snap_masked-scaffold405_size181423-processed-gene-0.0-mRNA-1, snap_masked-scaffold405_size181423-processed-gene-0.0-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namesnap_masked-scaffold405_size181423-processed-gene-0.0-mRNA-1
Unique Namesnap_masked-scaffold405_size181423-processed-gene-0.0-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold405_size181423supercontigscaffold405_size181423:671..2313 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
facilitated trehalose transporter tret1-like isoform x2snap_masked-scaffold405_size181423-processed-gene-0.0Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
snap_masked-scaffold405_size181423-processed-gene-0.0-mRNA-1:exon:207snap_masked-scaffold405_size181423-processed-gene-0.0-mRNA-1:exon:207Tigriopus kingsejongensisexon
snap_masked-scaffold405_size181423-processed-gene-0.0-mRNA-1:exon:208snap_masked-scaffold405_size181423-processed-gene-0.0-mRNA-1:exon:208Tigriopus kingsejongensisexon
snap_masked-scaffold405_size181423-processed-gene-0.0-mRNA-1:exon:209snap_masked-scaffold405_size181423-processed-gene-0.0-mRNA-1:exon:209Tigriopus kingsejongensisexon
snap_masked-scaffold405_size181423-processed-gene-0.0-mRNA-1:cdssnap_masked-scaffold405_size181423-processed-gene-0.0-mRNA-1:cdsTigriopus kingsejongensisexon
snap_masked-scaffold405_size181423-processed-gene-0.0-mRNA-1:cdssnap_masked-scaffold405_size181423-processed-gene-0.0-mRNA-1:cds-1949402Tigriopus kingsejongensisexon
snap_masked-scaffold405_size181423-processed-gene-0.0-mRNA-1:cdssnap_masked-scaffold405_size181423-processed-gene-0.0-mRNA-1:cds-1949403Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1949404auto1949404Tigriopus kingsejongensispolypeptide
Tk08180Tk08180Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk08180

>Tk08180 ID=Tk08180|Name=Tk08180|organism=Tigriopus kingsejongensis|type=polypeptide|length=490bp
MGCFLNGGVLGYTGPANPSMMSPDSVDAFGNSFSVDLQAVSWITGFLSLG
SFFGGLVAGPIMEKIGRRRMMIVPTSVAFTLGYILIACAMNKYMLYAGRV
VNGIGLGFELSAVTVYIVEIATTDMRGFLGCLVQGMGSLGIVFTFCAGAV
LDWKWLAIANALWVIPFAIGMYFAPESPRWLVLKGKEYSAKKSLEWLRGR
SNPKAIDEEIEAIKRDIAIKKTQRVSITQLKDVWKPFLVAITMMFIVQFS
GFNVLIYYTVNIFQMARSSVNPKFASIIVGFTLLISCIIAIIIVSKLNRK
IMLITSILVMCLSQTVLGYCMYHNEQLQANFDRKLARENITDLQAFLVNK
TEAEVLEYTLENPEWLGWVPLAAVLSFLFFGNGGYGTLIWVVTAEILPPK
VRSVANSVIICFTFLGGFVVSKTFVDLIEAVNQSGTFWIYAGVCLFGLFF
TVICVPETRNVPIDEIQDAFNRPCSQMATDSLCGCCSKKS
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mRNA from alignment at scaffold405_size181423:671..2313+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold405_size181423-processed-gene-0.0-mRNA-1 ID=snap_masked-scaffold405_size181423-processed-gene-0.0-mRNA-1|Name=snap_masked-scaffold405_size181423-processed-gene-0.0-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=1643bp|location=Sequence derived from alignment at scaffold405_size181423:671..2313+ (Tigriopus kingsejongensis)
ATGGGCTGCTTTTTGAATGGCGGCGTGCTCGGATACACGGGGCCGGCCAA
TCCGTCCATGATGTCTCCGGACAGTGTAGATGCCTTTGGCAATAGCTTCA
GTGTGGATCTGCAAGCGGTATCGTGGATTAGTGAGTCTAGGATCAGATAC
ACGTATAATGACAATGAGCTTTGATTGGGAAATTTCTTTTCAGCCGGATT
CTTGAGCTTGGGCTCCTTTTTTGGCGGCCTCGTGGCTGGACCGATCATGG
AGAAAATAGGCCGGCGACGGATGATGATTGTTCCAACGTCGGTGGCATTC
ACCCTGGGATATATCTTGATCGCTTGTGCTATGAATAAGTACATGCTTTA
CGCTGGCAGGTGAGTGGTCCAATTTTCGTGGATCCATTATTTCAGTTGCC
TTACAATGCAATCCACCCGGGTTGGGCATGGAACAGCGCTTAGGAACCGA
TCGTTTCCCATTGCAGAGTGGTAAATGGCATTGGCCTGGGATTTGAGCTC
TCTGCAGTCACCGTCTACATTGTGGAGATTGCCACTACCGACATGAGGGG
CTTTCTGGGTTGCCTGGTCCAGGGCATGGGCTCCTTGGGCATTGTTTTCA
CTTTCTGCGCCGGAGCCGTCCTCGACTGGAAGTGGTTGGCCATCGCTAAC
GCCTTGTGGGTGATCCCATTTGCCATTGGCATGTACTTTGCTCCCGAGAG
TCCACGCTGGCTGGTTCTGAAGGGGAAGGAATACTCGGCAAAAAAGAGTC
TGGAATGGCTCCGCGGGCGGAGCAACCCCAAAGCCATTGACGAGGAAATT
GAGGCCATCAAGCGGGATATCGCCATCAAGAAGACTCAGAGGGTGTCTAT
CACTCAGTTGAAGGATGTGTGGAAGCCGTTTCTTGTGGCTATCACTATGA
TGTTCATCGTCCAGTTCTCGGGCTTTAATGTCCTCATCTACTACACCGTC
AATATCTTCCAAATGGCGCGCAGTAGCGTTAATCCAAAGTTTGCCTCCAT
CATTGTGGGCTTCACTCTGCTGATTTCGTGCATCATCGCCATCATCATTG
TGTCCAAGTTGAACCGCAAGATCATGCTGATCACCTCCATCCTGGTCATG
TGTCTCAGTCAGACAGTCTTGGGCTACTGTATGTACCACAATGAGCAGCT
CCAGGCCAATTTCGATCGAAAGCTCGCCCGGGAGAACATCACAGATCTTC
AGGCCTTTTTGGTCAACAAGACCGAGGCTGAAGTTCTAGAGTACACCCTG
GAGAACCCCGAATGGCTGGGCTGGGTGCCACTGGCGGCCGTGTTGAGTTT
TCTGTTCTTCGGCAATGGCGGCTATGGCACCTTGATCTGGGTGGTCACAG
CCGAGATCCTTCCCCCCAAAGTGCGAAGCGTGGCCAATAGTGTCATCATT
TGCTTCACTTTCCTGGGAGGGTTCGTAGTGTCCAAGACATTTGTGGACCT
CATTGAGGCGGTCAATCAGTCCGGGACATTCTGGATCTACGCCGGAGTCT
GTCTCTTCGGCTTGTTCTTCACGGTGATATGTGTCCCCGAAACCCGAAAC
GTGCCCATCGACGAAATCCAAGATGCTTTCAACAGACCTTGCTCGCAAAT
GGCCACGGACAGCTTATGCGGATGCTGTAGCAAAAAGTCATAG
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