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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold43_size480169 | supercontig | scaffold43_size480169:323961..329789 - |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| maker | 2018-02-12 .496401 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| snap_masked-scaffold43_size480169-processed-gene-3.15-mRNA-1:exon:473 | snap_masked-scaffold43_size480169-processed-gene-3.15-mRNA-1:exon:473 | Tigriopus kingsejongensis | exon |
| snap_masked-scaffold43_size480169-processed-gene-3.15-mRNA-1:exon:474 | snap_masked-scaffold43_size480169-processed-gene-3.15-mRNA-1:exon:474 | Tigriopus kingsejongensis | exon |
| snap_masked-scaffold43_size480169-processed-gene-3.15-mRNA-1:exon:475 | snap_masked-scaffold43_size480169-processed-gene-3.15-mRNA-1:exon:475 | Tigriopus kingsejongensis | exon |
| snap_masked-scaffold43_size480169-processed-gene-3.15-mRNA-1:exon:476 | snap_masked-scaffold43_size480169-processed-gene-3.15-mRNA-1:exon:476 | Tigriopus kingsejongensis | exon |
| snap_masked-scaffold43_size480169-processed-gene-3.15-mRNA-1:exon:477 | snap_masked-scaffold43_size480169-processed-gene-3.15-mRNA-1:exon:477 | Tigriopus kingsejongensis | exon |
| snap_masked-scaffold43_size480169-processed-gene-3.15-mRNA-1:three_prime_utr | snap_masked-scaffold43_size480169-processed-gene-3.15-mRNA-1:three_prime_utr | Tigriopus kingsejongensis | exon |
| snap_masked-scaffold43_size480169-processed-gene-3.15-mRNA-1:cds | snap_masked-scaffold43_size480169-processed-gene-3.15-mRNA-1:cds | Tigriopus kingsejongensis | exon |
| snap_masked-scaffold43_size480169-processed-gene-3.15-mRNA-1:cds | snap_masked-scaffold43_size480169-processed-gene-3.15-mRNA-1:cds-2016812 | Tigriopus kingsejongensis | exon |
| snap_masked-scaffold43_size480169-processed-gene-3.15-mRNA-1:cds | snap_masked-scaffold43_size480169-processed-gene-3.15-mRNA-1:cds-2016813 | Tigriopus kingsejongensis | exon |
| snap_masked-scaffold43_size480169-processed-gene-3.15-mRNA-1:cds | snap_masked-scaffold43_size480169-processed-gene-3.15-mRNA-1:cds-2016814 | Tigriopus kingsejongensis | exon |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of Tk12738 >Tk12738 ID=Tk12738|Name=Tk12738|organism=Tigriopus kingsejongensis|type=polypeptide|length=1164bp
MEEAKCKDILKHTLRGMLKTLALLSSLYLFICSLTFLSNSFRILGGKNLS
GFFSSSELLSNPIVGVMIGIVVTALVQSSATSTSIIVSLVSAGVSVPHAI
PMIFGSNVGTSITNTIVSITQASDRECFKRAFAAATVHDMFNWLSVIILL
AIELPTRFMEISTGYLVDQMPLGSDIQSPDLLKPLTRPFTDSVVQLDSKV
