snap_masked-scaffold455_size166772-processed-gene-0.18-mRNA-1, snap_masked-scaffold455_size166772-processed-gene-0.18-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namesnap_masked-scaffold455_size166772-processed-gene-0.18-mRNA-1
Unique Namesnap_masked-scaffold455_size166772-processed-gene-0.18-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold455_size166772supercontigscaffold455_size166772:42736..49044 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
calcium-transporting atpase sarcoplasmic endoplasmic reticulum type-likesnap_masked-scaffold455_size166772-processed-gene-0.18Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
snap_masked-scaffold455_size166772-processed-gene-0.18-mRNA-1:exon:339snap_masked-scaffold455_size166772-processed-gene-0.18-mRNA-1:exon:339Tigriopus kingsejongensisexon
snap_masked-scaffold455_size166772-processed-gene-0.18-mRNA-1:exon:340snap_masked-scaffold455_size166772-processed-gene-0.18-mRNA-1:exon:340Tigriopus kingsejongensisexon
snap_masked-scaffold455_size166772-processed-gene-0.18-mRNA-1:exon:341snap_masked-scaffold455_size166772-processed-gene-0.18-mRNA-1:exon:341Tigriopus kingsejongensisexon
snap_masked-scaffold455_size166772-processed-gene-0.18-mRNA-1:exon:342snap_masked-scaffold455_size166772-processed-gene-0.18-mRNA-1:exon:342Tigriopus kingsejongensisexon
snap_masked-scaffold455_size166772-processed-gene-0.18-mRNA-1:exon:343snap_masked-scaffold455_size166772-processed-gene-0.18-mRNA-1:exon:343Tigriopus kingsejongensisexon
snap_masked-scaffold455_size166772-processed-gene-0.18-mRNA-1:exon:344snap_masked-scaffold455_size166772-processed-gene-0.18-mRNA-1:exon:344Tigriopus kingsejongensisexon
snap_masked-scaffold455_size166772-processed-gene-0.18-mRNA-1:exon:345snap_masked-scaffold455_size166772-processed-gene-0.18-mRNA-1:exon:345Tigriopus kingsejongensisexon
snap_masked-scaffold455_size166772-processed-gene-0.18-mRNA-1:exon:346snap_masked-scaffold455_size166772-processed-gene-0.18-mRNA-1:exon:346Tigriopus kingsejongensisexon
snap_masked-scaffold455_size166772-processed-gene-0.18-mRNA-1:three_prime_utrsnap_masked-scaffold455_size166772-processed-gene-0.18-mRNA-1:three_prime_utrTigriopus kingsejongensisexon
snap_masked-scaffold455_size166772-processed-gene-0.18-mRNA-1:cdssnap_masked-scaffold455_size166772-processed-gene-0.18-mRNA-1:cdsTigriopus kingsejongensisexon
snap_masked-scaffold455_size166772-processed-gene-0.18-mRNA-1:cdssnap_masked-scaffold455_size166772-processed-gene-0.18-mRNA-1:cds-1975935Tigriopus kingsejongensisexon
snap_masked-scaffold455_size166772-processed-gene-0.18-mRNA-1:cdssnap_masked-scaffold455_size166772-processed-gene-0.18-mRNA-1:cds-1975936Tigriopus kingsejongensisexon
snap_masked-scaffold455_size166772-processed-gene-0.18-mRNA-1:cdssnap_masked-scaffold455_size166772-processed-gene-0.18-mRNA-1:cds-1975937Tigriopus kingsejongensisexon
snap_masked-scaffold455_size166772-processed-gene-0.18-mRNA-1:cdssnap_masked-scaffold455_size166772-processed-gene-0.18-mRNA-1:cds-1975938Tigriopus kingsejongensisexon
