snap_masked-scaffold38_size502422-processed-gene-3.12-mRNA-1, snap_masked-scaffold38_size502422-processed-gene-3.12-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namesnap_masked-scaffold38_size502422-processed-gene-3.12-mRNA-1
Unique Namesnap_masked-scaffold38_size502422-processed-gene-3.12-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold38_size502422supercontigscaffold38_size502422:311963..318043 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
dna polymerase delta catalytic subunitsnap_masked-scaffold38_size502422-processed-gene-3.12Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
snap_masked-scaffold38_size502422-processed-gene-3.12-mRNA-1:exon:878snap_masked-scaffold38_size502422-processed-gene-3.12-mRNA-1:exon:878Tigriopus kingsejongensisexon
snap_masked-scaffold38_size502422-processed-gene-3.12-mRNA-1:exon:879snap_masked-scaffold38_size502422-processed-gene-3.12-mRNA-1:exon:879Tigriopus kingsejongensisexon
snap_masked-scaffold38_size502422-processed-gene-3.12-mRNA-1:exon:880snap_masked-scaffold38_size502422-processed-gene-3.12-mRNA-1:exon:880Tigriopus kingsejongensisexon
snap_masked-scaffold38_size502422-processed-gene-3.12-mRNA-1:exon:881snap_masked-scaffold38_size502422-processed-gene-3.12-mRNA-1:exon:881Tigriopus kingsejongensisexon
snap_masked-scaffold38_size502422-processed-gene-3.12-mRNA-1:exon:882snap_masked-scaffold38_size502422-processed-gene-3.12-mRNA-1:exon:882Tigriopus kingsejongensisexon
snap_masked-scaffold38_size502422-processed-gene-3.12-mRNA-1:exon:883snap_masked-scaffold38_size502422-processed-gene-3.12-mRNA-1:exon:883Tigriopus kingsejongensisexon
snap_masked-scaffold38_size502422-processed-gene-3.12-mRNA-1:exon:884snap_masked-scaffold38_size502422-processed-gene-3.12-mRNA-1:exon:884Tigriopus kingsejongensisexon
snap_masked-scaffold38_size502422-processed-gene-3.12-mRNA-1:exon:885snap_masked-scaffold38_size502422-processed-gene-3.12-mRNA-1:exon:885Tigriopus kingsejongensisexon
snap_masked-scaffold38_size502422-processed-gene-3.12-mRNA-1:exon:886snap_masked-scaffold38_size502422-processed-gene-3.12-mRNA-1:exon:886Tigriopus kingsejongensisexon
snap_masked-scaffold38_size502422-processed-gene-3.12-mRNA-1:exon:887snap_masked-scaffold38_size502422-processed-gene-3.12-mRNA-1:exon:887Tigriopus kingsejongensisexon
