snap_masked-scaffold363_size195477-processed-gene-0.33-mRNA-1, snap_masked-scaffold363_size195477-processed-gene-0.33-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview


Name	snap_masked-scaffold363_size195477-processed-gene-0.33-mRNA-1
Unique Name	snap_masked-scaffold363_size195477-processed-gene-0.33-mRNA-1
Type	mRNA
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold363_size195477	supercontig	scaffold363_size195477:168900..173815 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
prx- prx- prx-3	snap_masked-scaffold363_size195477-processed-gene-0.33	Tigriopus kingsejongensis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
snap_masked-scaffold363_size195477-processed-gene-0.33-mRNA-1:exon:1703	snap_masked-scaffold363_size195477-processed-gene-0.33-mRNA-1:exon:1703	Tigriopus kingsejongensis	exon
snap_masked-scaffold363_size195477-processed-gene-0.33-mRNA-1:exon:1704	snap_masked-scaffold363_size195477-processed-gene-0.33-mRNA-1:exon:1704	Tigriopus kingsejongensis	exon
snap_masked-scaffold363_size195477-processed-gene-0.33-mRNA-1:cds	snap_masked-scaffold363_size195477-processed-gene-0.33-mRNA-1:cds	Tigriopus kingsejongensis	exon
snap_masked-scaffold363_size195477-processed-gene-0.33-mRNA-1:cds	snap_masked-scaffold363_size195477-processed-gene-0.33-mRNA-1:cds-2005393	Tigriopus kingsejongensis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto2005394	auto2005394	Tigriopus kingsejongensis	polypeptide
Tk06663	Tk06663	Tigriopus kingsejongensis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at scaffold363_size195477:168900..173815-

protein sequence of Tk06663

>Tk06663 ID=Tk06663|Name=Tk06663|organism=Tigriopus kingsejongensis|type=polypeptide|length=157bp
MGLGARCATAHWRPIATTAVLPVPQIQKPAPAFKAQAVVNGDFKEIQLSD
FRGQYLVLYFYPLDFTFVCPTEIIAFSDRIQEFRDINCEVVGVSTDSHFS
HLAWINMARKEGGLGGLNYPLAADFSKQIARDYGVLLEEAGVALRGLFII
DPEFILQ

mRNA from alignment at scaffold363_size195477:168900..173815-

Legend: polypeptideexon

Hold the cursor over a type above to highlight its positions in the sequence below.

>snap_masked-scaffold363_size195477-processed-gene-0.33-mRNA-1 ID=snap_masked-scaffold363_size195477-processed-gene-0.33-mRNA-1|Name=snap_masked-scaffold363_size195477-processed-gene-0.33-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=4916bp|location=Sequence derived from alignment at scaffold363_size195477:168900..173815- (Tigriopus kingsejongensis)
ATGGGCTTGGGGGCCCGATGCGCCACCGCCCACTGGCGTCCTATCGCCAC
CACGGCCGTCTTGCCCGTGCCTCAAATCCAGAAGCCCGCTCCCGCGTTCA
AGGCCCAAGCCGTGGTCAACGGCGATTTCAAGGAGATCCAGTTGTCCGAC
TTCCGCGGCCAATACCTGGTGCTCTACTTCTACCCGCTCGATTTCACCTT
CGTCTGCCCCACCGAGATCATCGCCTTCTCCGACCGGATCCAGGAGTTCC
GCGACATCAACTGCGAGGTGGTGGGCGTGTCCACCGACTCCCACTTCTCC
CATCTGGCCTGGATCAACATGGCCCGCAAGGAGGGCGGTCTGGGCGGGCT
CAACTATCCCTTGGCGGCCGATTTTAGCAAGCAGATCGCCCGTGATTATG
GTGTGCTCCTCGAGGAGGCCGGCGTAGCTCTCCGAGGGTTGTTCATCATC
GATCCGGAGGTGAGAATTGAGTGTCTAGGCCATCTACGTGGCGAGGGGGC
TAACCTAGATAGTACCCTGTCCTGGGGTATCTCGTGCATCAACCTTTCCA
TCGTAACTTTGATCGACACTGGTTGAACTTGGGTTATACGTGCAATAAGC
TGTCGCCGCCGCACTACTTGATTTTCTTCCATTTGACCAGNNNNNNNNNN
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CCATCGAACTGGATTTCAAGACAGAGGCTTGTCTTCCTCGACGACATGTT
TATGACCGTCCGAATGTTCTGAATCAATTCCATCGTCCTCAGGAATTCGA
GTGAGTAATCGTTGGCCTCAGCCTGGTTTTCATAACCGATATGTTTTTCA
GTTCATCCTACAATAG

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