snap_masked-scaffold417_size177606-processed-gene-0.5-mRNA-1, snap_masked-scaffold417_size177606-processed-gene-0.5-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namesnap_masked-scaffold417_size177606-processed-gene-0.5-mRNA-1
Unique Namesnap_masked-scaffold417_size177606-processed-gene-0.5-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold417_size177606supercontigscaffold417_size177606:52257..53489 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
speckle-type poz isoform x2snap_masked-scaffold417_size177606-processed-gene-0.5Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
snap_masked-scaffold417_size177606-processed-gene-0.5-mRNA-1:exon:215snap_masked-scaffold417_size177606-processed-gene-0.5-mRNA-1:exon:215Tigriopus kingsejongensisexon
snap_masked-scaffold417_size177606-processed-gene-0.5-mRNA-1:cdssnap_masked-scaffold417_size177606-processed-gene-0.5-mRNA-1:cdsTigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1979762auto1979762Tigriopus kingsejongensispolypeptide
Tk07599Tk07599Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk07599

>Tk07599 ID=Tk07599|Name=Tk07599|organism=Tigriopus kingsejongensis|type=polypeptide|length=410bp
MWNHSFFSESRSSTPRNSRSSHPITTGKHEWTIEDFLTREEGVGVSLNTK
FSVPANEVRSGTMVETVWRIKVYPRGCDAEHANYASIFINQAAGPAVWVK
YAFCILGASSHAGTGVDSSGFQRGTPSEHNTRVGSVQFLADRRNSSRGWK
KFICLSLLRAPSNPYLQEANLVIRCTVELECRDQLHPNAASLTGGLSSAS
SLTQVGPSSESAALSRLPSSLSSTSSTSSSPATLLSQEGRISHLEDMKYT
DLALVCEGREFPCHKFMLARKSDVFDAMFSHEFRESVSNQVHITDLDADS
VQEMIRFLYIGRVWHMDRVNRGLFVTADKYNIGELKEACEKSLSSTMSVG
NVCSLLLFARDRMADQLKKKAIEFISRNSVDVTNSDGWKDLVHEPTLVTE
VVQAMGPKYL
back to top

mRNA from alignment at scaffold417_size177606:52257..53489+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold417_size177606-processed-gene-0.5-mRNA-1 ID=snap_masked-scaffold417_size177606-processed-gene-0.5-mRNA-1|Name=snap_masked-scaffold417_size177606-processed-gene-0.5-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=1233bp|location=Sequence derived from alignment at scaffold417_size177606:52257..53489+ (Tigriopus kingsejongensis)
ATGTGGAACCACAGCTTCTTCAGCGAGAGCCGCAGTAGCACGCCCAGGAA
CTCGCGCTCCTCCCACCCCATCACCACGGGCAAGCATGAGTGGACGATTG
AGGACTTCCTCACGCGCGAGGAAGGGGTGGGCGTGTCGCTCAACACCAAG
TTCTCGGTGCCCGCTAATGAGGTGCGTTCCGGGACCATGGTGGAAACGGT
GTGGCGCATTAAGGTCTACCCCCGGGGCTGCGACGCCGAGCACGCCAATT
ATGCTTCCATCTTCATCAATCAGGCGGCGGGTCCGGCCGTGTGGGTCAAG
TACGCCTTCTGCATCCTGGGCGCCTCGTCCCACGCGGGCACGGGCGTGGA
TTCGAGTGGCTTTCAGCGGGGCACACCGAGTGAGCACAACACGCGGGTCG
GCTCGGTCCAGTTCCTGGCCGATCGGCGGAATAGTTCGCGCGGCTGGAAA
AAGTTCATCTGTCTGAGCCTCCTCCGAGCTCCGTCCAACCCTTACCTGCA
GGAGGCTAACCTCGTCATCCGCTGCACGGTCGAGCTCGAGTGTCGGGACC
AGCTCCATCCGAATGCGGCCAGTCTCACGGGCGGCCTGAGCTCGGCCTCG
TCTCTGACCCAGGTAGGGCCCAGTTCCGAGAGTGCTGCCCTGTCTCGCCT
GCCCTCCTCTTTGTCGTCCACCTCATCCACCTCCTCGTCGCCGGCCACCC
TTCTGAGCCAGGAAGGCCGGATCAGCCATCTCGAGGACATGAAGTACACG
GACCTGGCCCTGGTCTGCGAAGGACGCGAGTTTCCGTGTCACAAGTTTAT
GCTGGCCCGCAAGTCGGATGTGTTTGACGCCATGTTTAGTCACGAGTTCC
GGGAGTCGGTCTCGAATCAAGTCCACATCACGGACTTGGATGCCGACTCG
GTGCAAGAAATGATTCGCTTCCTCTACATTGGGCGTGTTTGGCACATGGA
CCGGGTCAATCGCGGTCTCTTTGTGACTGCCGACAAGTACAACATTGGCG
AGCTCAAGGAAGCTTGCGAGAAGTCGCTGAGCTCGACCATGAGCGTGGGG
AACGTGTGCTCGCTCCTCCTCTTTGCCCGCGACCGCATGGCCGACCAGCT
CAAGAAGAAGGCCATCGAGTTCATATCGCGAAACTCCGTCGACGTCACCA
ATTCGGACGGGTGGAAGGATCTGGTCCACGAGCCCACCCTGGTCACCGAA
GTGGTGCAGGCGATGGGACCCAAATACTTATAA
back to top
Add to Basket