snap_masked-scaffold38_size502422-processed-gene-3.12-mRNA-1:exon:888snap_masked-scaffold38_size502422-processed-gene-3.12-mRNA-1:exon:888Tigriopus kingsejongensisexon
snap_masked-scaffold38_size502422-processed-gene-3.12-mRNA-1:exon:889snap_masked-scaffold38_size502422-processed-gene-3.12-mRNA-1:exon:889Tigriopus kingsejongensisexon
snap_masked-scaffold38_size502422-processed-gene-3.12-mRNA-1:exon:890snap_masked-scaffold38_size502422-processed-gene-3.12-mRNA-1:exon:890Tigriopus kingsejongensisexon
snap_masked-scaffold38_size502422-processed-gene-3.12-mRNA-1:exon:891snap_masked-scaffold38_size502422-processed-gene-3.12-mRNA-1:exon:891Tigriopus kingsejongensisexon
snap_masked-scaffold38_size502422-processed-gene-3.12-mRNA-1:three_prime_utrsnap_masked-scaffold38_size502422-processed-gene-3.12-mRNA-1:three_prime_utrTigriopus kingsejongensisexon
snap_masked-scaffold38_size502422-processed-gene-3.12-mRNA-1:cdssnap_masked-scaffold38_size502422-processed-gene-3.12-mRNA-1:cdsTigriopus kingsejongensisexon
snap_masked-scaffold38_size502422-processed-gene-3.12-mRNA-1:cdssnap_masked-scaffold38_size502422-processed-gene-3.12-mRNA-1:cds-2016343Tigriopus kingsejongensisexon
snap_masked-scaffold38_size502422-processed-gene-3.12-mRNA-1:cdssnap_masked-scaffold38_size502422-processed-gene-3.12-mRNA-1:cds-2016344Tigriopus kingsejongensisexon
snap_masked-scaffold38_size502422-processed-gene-3.12-mRNA-1:cdssnap_masked-scaffold38_size502422-processed-gene-3.12-mRNA-1:cds-2016345Tigriopus kingsejongensisexon
snap_masked-scaffold38_size502422-processed-gene-3.12-mRNA-1:cdssnap_masked-scaffold38_size502422-processed-gene-3.12-mRNA-1:cds-2016346Tigriopus kingsejongensisexon
snap_masked-scaffold38_size502422-processed-gene-3.12-mRNA-1:cdssnap_masked-scaffold38_size502422-processed-gene-3.12-mRNA-1:cds-2016347Tigriopus kingsejongensisexon
snap_masked-scaffold38_size502422-processed-gene-3.12-mRNA-1:cdssnap_masked-scaffold38_size502422-processed-gene-3.12-mRNA-1:cds-2016348Tigriopus kingsejongensisexon
snap_masked-scaffold38_size502422-processed-gene-3.12-mRNA-1:cdssnap_masked-scaffold38_size502422-processed-gene-3.12-mRNA-1:cds-2016349Tigriopus kingsejongensisexon