LLGWSFEDPKYNNVTTLLKTNCTDVPCPFLLAYLGEEGVDLSDSILGLLL
LAFSLLLLCMCLMVLMKVLNSMLGAKMAEVIQSTINADIPYCPWLTGYIA
MLIGAIVTILVRSSSVFTSTLTPLCGAGLVTLETVYPLTLGSNIGTTTTS
ILASLAAEGKFLKPSVQIALVHLMFNLIGILIFYPIPFMRFPIGMARKLG
EITAQYRWFAGLYLILMFFVVPVLVFALSLAGLSILYMVLGVLLLIGLGI
LGVNVLQTKQPHLLPMFLRNWDFLPLCFRSLQPVDDLISKLSWSKTPKDI
GPTEEEGVAENGEAHQLLEKPHSETQPRVVYSCRVVLSDVPSKTSRSEVE
TLVAKFGNLLSLEESSTARNLQSNPEPSPEGDNNDEETANNNGRTFTAVF
QTREEAEKAVDELNSTEIGGEKVRANLIERRPFRRTNGGPNNGFGGMLGV
GGLGMGQRQIDFPLRILVESEMVGAIIGRGGQTIRHITQQTRARVDVHRK
DNLGATEKAITIYGQPENCSKACKEIMKVMREEARNLGKTEETNLKILAH
NNLIGRIIGKQGGTIKKIMEDTNTKIAVSSINEINTFNLERIITIAGEVE
DIFAAESEISSKLRAAYEHDIQAMTPQSMMFPGLHPAAMMSTAATMPTAP
IQPAAPAYGLGHGHHPHHIQGSGPGHHHAPGGVGGFQGSGVPGMNRNQQF
QSGPTRGPGLGGVASMPRSNGFELMGGSPAHFQTPNASQSETTYLSVPNS
SVGAIIGSKGSHIRNIIKFSGALVKIAQQPDCPGAPDQSVVEDGVGDVSA
SPTTHVNSGNINNNVDERRITVVGNPESQWKAQFLIFDKIREENFNRGSL
DEIRLRVEILVPSNQVGRIIGKGGTNVRELQRITGAEIKLPEQGSSSGEE
TPVHLTGVFFSVQSAQRRLRAMITSVNQHEHQSHHPRPVVHQQQLSVSPL
NGRVEGAVEGFSEC back to topmRNA from alignment at scaffold43_size480169:323961..329789- Legend: polypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >snap_masked-scaffold43_size480169-processed-gene-3.15-mRNA-1 ID=snap_masked-scaffold43_size480169-processed-gene-3.15-mRNA-1|Name=snap_masked-scaffold43_size480169-processed-gene-3.15-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=5829bp|location=Sequence derived from alignment at scaffold43_size480169:323961..329789- (Tigriopus kingsejongensis)
ATGGAAGAGGCCAAATGCAAAGACATTCTCAAGCACACCCTGAGGGGGAT
GCTCAAAACCCTGGCCCTCCTGTCCTCCCTATACCTCTTCATATGCTCTC
TGACGTTCCTCAGCAACTCATTCAGGATATTAGGAGGGAAGAACTTGTCC
GGGTTCTTCTCATCCTCCGAGCTCCTGTCCAACCCGATCGTGGGTGTCAT
GATCGGTATCGTGGTAACCGCTCTCGTCCAGTCTTCGGCCACCTCGACTT
CCATCATCGTCTCCTTGGTGTCTGCGGGTGTGTCTGTGCCCCACGCTATC
CCAATGATCTTTGGTTCCAATGTGGGAACTTCAATTACCAACACCATTGT
GAGCATTACTCAGGCGAGCGACCGGGAGTGTTTCAAACGCGCCTTCGCCG
CAGCCACCGTCCATGACATGTTCAACTGGCTCTCCGTTATCATCTTGCTC
GCCATAGAGTTGCCCACCAGGTTCATGGAGATCTCAACCGGATACTTAGT
AGATCAAATGCCCTTGGGCTCAGACATTCAAAGTCCGGATTTACTGAAGC
CCCTCACCCGACCTTTCACCGATAGTGTCGTTCAGTTGGACTCCAAAGTT
CTTCTCGGCTGGTCTTTCGAAGATCCAAAGTACAACAACGTGACCACGCT
CCTGAAGACTAATTGCACCGATGTCCCTTGCCCATTTCTTTTGGCTTACC
TAGGAGAAGAGGGGGTTGATTTGAGCGATTCCATCCTCGGACTGCTCCTA
CTAGCGTTTTCGCTCCTCCTGCTCTGCATGTGTCTGATGGTCCTCATGAA
GGTTCTCAATTCCATGCTGGGAGCCAAGATGGCTGAGGTCATTCAGTCCA
CTATCAATGCCGACATTCCCTACTGCCCATGGCTGACCGGGTATATTGCC
ATGCTGATAGGAGCTATTGTGACCATCTTGGTGCGTTCCTCCTCGGTGTT
CACGTCAACGCTCACCCCCCTCTGCGGAGCCGGTCTGGTCACCCTCGAAA
