGCATGACCAGAGCTTCAAGATGGGCTGGGCCAAAGGTGTGTTC
ATGCCTTGTATCTTGAACATTTGGGGCGTGATGCTCTTCCTCCGATTGTC
GTGGGTGGTTGGCCAATGTGGAATATGTAAGTAAATACGTCCATCCGCTG
TTTTCGGTTAGCTTATTCTGGAATTTCCATATTCCAGTACAAGGGATCCT
GGTCATCACTCTGTGCAACATTGTCACCTTCATCACGTCATTGTCCATGT
CGGCCGTGTCCACCAATGGTCAAATCAAAGGCGGTGGGATTTACTATATG
ATCTCCAGATCCTTGGGCGCCGAGTTTGGAGGAGCCATTGGGATCATGCT
CACCATTGCCAACTCCATTGCCGTGGCCACTTACATCATCGGATTCGTGG
ACTCGCTCATCGACATGTTGGAGGAGTTCGTGGACAACTTCCAAGGGATT
GTTGGCACTTTGGACGATCGAGTCAACGATGTCCGATGGATTGGTGCCGT
TGTCCTCTTTCTGTGCTTGGTTCTGGCCATTGTGGGCATGAGCTGGGTGA
TTCGGGTCCAAATGTTCCTCCTGGTTCTTCTGATCATATCCCAACTGGAC
TTCATTGTGGGCTCCTTCATCCCCGGTGAAGATGAGGCAAAATATGGATT
TGTGGGCTACTCAGGTACGAATATGCAGGCCAAAACTGCCAGTCCATACA
TACATACTTCAATCCCTTGATTGTTTCGTTGCAGCCGAAACAATTTCCAA
GAACTTTCTCAACACCAACTACCATGATTACGAAAAACCGGACAGCTCTC
CGGGATTTTTCCAAGTATTTGCCGTGTTCTTCCCTGCAGTCACGGGGATT
GTGGCGGGAGCAAACATGTCTGGAGATCTCAAGGATCCAGCTGTGGCCAT
TCCCAAAGGTAAACCGTTCAAGGACCCATTTCAGTCCAACACATGTTCAC
CGCCTGAAATTCCATCAGGTACCTTGTCGGCCGTCATTTTGACCTACGTC
TCGTATGTGGGTTATGCCATCATGATTGGGAGCTGCTATCTCTCGGAAGC
CTCTGGCGATGCAGCCGAATATAACGCCTTCCTCAATGATAACGCCACGC
TAGAGGTCAATTTTACCTGTTGATCATTGGATGTTCCGTATTCGCATTTG
CGGAAGGTGCAATTGTTGAAGCTGAACACCTCTAGCGTGGCGTTATCATT
GAGGAAGGCGTTATATTCGGCTGCATCGCCAGAGGCTTCCGAGAGATAGC
AGCTCCCAATCATGATGGCATAACCCACNCATGGAAAGGTGATCTAATCG
CCACGCTACGCGATGATTCGAAGTTTCCAGCAACGGTCATGGTCTTTGGT
GTGATCTCATCTGCAGGTGATGTCATGCCTCCGTACATCTTCCCCAAGGG
CCTGAAGGTCAATACAGAGGAGTATCTCAAGGTCTTGGAGACCCATGTGC
TTCCTTGGATCAAGAAGGTCGCTGCTGGACGTCCATATGTGTGGCAACAG
GACTCTGCTCCATGCCATACCTCAAGGAAGTCTGTCAAGTGGCTGGCAGA
GAATTTCCATGATTTCGTCTCTCCAGATGTCTGGCCTCCCAACTCACCTG
ACCTGAATCCTATGGACTATTTCGTCTGGGGCGCGATCGAACGACATACT
AACAAGACTCCATGCAACACAAAGGAAGAGTTGGTCAAGAGGATCAAGAA
GGAATTCCGCACCCTCTCCAAGGACATCGTCATCAAGACGTGCAGTAGAT
TTCGTGGCCGAATCGAAGCTGTGATTGACGCTGGAGGCGACTTCATTGAA
TAAGAAATAAAATTCAGATTCTCATCTTTCAAATAGCGTTGGTTTTAGTC
AAATCGGACGAGTAGATCCTGAGATATGAGCGTTTGAAAAAAAAGTAGGT
TTGGTTTCCAAAGATCCCTGGCACCCTGTATATACATGTATATGTGAACA
TGTAATGTACGTATGTGTGTAATCGTTTTTTCCTACATATTTAAATAGGT
CTATGCCCGGGATGAACACTTTGCCAACGAATGCTAAACATTAGTGTTAA
TGTCCATTAATAATAAAAAAGTATACAAATACAGTGGTAACACAAAACAC
GATTACTATAGAAACATAACAACATTAAAGCAAACTATACAAACAAAACA
ACACAACAGAATAATGGAAAAGCACAATAAATGTTTGCAAGCCTATGCAA
ATCAATAAATGTTTCCAGAACTAAACAATACGCAATACATGTTTCCAGAA
CTAAACAACACGCAATACATGTTTCCAGAACTAAACAACACGCAATACAT
GTTTCCAGAACTAAACAACACGCAATACATGTTTCCAGAACTAAACAACA
CGCAATACATGTTTCCAGAACTAAACAACACGCAATAAATGTTTAAGCTG
AACCAGACAATGGTTGTATACAAAACTATAAACTATACCAAACGGAAGAA
ATAGTACACATTACTATACAAAACGCAACAGATGTTTAAAGAACACTATG
AAACTCAAAAAAGGCTCTGTAGAATAAAATAGCACGCATCGTAAAATAGT
AAAGAACGCACAAATCAAGTAAAGAAATAGCCAATAACAGAACTGCATGA
TATTGATCAAATAGGGCTAGGTAATTGGCCGTAGTTTCAAAATGTCTCAA
TCAAAGTTGGTGATATTTCCATGGCTGATGAAGGATTGAGTGTTTTTCTG
AATCCAGCAGAAAATAGCCATTTCGATAGCATAAGTGAAGAAGCAGAACT
TGAGTTGAGTTCCTTTTAACCCTCAATGATCGGGAATTGAAGTTGATCGG
GAATTGAAGTTAATCTGAAGTTGACACCTTATGCATCCTATGATATGATT
CCAACTTCAACACCTAGCGAAATTTGACATCATTTGCTCTTAAGATGGTG
AAACACTGGATCCAGAACAAAAAAAGAAAATCCTCTCCAAATTGGAAAAA
TAGGTCAAGTGTGAAGGCCAGAATAACGGTTCAGTATTAAGACTTAGACT
AAAGATACTCAGGACTCATGGCAATATTTTTGACTAAAGACTGAATGAGA
TACAGCCTCTACTTGTTCTGCCTTAATTTTGAATTCTAGATCTAG
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