snap_masked-scaffold38_size502422-processed-gene-3.12-mRNA-1:cdssnap_masked-scaffold38_size502422-processed-gene-3.12-mRNA-1:cds-2016350Tigriopus kingsejongensisexon
snap_masked-scaffold38_size502422-processed-gene-3.12-mRNA-1:cdssnap_masked-scaffold38_size502422-processed-gene-3.12-mRNA-1:cds-2016351Tigriopus kingsejongensisexon
snap_masked-scaffold38_size502422-processed-gene-3.12-mRNA-1:cdssnap_masked-scaffold38_size502422-processed-gene-3.12-mRNA-1:cds-2016352Tigriopus kingsejongensisexon
snap_masked-scaffold38_size502422-processed-gene-3.12-mRNA-1:cdssnap_masked-scaffold38_size502422-processed-gene-3.12-mRNA-1:cds-2016353Tigriopus kingsejongensisexon
snap_masked-scaffold38_size502422-processed-gene-3.12-mRNA-1:cdssnap_masked-scaffold38_size502422-processed-gene-3.12-mRNA-1:cds-2016354Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto2016355auto2016355Tigriopus kingsejongensispolypeptide
Tk05880Tk05880Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk05880

>Tk05880 ID=Tk05880|Name=Tk05880|organism=Tigriopus kingsejongensis|type=polypeptide|length=1160bp
MPKGKYTVNAGSAPSGGAQKRAKMSDSEVATLLADMEEEDVHDFGANRSD
GPRSDWLRPPLPPIQPSTDKIVFQQIEIDHYLGSHKRGMPGNLSGSVPIM
RMYGVTKQGNSVCCHVHGFHPYFFVPAPAGFETKNLGEFRMALNKALHDD
IKGKDAPSECVLSVDLMQKSTIYGFQGNKMIPFLKITLAVPRMIAAAKRL
LERQEVKFQTLNSNTVFTAYEANIDFEIRFMADTKVVGCNWIELPSGKYQ
VRDGKIERLMSRCQIEVDVAWDSFISHAPEGDWSDVAPFRILSFDIECAG
RKGIFPEPEKDPVIQIASMVIRQGDPEPFIRNVFTLNTCGEIVGSEVIPC
KTETELLDRWSEFVRQADPDLLTGYNINNFDMPYLLNRAKHLNVRNFNLL
GRVIDTRSVIKDTILQSKQMGKRENKVVNTEGRVQLDLLLILIRDYKLRS
YTLNAVSYHFLQEQKEDVHHSVITDLQNGNAQTRRRLAVYCLKDAYLPLR
LLEKLMCVINYMEMARVTGVPLSYLQTRGQQIKVISQLIRKTMEVDILIP
TYQSQQGDDNFEGATVIEPKRGYYDKPIATLDFSSLYPSIMMAHNLCYTT
LLQPGAIEKYGIAPDQYVKTPSGNYFVKSSVRKGLLPEVLESLLGARKKA
KTALKKETDPFKQKVLDGRQLALKISANSVYGFTGAQVGKLPCLEISQSV
TAFGRMMIEQTKNEVEAKYTIANGYEHDAVVIYGDTDSVMVKFGVPTVKE
AMALGEEAAATISEKFIKPIKLEFEKVYFPYLLINKKRYAGLYFTQPDKY
DKMDCKGIETVRRDNCQLVARLMNDCLQKILIDRDPNGAMEYAKQNISDL
LCNRVDISQLVITKELTKTDKDYTAKQAHVELANKMRKRDAGSAPKLGDR
VPYVIVAGAKGTPAYQKAEDPIYVLENNIPIDAQHYLTNMLAKPLLRIFE
PILGETKAESTLLRGEHTRTKTVVTSKVGALAAFTKKRATCIGCKDPIYV
LENNIPIDAQHYLTNMLAKPLLRIFEPILGETKAESTLLRGEHTRTKTVV
TSKVGALAAFTKKRATCIGCKVPLPKDTDAVCVHCQPRESALYQKHISEL
SALEDRFSRLWTQCQRCQGSLHEEVLCTSRDCPIFYMRKKIQIDLTEKDK
VLQRFGVPEW