CAGTCTATCCACTGACTCTGGGCTCGAATATTGGCACAACGACCACGAGC
ATCCTGGCTAGCTTAGCGGCTGAGGGAAAATTCTTGAAGCCGTCCGTGCA
AATTGCCTTGGTGCACCTGATGTTCAACTTGATCGGAATCCTCATCTTCT
ATCCCATCCCCTTTATGAGATTTCCCATTGGGATGGCGAGGAAATTGGGA
GAAATCACTGCCCAATATCGGTGGTTTGCGGGCCTCTACCTCATCCTCAT
GTTCTTCGTCGTACCAGTCTTGGTCTTTGCTCTCTCATTGGCGGGTCTCT
CGATCCTCTACATGGTCTTGGGTGTCTTGCTCCTCATTGGGCTTGGCATT
CTGGGAGTAAATGTGCTACAGACGAAACAACCCCATCTGCTACCGATGTT
TCTCAGAAATTGGGATTTCCTCCCCCTCTGCTTCCGAAGCCTGCAACCTG
TGGATGATCTCATTTCCAAACTAAGTTGGTCCAAGACACCAAAAGACATC
GGTCCCACAGAGGAAGAAGGAGTTGCGGAAAATGGCGAAGCTCATCAGTT
ACTGGAGAAACCCCATAGCGAAACGCAGCCTAGAGTAGTGTAGTAAGAGT
GGAAATTGAACGAAAAAATTTATGAGTTATCTGACATAAAGTCGACCGGC
ACAACTGTATGCGGTCTGTATTTACTGCTTGTACGCGCCAGAGGGGACTC
CCAAGGCGAGAATTGCATCAATTCCTCACCTTTAATGCCGCCACCTTTGT
CGAATGACGAGTGAAGCGGCCAGTGTGTTCCTTCATGTGATTAATATCTA
AAACCTGAATAAAAAGATCCATGGAACTGTGTTTTTAAGGGATTGACCAT
GGAACTATTCGAGAAACACACAAACGTTTGTTTTTGATTCGAATCGAAGA
ATTCCCAGGCCTGATGGGGGGGGGGGGACCTTAGTCCTTTTGCATTTGTC
TAAAGGATCCATGCCTAACGCTTTAGTCGTATGAAGATGCATCAAGCGCT
GTTTGAGCTTCGGACAACGGGCTTAATCAAAATGTTGTCTCTTGCAGCTC
CTGCCGAGTAGTTCTGTCAGATGTCCCGAGCAAAACATCTCGCTCAGAGG
TCGAGACGTTGGTGGCCAAATTTGGAAATCTGCTTTCCCTGGAAGAATCC
TCGACGGCTCGAAATCTTCAGTCAAATCCTGAACCATCACCAGAGGGTGA
CAACAACGACGAAGAGACAGCAAACAACAATGGTCGCACCTTTACGGCTG
TGTTCCAGACTCGCGAGGAAGCGGAAAAAGCCGTGGACGAGTTGAACTCG
ACTGAGATTGGAGGCGAGAAAGTGCGGGCCAATTTGATCGAAAGGCGTCC
CTTCCGGAGGACGAATGGCGGTCCCAATAATGGCTTTGGAGGCATGCTCG
GAGTGGGTGGACTAGGAATGGGACAGAGACAGATCGATTTCCCTTTGCGA
ATATTGGTTGAGTCGGAAATGGTGGGTGCCATCATTGGCCGCGGAGGTCA
AACCATTCGGCACATCACTCAGCAAACCAGGTAGATTAGGGGTGACATTT
TCCTCAGCCCAAGTTCGGAGGGACAGGGTGCTGTGAGCTAACCACGATTG
AAAAAATATCCTTCCAGAGCCCGGGTAGATGTGCACCGGAAAGACAATCT
GGGCGCTACGGAGAAGGCCATCACAATTTATGGACAGCCGGAAAATTGTA
GCAAAGCCTGCAAGGAGATCATGAAAGTCATGCGAGAGGAAGCCAGGAAT
TTGGGAAAGACTGAGGAGACTAATCTCAAGATTTTGGCTCACAACAATCT
CATCGGACGAATCATCGGCAAACAGGTAAGATGTGGCGGATAATGTATTA
TGATGAGCCCGTCTATGACACCCTCAATTACGCACTCTTCCAGGGAGGCA
CCATAAAGAAAATCATGGAAGACACCAACACGAAGATCGCCGTATCTTCG
ATCAATGAAATCAACACCTTTAACCTGGAGCGAATCATCACGATTGCGGG
TGAAGTCGAGGACATCTTTGCAGCCGAATCCGAAATCAGCTCCAAACTGA
GGGCCGCGTACGAGCATGACATCCAAGCGATGACTCCTCAATCCATGATG
TTCCCAGGGCTCCATCCGGCTGCAATGATGTCCACGGCGGCCACCATGCC
AACAGCCCCAATCCAGCCGGCTGCACCGGCCTATGGCCTAGGACACGGCC
ATCACCCCCATCACATTCAAGGTAGTGGACCCGGACATCACCACGCTCCA
GGAGGTGTGGGTGGATTTCAAGGTTCCGGAGTTCCAGGGATGAATCGTAA
CCAGCAATTTCAAAGCGGTCCGACCCGAGGACCTGGCCTCGGGGGTGTGG
CGTCCATGCCCAGATCCAACGGATTCGAACTGATGGGCGGTTCTCCTGCG
CATTTCCAGACTCCCAATGCGTCGCAAAGCGAAACTACCTACCTCTCTGT
