snap_masked-scaffold421_size176100-processed-gene-0.20-mRNA-1, snap_masked-scaffold421_size176100-processed-gene-0.20-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namesnap_masked-scaffold421_size176100-processed-gene-0.20-mRNA-1
Unique Namesnap_masked-scaffold421_size176100-processed-gene-0.20-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold421_size176100supercontigscaffold421_size176100:134913..137921 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
b-cell lymphomasnap_masked-scaffold421_size176100-processed-gene-0.20Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
snap_masked-scaffold421_size176100-processed-gene-0.20-mRNA-1:exon:117snap_masked-scaffold421_size176100-processed-gene-0.20-mRNA-1:exon:117Tigriopus kingsejongensisexon
snap_masked-scaffold421_size176100-processed-gene-0.20-mRNA-1:exon:118snap_masked-scaffold421_size176100-processed-gene-0.20-mRNA-1:exon:118Tigriopus kingsejongensisexon
snap_masked-scaffold421_size176100-processed-gene-0.20-mRNA-1:exon:119snap_masked-scaffold421_size176100-processed-gene-0.20-mRNA-1:exon:119Tigriopus kingsejongensisexon
snap_masked-scaffold421_size176100-processed-gene-0.20-mRNA-1:cdssnap_masked-scaffold421_size176100-processed-gene-0.20-mRNA-1:cdsTigriopus kingsejongensisexon
snap_masked-scaffold421_size176100-processed-gene-0.20-mRNA-1:cdssnap_masked-scaffold421_size176100-processed-gene-0.20-mRNA-1:cds-2000572Tigriopus kingsejongensisexon
snap_masked-scaffold421_size176100-processed-gene-0.20-mRNA-1:cdssnap_masked-scaffold421_size176100-processed-gene-0.20-mRNA-1:cds-2000573Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto2000574auto2000574Tigriopus kingsejongensispolypeptide
Tk10563Tk10563Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk10563

>Tk10563 ID=Tk10563|Name=Tk10563|organism=Tigriopus kingsejongensis|type=polypeptide|length=910bp
MWSSCGFSDLILLDKKRFFLSLNNDKEPTHFTCSTCRKKFDSAWQLVQHA
QASHGLLICGDRSAAVTAAAAVAAVNGGSGFLPGHHMSGLNGRRMGPTPP
VSGGALAPTSPFAPLPGLDPHFGLLRMPLGERGPFPGASGPLGAFPRPPV
SSHHDFRMEQLMSMNSHLGLPNPFERTPLFGAATSHHSAATATSTTSSVM
GLASLAAGSPPAGLDAQSLDFYSQRLKQLAGGSSSPEPIRRTTTPSFSSP