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mRNA from alignment at scaffold38_size502422:311963..318043-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold38_size502422-processed-gene-3.12-mRNA-1 ID=snap_masked-scaffold38_size502422-processed-gene-3.12-mRNA-1|Name=snap_masked-scaffold38_size502422-processed-gene-3.12-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=6081bp|location=Sequence derived from alignment at scaffold38_size502422:311963..318043- (Tigriopus kingsejongensis)
ATGCCCAAGGGCAAGTACACCGTCAATGCGGGCTCAGCCCCGTCGGGAGG
GGCCCAGAAGCGGGCCAAGATGAGCGACAGCGAGGTGGCGACCTTGCTGG
CCGATATGGAGGAAGAAGACGTGCACGACTTTGGTGCCAATCGCTCCGAT
GGACCCCGCTCGGATTGGTTGCGTCCACCCCTGCCGCCGATCCAGCCCTC
GACGGATAAGATTGTGTTCCAACAGATCGAGATCGATCACTACTTGGGCA
GTGAGTTTCATGCTGAGCTTCTCGCGAGGGCAATCGGGGTAGTTAATATT
CCTGGCTCTATTTTTTAGGTCATAAGCGAGGCATGCCAGGCAATCTATCG
GGTTCTGTGCCCATCATGCGAATGTATGGCGTCACCAAACAGGTACCTAC
AAATGACTGGCTGGGCTAGTGTGCGGTTATCTCGGAAGTGAATTTGGGCC
CACTTTATCGCTCGGAAGATCAATAACTGGTGGCTGGGAAAAGCTCCATT
AAGTTGTGTTTGAATGTTCCAACAGTAAGATTGAAAAGAGATACATTAAT
GCCACGTTGGTATTTTTAAGTCAGACTTTAAACCCCCAACGACCAAAAAC
AGACTTTCTCTTGATGCATTTGGTCAAGAACGCCAATGACAAATGTCACC
TCGAAAGTGTGCCCACAATTGAAGTTCACGTTTCATTATCGACGTCATTT
AGTCAGCAAAAAGTAATTACTTCCCCACTGAGCCTGTCATAGTCATATCG
TTACCTGTTCTCATTACCTGGCATGCAAGTACGACCAGGGGTGTAAAATA
TCTATACCACTTTCCTTTCCTTATCCGGGACAATATTTATTGGCGACAAT
GTCTTGGGCCATAACCACTAGCACTTAGCCTTTGTGCAAATCAACGCTAC
TACTACTACTACTACAACAGTTTTGGCCCTCGGATGAATCCTGCTCAGCC
TAAAAATGCGATCAAGTGCCTGTGTTTCCCCAATGACGATACAATGCCCC
AGCCCTATTGTAGCTATACCGATTCCGTCAAAAAAAGCCCATATCCGGCC
TGCCCCGTAGGTCCAAATGTACTAATGGTTCCGATTGATTTATTTCCCCT
CTAATTGTGGACCCAAATCCCAACTGTCCTGTTGAGCGAGTGTCAAGCTA
ATACCGATTGATTCTTCTGTGTTTAGGGCAATTCCGTGTGCTGTCACGTC
CACGGATTCCATCCCTATTTCTTTGTTCCGGCTCCGGCTGGCTTCGAGAC
GAAGAACTTGGGCGAGTTTCGCATGGCTTTGAATAAGGCTCTACACGATG
ATATTAAGGGCAAGGACGCACCCTCTGAGTGCGTGCTCAGTGTGGATCTC
ATGCAGAAATCCACCATCTACGGCTTTCAGGTGGGACGTGTCTTTCTCAT
TGTTTCTTTTCCTCGCTTAACTCCCAATTTGGTGTGGGCAGGGCAACAAG
ATGATTCCGTTTCTCAAGATCACCTTGGCCGTACCGCGGATGATTGCGGC
CGCCAAGCGGCTCTTGGAGCGGCAAGAGGTCAAGTTCCAAACATTGAACT
CCAACACCGTCTTCACTGCGTATGAGGCCAACATTGACTTTGAGATTCGA
TTCATGGCCGACACCAAAGTGGTCGGGTGTAACTGGATTGAGCTCCCGAG
TGGGAAATACCAAGTTCGGGATGGTGAGGCTCCTTCGTCCGTTCCCAGCC