CCCAAACTCCTCGGTGGGCGCCATCATCGGCTCCAAGGGAAGTCACATAA
GGAACATTATTAAGTTTTCCGGGGCTTTGGTCAAAATTGCCCAACAACCG
GATTGCCCAGGAGCACCAGACCAGTCCGTCGTCGAGGATGGAGTCGGAGA
CGTCTCTGCCTCCCCCACGACTCATGTGAACAGCGGGAACATCAACAACA
ATGTGGACGAGCGGCGCATCACTGTCGTGGGCAATCCGGAGTCTCAGTGG
AAAGCTCAATTCCTCATCTTCGACAAGATCCGAGAGGAGAACTTCAACCG
CGGATCTTTAGACGAGATCCGGCTCCGAGTTGAGATCCTCGTTCCGTCGA
ACCAAGTTGGGCGCATCATCGGCAAAGGCGGCACCAATGTCAGAGAGCTT
CAAAGGATCACGGGGGCCGAAATCAAGTTGCCAGAACAAGGATCATCATC
GGGAGAGGAGACGCCAGTACATCTGACGGGAGTGTTCTTCTCTGTACAAG
TAAGACTTTTATGATCCATTTTATCGTCAAGGAGGGTGGGTCCTCTTTAA
ACTATTTAATCAAGGATCTGAATCCAGTTTCGACTGCCTGGTTTGCGGTT
TCCTCGGTAATTTATTCATAACCGACATATCCAACCATTCGCCCCAAAAT
CGCATAGGAAACTAGGAATTGTGATCCTTTCGGAATCTTGTCAAACCAAG
GTCACTCGTCGCTGACTTTTGTTTTGTGTACGATTCCACTTTTCCGTTAA
CCTGCCTTGTCTGAAAGTTATTATGGCGCTTTCAATTACCGATTTGTGGT
TTCATTGGCATTTAAACAACCCCTTATGCTCCGATATCAAACCTTGCTGT
GATTGCCTTTAATCTCAAGCTTTTCAATCTGATTTCTCTTCTAGTCTGCT
CAACGTCGCCTTCGAGCCATGATCACGTCAGTCAACCAACATGAGCACCA
ATCTCACCACCCTCGTCCAGTGGTCCATCAGCAACAGCTAAGCGTTTCTC
CTCTCAATGGACGTGTCGAAGGTGCCGTGGAAGGCTTCAGTGAATGCTAG
ATCACAAAGTTATGAGTGAGGATCACAAGTGGCCCATTTTGCGTGGCCGA
CAGAGGGACAGTTACTCTCCCTCCTTCCTCAGCAAGGATTAAGCTCATCT
ACCTGGGCAAATTGCATCACCACCACCATTCAACAACAATTGCACCGAAG
GCTCCTTCCAATTTAGCATGGCCACTATTTATGCTCGTTGTTCATCTAAG
CCTTGCCTCTTTTATGGAGCCATCGAGCCCGAAAACACGTTTCTGTCGCA
ATCCAACACTTCTGCATTTGATTGTTGCCCTTCCGTATTCAACAAAGGAT
AATGTTTCAATTCCAATTTGGCCTCTTGTCCAACTTCAAACCCCCAACTA
ATGCGAACTAGCCAACTCCTGAGTTGATGTCACCTGAGCCGAAATTGTCA
AGACTGAGCAACAGCCATCTCTCTCGCCCACGAACAATCGTGCGAGAGGG
ACGGACGCAGTATGAAAAGCCGTAGTAGTGCACTAGAAGTTCGTACAAAT
GGCTATTTTCCTATATTTACTATTTTTATACGATGCCATATTACAGCTGC
TGCCTATGATAAGATGCTATTTAATGGAGATGTTGTGCTCCGCTAGTTAA
TAATGTGTTATACAATTTATTGCATCCCATGAAGGAGAATTACGTCAAAG
TACCTTAGCTGCTGACTTTATTCCCGTATATCGCAACCAAAAGACTGAAG
AACAACTCAACTTCCCCCTCAATAGCCCCCAACCTCAACCGGAATGATTG
CAAAACTACCAAGCGACTCATTGAGACTGAGCAGCAACTGCTGTACCAAT
AGCCAACAAGCCCCTCTACCTAACTAAGCATTGTTCGTTCCATTGTCGTA
CTGACCCCTCTCGAATGGAACGCCCATTTCATCCATTTGGCGCCCAGCAA
CGAACTGGTATCGTTATTATTAAGGCTCGGAACCACTCTTGACCAAATAA
TAGTTGCGCACCCTCAATAGATACACCGTAGACAAATGAAGACACACTAT
TTAGCTGCTTGCACCAAACCATCGATCAAGCGATTGAACCAGAATCGTAT
GTAAAATAGCCCATTTCTAACATTTAAGGGGTTTCCAGAAATTTCCAAAA
CCATGGCCGCCACATTTCAAGCAAGCCGCTCGCGATGACTTTTACACCGC
AACATCATCCATATTGGTCCCGTTTCGGTCGCAAGAAAAATCATCGGATT
GCTCGCCGCCAGAATTCTGTTATTGTACATGAAGCCAAATGCCTGCCAAT
TGCCGGACCCAAACATCCTTCATTTCCACAATTTCTTTTGCTCTGACGGG
AATAAAAAGTGGTACTTCATTAGCAGAGA back to top
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