TSGVSEKEKRNNNYPHSNSSTPRPNPPQTPTDSVKSDSLKPSPSDDKENK
RSSPVSSECAPDSSDRANGTASENDKHSSGSVDEELMDDAMEEEEAEDLT
TKSMSTPTSTPTTTPVPSSSSERMASNGSMLGDLMSKFGFSDIQEYQEAY
RKALQESGAKLNDRSNNNVDDLRSKTPQENGEKPLRLREDITKNVPAVNS
LDLANPYMGFGYDAAKRLKLERESQNSLFAGLWMPTANQNLYRNLGRVHH
HHHQHHSLEQGNSQSKEDKLVRRGGKRSSINDIDLPPLPPGVTLPPMEPS
ALKAIAQKGRLSALFDPAARRDITGRNRNDTCEFCGKVFKNCSNLTVHRR
SHTGEKPYKCELCNYACAQSSKLTRHMKTHGRLGKDIYKCRFCDMPFSVP
STLEKHMRKCVVNANKHKHHRNANENSASFMSSLLSGAAANAAAVAAAAA
NLRGAADSPSAILSGSENSVDSTKDLPSPALPHDLSLSNSSTAVSPGGMV
LSPSSHHHNLSGQQQQQQQQQAAALQAAAAFFRGFQGAGGSARFPPVGAS
GGQSGGFPSPMTAAAARALTTSLHHLPSSLSSSGTLSTMSLASGTSPAII
GQGLTSRLSSSASAAMAAAVVAASSASSSSPSVLPPPPPMIPRPTSRGGG
PLSPRFGIFS
back to top

mRNA from alignment at scaffold421_size176100:134913..137921-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold421_size176100-processed-gene-0.20-mRNA-1 ID=snap_masked-scaffold421_size176100-processed-gene-0.20-mRNA-1|Name=snap_masked-scaffold421_size176100-processed-gene-0.20-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=3009bp|location=Sequence derived from alignment at scaffold421_size176100:134913..137921- (Tigriopus kingsejongensis)
ATGTGGAGCAGTTGCGGCTTCTCCGACTTGATCTTGCTTGACAAGAAGAG
ATTCTTCCTCTCCTTAAACAATGACAAAGGTGACCACCGTAGAATATGAT
GGCTAGATGATCTTGGTCATGCTTCAAAAGAGATGCAAAAGTTGGACAAT
GGCTGCCAGTTGCATTCTCCTTCGCAGTAGTCGATGGCAGAACAAACCGA
AACCGACTGATTTCAATTGCATTCACAGTTTTCAACGGGACTCTTTTCTT
TTTTTCCAGAACCCACCCACTTCACATGCTCGACTTGCCGCAAGAAGTTC
GATTCCGCCTGGCAACTAGTTCAACACGCCCAGGCCTCCCACGGTCTTCT
CATCTGCGGGGATCGCTCGGCCGCCGTCACGGCTGCTGCCGCCGTGGCCG
CCGTCAACGGAGGCTCAGGTTTCCTTCCAGGCCATCACATGTCCGGCCTG
AACGGTCGAAGGATGGGTCCCACACCACCGGTTAGTGGGGGAGCCCTCGC
TCCCACATCGCCATTCGCACCGCTGCCCGGTTTGGATCCCCACTTTGGTC
TCCTCAGGATGCCCTTGGGCGAGCGAGGTCCCTTCCCGGGGGCTTCCGGA
CCTTTGGGAGCCTTTCCCCGCCCACCCGTGTCTAGTCATCACGATTTCAG
AATGGAACAGCTCATGTCCATGAACTCCCATCTCGGCCTGCCCAACCCGT
TTGAGCGGACGCCGCTCTTTGGAGCCGCCACCTCCCACCACTCGGCAGCC
ACGGCCACCTCCACTACCAGCTCGGTCATGGGTCTGGCCAGCTTGGCTGC
TGGATCTCCCCCGGCTGGGCTAGATGCCCAGAGCTTGGATTTCTATTCCC
AAAGGCTGAAACAATTGGCAGGGGGGTCGTCTAGTCCAGAGCCGATCCGG
CGGACCACAACACCCTCATTTTCGTCGCCCACCAGCGGCGTGTCGGAGAA