CCTGCCATTTTGAAAACTAACCCCGACCGTTTTCCTATTTTCGATGACAG
GCAAGATCGAACGACTGATGTCTCGCTGCCAGATCGAGGTCGACGTGGCT
TGGGATAGCTTCATTTCCCATGCTCCCGAGGGAGACTGGTCAGATGTGGC
TCCATTCCGCATCTTGAGTTTCGACATCGAGTGTGCGGGGAGGAAAGGCA
TCTTCCCCGAGCCGGAAAAGGATCCTGTCATCCAAATCGCTTCCATGGTG
ATTCGCCAGGTAAGGTCGTTACGTCATCTCATGATTGCCCATGAGCCAAA
TACAGTTTCTTTTTCACCCATGGATTTCCAGTCGGCCGAATTACAGGTAG
ACAATATCCGTGCCTAAAGTATGGGAGTTCATCTGTTCTTTGAGAAAGTT
ACACTATATTATTCGGCATGGACCATATAAAAACGGCGTTTGATCATGCT
TTTCAAGTTCTTGTTCGACAGGATTGTTTTGCGAACTATTTGTGGTGTCC
ATTTGTTTGGAGTTGTTCAAGTGCGAGGGACTCTTGCATTGTTGCACTAC
GTTCAATTCTCCAATTTCAGGGCGATCCGGAGCCTTTTATTCGCAACGTC
TTCACATTGAACACATGCGGGGAAATCGTTGGGAGCGAGGTGATTCCTTG
CAAGACCGAGACGGAGCTTTTGGATCGCTGGTCCGAGTTTGTCCGACAAG
CAGATCCCGATCTCTTGACCGGCTACAACATCAACAACTTTGATATGCCT
TATTTACTCAATCGGTAAATGACCCACCCGCATTGAATGGAATAGCCTAA
TCAATGAGCTGGATGCATGTTTTCAGGGCCAAGCATTTGAATGTGAGGAA
CTTCAATCTCTTGGGCCGAGTGATCGATACCAGGTCGGTCATCAAGGACA
CCATTCTTCAGAGCAAGCAGATGGGCAAACGCGAGAACAAGGTGGTCAAT
ACTGAGGGCAGAGTCCAACTGGATCTACTGCTAATTCTGATCAGGGACTA
CAAGCTGAGGAGCTACACGCTCAATGCAGTGTCTTACCACTTCCTCCAGG
TGAGGACGTTCAACATATTGAACAATTGCAGCCTCGGAATTTAAATATGC
TCAATTCGTGGTTTCAAGGAACAAAAAGAAGATGTCCATCACTCGGTGAT
TACCGACCTACAAAATGGAAACGCTCAAACACGTCGACGATTGGCGGTTT
ACTGCCTCAAAGATGCCTACTTGCCCCTGCGATTGCTAGAGAAGCTCATG
TGCGTGATCAACTACATGGAAATGGCTAGGGTCACCGGTGTTCCACTGAG
CTATCTTCAAACCAGAGGCCAGCAGATCAAGGTAAGCTCCCACCAAACGA
AGGATTTCGTGACAAGCGAAGTTATTTTTGCCAGCGAAGGATGCCGTTCT
GCATTGGCTCGGAGCTTGATTGTTGAGAGCATTGGCTTTCCAGGTGATTT
CCCAGCTCATTCGGAAGACGATGGAAGTGGACATTCTCATTCCGACCTAT
CAGAGTCAACAAGGTGACGATAACTTCGAGGGAGCAACTGTCATCGAGCC
GAAACGTGGATATTACGACAAGCCAATTGCTACCTTGGATTTCTCGTCCC
TGTATCCGTCGATCATGATGGCGCACAATCTGTGCTACACAACTTTATTG
CAGGTAAATGGCGATTGTACTACAGGGGAGTGTGTGGACTAGTGAGTGGT
TCCGGCTGAAAATAGGCCTTGTCAGGTGGAACGTAGGTTGATGACTGAGT
CCCAGCCTCGAGGCCGTTGAGATCGGCTACTTGTTCCTGGAACAATGCTC
AATTATTTGGGGCTGTAATCTGGTTTTGAGTCCAGCTGGCTTGCCTGATC
CGATTCTTGCTTGCACTTGACGTATTTCCGGAGCAAAACGAACAAGATGG
CGGTAATGATGACCATGCCACCCAAAGCCATGGCACCCGGCAGAAATGTA
GGCGAGGAGCATCCTCCGTTGGAACAGTCACTGTTCCCAAGTCGGGTGGA
GGTTAGGAGGGTTCCGGCAGCGATGCTCATCGTCAAGGGCTATGGATTTG
AGAACTAGCCACGAACGATGTTATTTTGTCCCTTCATTGTGGTTTGAAAT
CTGAAGAACCTTTGAGAAAGTATCGTCCGAGAGTTGGGACAAGGCTTCGA
GACAGGTAAAAGTACAGGAATAGCAACAATACCACGAGATTTTGCTCCAG
TCGGTTCACCTTTAAATGTCAATGGGACTGAGCAACATTCCTTTCAGCCT
