snap_masked-scaffold3992_size6957-processed-gene-0.4-mRNA-1, snap_masked-scaffold3992_size6957-processed-gene-0.4-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namesnap_masked-scaffold3992_size6957-processed-gene-0.4-mRNA-1
Unique Namesnap_masked-scaffold3992_size6957-processed-gene-0.4-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold3992_size6957supercontigscaffold3992_size6957:4009..5280 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
udp-n-acetylglucosamine 1-carboxyvinyltransferasesnap_masked-scaffold3992_size6957-processed-gene-0.4Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
snap_masked-scaffold3992_size6957-processed-gene-0.4-mRNA-1:exon:1449snap_masked-scaffold3992_size6957-processed-gene-0.4-mRNA-1:exon:1449Tigriopus kingsejongensisexon
snap_masked-scaffold3992_size6957-processed-gene-0.4-mRNA-1:cdssnap_masked-scaffold3992_size6957-processed-gene-0.4-mRNA-1:cdsTigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1955438auto1955438Tigriopus kingsejongensispolypeptide
Tk04613Tk04613Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk04613

>Tk04613 ID=Tk04613|Name=Tk04613|organism=Tigriopus kingsejongensis|type=polypeptide|length=423bp
MDAILVRGGGPLNGSIPIAGAKNACLTLMPATLLSEEPLTLTNAPRLSDI
RTMTQLLQSLGAEISTLQEGRVISMSCHGEINTRAEYDIVRKMRASNLVL
GPLLAREGYAEVSLPGGCAIGARPMDIHTNGLEKMGATIDLRDGYLYAKA
EGGRLKGAVIDFPFASVGATENIMMAATLAKGTTVINNAAREPEIVDLAD
CLRRMGAQIEGDGTSTITIQGVDRLGAATHPVVTDRIELGTYMLAPAICG
GEVELLGGRIDLIGAFCEKLDLAGIEVTETDKGLKVKRRGDRVSAVDVTT
EPFPGFPTDLQAQMMALLCTAEGTSTLEEKIFENRFMHAPELIRMGAKVE
VHGGKAVVTGVKKLKGAPVMATDLRASVSLILAGMAAEGETKVSRVYHLD
RGYEHVVTKLRGVGADIERIKDE
back to top

mRNA from alignment at scaffold3992_size6957:4009..5280-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold3992_size6957-processed-gene-0.4-mRNA-1 ID=snap_masked-scaffold3992_size6957-processed-gene-0.4-mRNA-1|Name=snap_masked-scaffold3992_size6957-processed-gene-0.4-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=1272bp|location=Sequence derived from alignment at scaffold3992_size6957:4009..5280- (Tigriopus kingsejongensis)
ATGGACGCAATTCTGGTACGCGGTGGCGGGCCGCTTAATGGCTCAATCCC
GATTGCGGGGGCCAAGAACGCTTGCCTCACGCTGATGCCCGCGACACTGC
TGAGCGAAGAGCCGCTGACGCTCACCAATGCGCCGCGCTTGTCGGATATC
CGCACAATGACGCAACTGTTGCAGTCGCTGGGCGCTGAAATCAGCACGCT
GCAAGAGGGCCGTGTGATTTCCATGTCGTGCCACGGCGAGATCAATACGC
GCGCCGAATATGACATCGTGCGCAAAATGCGCGCGTCCAACCTTGTGCTG
GGTCCGCTGCTGGCGCGCGAGGGCTATGCCGAAGTGTCCCTGCCAGGTGG
GTGCGCCATTGGCGCGCGCCCTATGGATATCCACACCAACGGTCTGGAGA
AAATGGGCGCCACAATCGATCTCCGCGATGGCTACCTCTATGCCAAGGCT
GAAGGCGGTCGCCTTAAGGGCGCCGTGATCGACTTTCCTTTCGCCTCTGT
CGGGGCGACCGAGAACATTATGATGGCCGCAACTTTGGCCAAAGGCACAA
CCGTGATCAACAACGCCGCGCGCGAGCCGGAGATTGTGGACCTTGCCGAT
TGCTTGCGCCGCATGGGCGCGCAGATCGAGGGCGATGGCACCTCGACCAT
CACCATTCAGGGCGTTGACCGTCTGGGTGCCGCAACCCACCCCGTCGTGA
CCGACCGGATCGAGTTGGGTACTTACATGCTGGCCCCCGCCATCTGCGGC
GGCGAGGTTGAGCTGCTGGGTGGCCGGATCGATCTGATCGGCGCGTTCTG
CGAAAAGCTGGACCTTGCTGGCATCGAAGTGACCGAAACCGATAAAGGTC
TCAAGGTGAAACGCCGTGGCGACCGTGTCAGTGCCGTTGACGTCACAACC
GAGCCTTTCCCCGGCTTCCCGACCGACCTTCAGGCGCAGATGATGGCGCT
GCTGTGCACCGCCGAAGGCACCTCGACGCTGGAAGAGAAAATCTTCGAGA
ACCGCTTTATGCACGCGCCCGAGCTGATCCGCATGGGCGCCAAGGTCGAA
GTACATGGCGGCAAGGCGGTTGTGACGGGTGTGAAAAAGCTGAAAGGCGC
GCCTGTGATGGCGACCGATCTGCGCGCGTCTGTTTCGCTGATTCTTGCGG
GCATGGCGGCTGAGGGCGAGACGAAAGTCTCCCGCGTCTACCACCTTGAT
CGCGGGTACGAGCATGTTGTGACCAAGCTGCGCGGCGTGGGCGCGGACAT
CGAGCGGATCAAAGACGAATGA
back to top
Add to Basket