GGAGAAGCGGAACAACAACTACCCTCATTCCAACTCGAGCACGCCTAGAC
CCAATCCTCCCCAAACCCCCACGGACTCTGTCAAGTCTGATTCTCTAAAG
CCATCTCCGTCAGATGACAAGGAGAACAAGAGGAGCAGCCCCGTCTCGTC
TGAATGCGCACCAGATTCTAGTGACAGGGCCAATGGAACAGCCAGTGAGA
ATGACAAGCACTCTTCTGGATCAGTGGACGAGGAGCTCATGGATGATGCC
ATGGAGGAGGAGGAGGCCGAGGACTTGACGACCAAGTCCATGTCAACGCC
CACTTCCACTCCGACGACCACACCGGTGCCCAGCTCGTCCTCTGAGCGCA
TGGCTTCCAACGGGTCCATGCTCGGCGATCTGATGAGCAAGTTCGGCTTC
AGTGACATCCAAGAGTATCAGGAGGCATATCGCAAGGCCTTGCAAGAGTC
GGGAGCCAAACTGAACGACAGGTCCAACAACAACGTCGATGACCTCAGAT
CCAAGACTCCCCAGGAGAATGGCGAAAAGCCTTTGAGATTGCGTGAGGAC
ATCACCAAGAATGTGCCTGCCGTCAATTCCCTGGATCTGGCCAATCCTTA
CATGGGTTTTGGCTATGACGCGGCCAAGCGGCTGAAACTGGAGCGTGAAA
GTCAGAACAGTCTGTTTGCCGGTCTTTGGATGCCGACCGCGAACCAAAAC
CTGTATCGAAACCTGGGCAGGGTTCATCATCACCACCATCAGCATCACAG
CCTCGAGCAGGGTAACAGTCAAAGTAAGGAGGACAAACTGGTTAGACGAG
GAGGCAAACGCTCGTCCATCAATGACATTGACCTTCCTCCCTTGCCTCCA
GGTGTGACCCTTCCTCCCATGGAACCCTCTGCATTGAAGGCCATCGCCCA
AAAGGGCCGCCTGAGTGCCCTCTTTGACCCTGCCGCTCGACGCGACATCA
CAGGGAGGAACCGGAACGACACGTGCGAGTTCTGTGGAAAGGTGTTCAAA
AACTGTTCCAACCTCACCGTTCACCGCCGCTCTCATACTGGTGAAAAGCC
TTACAAGTGTGAGCTGTGCAACTACGCCTGTGCCCAAAGTTCAAAGCTAA
CCCGTCACATGAAGACTCATGGCAGGCTGGGGAAGGACATTTACAAATGC
CGCTTCTGCGACATGCCCTTCAGTGTGCCATCCACATTGGAGAAGCACAT
GCGCAAGTGTGTAGTCAACGCCAACAAGCACAAGCACCATCGCAACGCCA
ACGAGAACAGTGCCTCGTTCATGTCATCCCTGTTGTCGGGTGCTGCGGCC
AATGCCGCTGCCGTGGCTGCTGCGGCAGCCAATCTCCGGGGGGCTGCCGA
CAGTCCCTCCGCTATCCTCTCTGGGTCAGAAAACTCCGTTGATAGTACCA
AAGATCTCCCCTCCCCGGCCCTTCCCCACGACCTGTCCCTCTCGAACAGT
TCAGTGGGATTGAAGGAAAGCTCATGACCTCCACCTCATGGCCTACTGCC
TTCTCTAGCTCGTCCTCGTTTCCCATCTTTTGCCCCTCCCTCGTCTCAGA
CAGCAGTCTCCCCCGGGGGCATGGTCCTTTCTCCTTCATCTCACCATCAT
AATCTGAGTGGTCAACAACAGCAGCAACAACAACAACAGGCTGCAGCCCT
CCAGGCGGCCGCCGCTTTCTTCCGAGGCTTCCAAGGCGCCGGTGGTTCTG
CTCGCTTTCCTCCCGTGGGTGCGAGTGGTGGTCAGTCTGGCGGCTTTCCG
TCACCCATGACGGCTGCAGCAGCCCGGGCACTGACCACCTCGCTCCACCA
TCTGCCTTCGTCTCTCTCCTCGTCTGGAACTCTATCAACGATGAGTCTTG
CGAGTGGAACAAGTCCCGCCATCATTGGTCAAGGCTTGACCAGCCGTTTG
TCGTCGTCAGCCTCGGCGGCCATGGCGGCCGCTGTTGTTGCCGCGTCCTC
CGCTTCGAGTTCTTCGCCGTCCGTATTGCCTCCACCGCCGCCCATGATTC
CTCGCCCGACTTCCCGGGGTGGTGGGCCCTTGTCCCCGAGATTTGGCATT
TTCTCCTAA
back to top
Add to Basket