snap_masked-scaffold405_size181423-processed-gene-0.1-mRNA-1, snap_masked-scaffold405_size181423-processed-gene-0.1-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namesnap_masked-scaffold405_size181423-processed-gene-0.1-mRNA-1
Unique Namesnap_masked-scaffold405_size181423-processed-gene-0.1-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold405_size181423supercontigscaffold405_size181423:3102..4413 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
facilitated trehalose transporter tret1-like isoform x2snap_masked-scaffold405_size181423-processed-gene-0.1Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
snap_masked-scaffold405_size181423-processed-gene-0.1-mRNA-1:exon:205snap_masked-scaffold405_size181423-processed-gene-0.1-mRNA-1:exon:205Tigriopus kingsejongensisexon
snap_masked-scaffold405_size181423-processed-gene-0.1-mRNA-1:exon:206snap_masked-scaffold405_size181423-processed-gene-0.1-mRNA-1:exon:206Tigriopus kingsejongensisexon
snap_masked-scaffold405_size181423-processed-gene-0.1-mRNA-1:cdssnap_masked-scaffold405_size181423-processed-gene-0.1-mRNA-1:cdsTigriopus kingsejongensisexon
snap_masked-scaffold405_size181423-processed-gene-0.1-mRNA-1:cdssnap_masked-scaffold405_size181423-processed-gene-0.1-mRNA-1:cds-1953258Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1953259auto1953259Tigriopus kingsejongensispolypeptide
Tk08179Tk08179Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk08179

>Tk08179 ID=Tk08179|Name=Tk08179|organism=Tigriopus kingsejongensis|type=polypeptide|length=415bp
MSLGCFFGCIVCGPVMEKLGRKPTLMLVTNGIFILGYMLIFLALNEGMLL
TGRFFTGSGLGFAIAVCTVYVIEITSTDMRSSLGCFVQLFGTLGVLYTFS
LGAFLDWYFLALANLAFVPPLAIGMLFVPESPRWLILQGREVGARESLEW
LRGRGNDEWIQAEIDKIKRDVALDRKNRITLRDLQQAWRPFALSLGLMFL
AQFCGLSVLIYYTVSIFNVARSSVDPRMASILVGLTLVLSSGFAVLIVPR
LNRRLIVLTSLMCMTMCMVVLGTCLYFIEQTPPEEDLAPPLGWLPVVTVL
LFLFVGNGGFETLIWILTAELLPPKVRSVANSLAICFAFLVGFVVSKTFV
DLVTAIRNSGAFWLYAAINLAGFFLLAYFLPETKDRSIEEIQKKFTRITR
VSTNPDYEELVGTTS
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mRNA from alignment at scaffold405_size181423:3102..4413+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold405_size181423-processed-gene-0.1-mRNA-1 ID=snap_masked-scaffold405_size181423-processed-gene-0.1-mRNA-1|Name=snap_masked-scaffold405_size181423-processed-gene-0.1-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=1312bp|location=Sequence derived from alignment at scaffold405_size181423:3102..4413+ (Tigriopus kingsejongensis)
ATGAGCCTGGGCTGCTTTTTCGGCTGCATTGTTTGCGGCCCGGTCATGGA
GAAGCTGGGACGGAAGCCCACTCTCATGCTGGTGACCAATGGGATTTTCA
TCCTGGGCTACATGCTCATTTTTCTGGCCCTCAACGAGGGGATGCTCCTC
ACCGGAAGGTATATCTATGTTCCGTGTGATTCGATATCGGCAGCCCCCTT
TACGATAATCTGTCGAGTCTAGATTCTTCACAGGCAGTGGTTTGGGCTTC
GCCATTGCCGTCTGTACGGTGTACGTGATTGAAATCACGTCCACGGACAT
GAGGAGCAGCCTGGGATGCTTTGTCCAGCTCTTTGGTACATTGGGCGTTC
TGTACACGTTCTCCTTGGGCGCCTTCCTGGATTGGTACTTCCTGGCCTTG
GCCAATCTCGCCTTCGTTCCGCCTCTGGCCATTGGGATGCTCTTCGTGCC
CGAGAGTCCCCGGTGGCTTATCCTCCAGGGGCGCGAGGTCGGGGCCAGAG
AGAGCTTGGAATGGCTACGAGGCAGAGGCAACGACGAGTGGATCCAGGCC
GAGATCGACAAGATCAAGCGCGATGTTGCCTTGGATAGGAAGAATCGGAT
CACTCTTCGGGACCTCCAGCAAGCCTGGCGCCCGTTCGCCCTGTCCCTCG
GACTCATGTTTCTCGCCCAATTCTGCGGCCTCAGTGTGCTCATCTACTAC
ACTGTGAGCATCTTCAACGTGGCCCGATCCTCGGTGGACCCGCGGATGGC
CTCCATACTGGTGGGCCTCACTCTGGTGCTCTCCAGTGGCTTTGCCGTCT
TGATCGTGCCAAGGCTGAACCGCCGACTCATCGTGCTCACCTCGCTCATG
TGCATGACCATGTGCATGGTCGTCTTGGGCACCTGCCTCTACTTCATAGA
GCAGACTCCCCCTGAGGAGGACCTGGCCCCACCCTTGGGCTGGCTTCCCG
TGGTCACCGTCCTCCTATTTCTCTTCGTTGGGAACGGCGGATTTGAAACT
CTCATTTGGATCCTCACGGCCGAACTCCTCCCGCCAAAAGTGAGGAGTGT
GGCCAATTCCCTCGCGATTTGCTTCGCCTTTCTGGTGGGTTTCGTGGTGA
GCAAGACGTTCGTGGATTTGGTGACCGCCATTCGGAACTCTGGCGCCTTT
TGGCTCTATGCCGCCATCAATTTGGCGGGCTTTTTTCTCCTAGCCTATTT
CCTGCCCGAGACCAAAGATCGCTCGATTGAGGAGATCCAGAAGAAATTTA
CGCGGATCACTAGGGTGTCCACGAATCCTGACTACGAGGAGCTCGTGGGA
ACAACCTCGTGA
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