GGAGCCATTGAGAAGTATGGGATTGCACCAGATCAATATGTGAAGACTCC
GTCAGGGAACTACTTTGTCAAGTCATCGGTTCGGAAAGGGCTCCTACCCG
AAGTCTTGGAGTCCCTCTTGGGAGCCAGGAAGAAGGCCAAGACCGCGCTG
AAGAAGGAGACCGATCCATTTAAGCAGAAGGTGAGATCATAGTGGGGCGA
AGGTCCTCCCCCGGATCAATTTCACCCTGATCCCCTCGTTCCAGGTCTTG
GATGGTCGTCAATTGGCGTTGAAGATCAGCGCCAACTCCGTGTATGGTTT
TACTGGAGCTCAAGTGGGAAAACTGCCATGTCTGGAGATCTCTCAGAGTG
TCACGGCCTTCGGGCGGATGATGATTGAGCAGACCAAGAACGAGGTTGAG
GCCAAATACACCATCGCCAACGGCTACGAGCACGATGCCGTGGTCATCTA
CGGGGACACGGATTCAGTCATGGTCAAGTTCGGCGTGCCCACCGTCAAGG
AGGCCATGGCTCTGGGCGAGGAGGCGGCCGCCACCATCTCGGAGAAGTTC
ATCAAGCCCATCAAGCTCGAGTTCGAGAAGGTGTACTTCCCCTATTTGCT
CATCAACAAGAAGCGCTACGCTGGATTGTACTTCACCCAACCGGACAAGT
ACGACAAAATGGACTGCAAGGGCATCGAAACCGTGCGACGAGACAACTGC
CAATTGGTGGCTCGTCTCATGAACGATTGTCTCCAGAAGATCCTCATCGA
CCGCGATCCCAATGGTGCCATGGAGTACGCCAAGCAAAACATCTCGGACC
TGCTCTGCAATCGGGTGGACATCTCGCAACTGGTCATCACCAAAGAGCTG
ACGAAAACCGACAAGGATTACACGGCCAAGCAGGCTCACGTGGAGTTGGC
CAACAAGATGCGAAAGCGAGACGCCGGATCTGCCCCCAAATTGGGAGATC
GGGTTCCCTATGTGATCGTGGCTGGAGCCAAAGGCACGCCCGCCTACCAA
AAAGCCGAGGTAATCCGTTTACGCCATCCTCTCACGTTGATGGTGTCCCA
GCGTTTCATGGGCGCTTCCCAACCCCATTCTAGGATCCGATTTATGTGCT
GGAAAACAACATCCCCATCGACGCTCAACACTACCTGACCAATATGCTGG
CCAAGCCGCTGCTCCGCATATTCGAGCCCATTCTGGGCGAGACCAAAGCC
GAGTCCACCCTCCTCCGCGGCGAGCACACCCGCACCAAGACCGTGGTCAC
ATCCAAAGTGGGAGCCTTGGCCGCATTCACGAAGAAAAGGGCCACGTGCA
TTGGGTGCAAGGTAAATATTCCCGTCACATCTTTTCTAGACACAATGTGA
CTGAAATCAAGTCAATGAAGGGGGCGGCNCCCAGCGTTTCATGGGCGCTT
CCCAACCCCATTCTAGGATCCGATTTATGTGCTGGAAAACAACATCCCCA
TCGACGCTCAACACTACCTGACCAATATGCTGGCCAAGCCGCTGCTCCGC
ATATTCGAGCCCATTCTGGGCGAGACCAAAGCCGAGTCCACCCTCCTCCG
CGGCGAGCACACCCGCACCAAGACCGTGGTCACATCCAAAGTGGGAGCCT
TGGCCGCATTCACGAAGAAAAGGGCCACGTGCATTGGGTGCAAGGTAAAT
ATTCCCGTCACATCTTTTCTAGACACAATGTGACTGAAATCAAGTCAATG
AAGGGGGCGGCATCCCATGGGCCTGGCAGGACACTTTTCTGTGATATTGG
AGCACGGAGCTTTCATTGAAAGGTGTGGGCAGGGAATCATTTCAGGACGA
GTTCCATTGGATCTTTGACCTTCCAGGTCCCTCTGCCCAAGGACACCGAT
GCCGTGTGTGTTCATTGCCAGCCTCGCGAGAGTGCATTGTATCAGAAGCA
TATCTCCGAGTTGTCTGCGCTCGAGGACAGATTCTCGCGATTGTGGACTC
AGTGTCAGCGATGTCAGGGTTCCTTGCACGAGGAGGTGTTGTGCACGAGT
CGGGATTGTCCGATTTTCTACATGCGGAAGAAGATTCAGATCGATTTGAC
GGAGAAGGACAAGGTCTTGCAGAGATTCGGAGTGCCGGAGTGGTAGTCGA
TCCGGATCATTTATATTTTTGTGCCTTGCTG
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