snap_masked-scaffold455_size166772-processed-gene-0.18-mRNA-1:cdssnap_masked-scaffold455_size166772-processed-gene-0.18-mRNA-1:cds-1975939Tigriopus kingsejongensisexon
snap_masked-scaffold455_size166772-processed-gene-0.18-mRNA-1:cdssnap_masked-scaffold455_size166772-processed-gene-0.18-mRNA-1:cds-1975940Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1975941auto1975941Tigriopus kingsejongensispolypeptide
Tk12523Tk12523Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk12523

>Tk12523 ID=Tk12523|Name=Tk12523|organism=Tigriopus kingsejongensis|type=polypeptide|length=1049bp
LSTPIEDFHVGPSTSPVPAPPLVELEIPASERREGTSLARGHPAPSTFTM
EDAYMRPWEDACDHFDVKLEHGLTTEQVTTNLDKYGHNELPAEDGKSIWR
LILEQFDDLLVKILLLAAIISFVLAFFEDDEDSITAFVEPFVILLILIAN
AIVGVWQERNAESAIEALKEYEPEMGKVIRADKDGVQMIRARDIVPGDIV
EISVGDKAPADIRIIHIMSTTLRIDQSILTGESVSVIKHNEPVPDPKAVN
QDKKNMIFSGTNVAAGKGRGIVIGTGLNTSIGRIRTEMTETEEIRTPLQQ
KLDEFGEQLSKVITLICIAVWAINIGHFNDPAHGGSWMKGAVYYFKIAVA
LAVAAIPEGLPAVITTCLALGTNRMAKKNAIVRSLPSVETLGCTSVICSD
KTGTLTTNMMSVCKMFTFKNDRDFEEFEISGSTYEPIGDVFQSGRKVKGK
DFIALEELATISIMCNDSAIDFNEYKNAFEKVGEATETALIVLAEKINPF
GVSKDGGRLNSAKVVRKDMESKWNKEFTLEFSRDRKSMSTYCTPKKPSRI
GSGPKMFIKGAPESVLDRCSHFRVGNDKREMTREMRQKIMDRAVAYGTGR
DTLRCLALATADSPISPRDMDMNEAVKFVKYEVNLTFVGVVGMLDPPRME
VAPSIVRCKEAGIRVIMITGDNKNTAEAICKRIGIFEEDENTEGLAYSGR
EFDALSPAEQRKACGVAKMFARVEPFHKSKIIEYLQSMKEVTAMTGDGVN
DAPALKKAEIGIAMGSGTAVAKSASEMVLADDNFASIVAAVEEGRAIYNN
MKQFIRYLISSNIGEVVSIFLTAALGLPEALIPVQLLWVNLVTDGLPATA
LGFNPPDLDIMNKPPRSSEETLITPWLFFRYMCIGLYVGLATVGGAAYWF
LMDPTGPQMSYWQLSHFLQCSTEPEKFKGISCDIFQAPEPMTMALSILVT
IEMANALNSLSENQSLLVMPPWINPILLAAMALSFSLHFLILYVDVLATV
FQITPLSIDQWVTVMKFSLPVILLDELLKFVARNYADVPGIPKEIKKRV
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mRNA from alignment at scaffold455_size166772:42736..49044-

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold455_size166772-processed-gene-0.18-mRNA-1 ID=snap_masked-scaffold455_size166772-processed-gene-0.18-mRNA-1|Name=snap_masked-scaffold455_size166772-processed-gene-0.18-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=6309bp|location=Sequence derived from alignment at scaffold455_size166772:42736..49044- (Tigriopus kingsejongensis)
AACAAGTCGACCAGCCCAGAATAGTTGTTTCAGCCAGTGATTGGACGGTA
CTGAGCACGCCGATCGAGGACTTCCACGTAGGCCCCAGTACTTCCCCCGT
CCCCGCTCCACCCCTGGTCGAGCTCGAGGTAACGCCCCCAGTTCCGCCCC
AGTTCCGCCCCTGTTCCGGTGGTCTGTTTATCTGCTTATCTCGTCCATCG
CGGTCGACGTCATGCCCACCCTCCTCGGCTTGGCGTGGTGTCGTAAGCCC
TCGTGGCCTCCTCGCATCCTGGGCCGAGACTGTTTCAGGGCTCATTCCAC
TCAAGCTTGGCTGTGTGCTTTTAGATCCCCGCCTCTGAACGCCGAGAGGG
AACGAGTTTGGCCCGTGGACACCCCGCCCCCTCCACTTTCACCATGGAGG
ACGCCTACATGCGCCCCTGGGAGGACGCCTGCGACCACTTTGACGTCAAA
CTGGAGCACGGTCTAACCACGGAGCAAGTGACCACCAACTTGGACAAATA
TGGACATAACGGTAAGTCCCGCCCACTGCCCACTCGCTCTCTGACCCGCC
AGCCATGATAGCGCATTGGACCCGTTGCAGAACTACCCGCCGAAGATGGC
AAGTCCATTTGGCGCCTGATCCTGGAACAGTTCGACGATCTCCTCGTGAA
AATCCTCCTCCTCGCCGCCATCATCTCCTTCGTAAGTGACGGCTTGGCCG
TTGGGACCCACTTCCCAGTCGCTAACGCTGCTCCTCCCTGGCTCTTTAGG
TCTTGGCCTTTTTCGAGGATGACGAAGACTCCATCACCGCCTTTGTGGAA
CCTTTCGTCATCTTGCTCATCCTCATCGCCAACGCCATCGTGGGAGTCTG
GCAGGTGAGTGTCGTCCCCCTGTACCCGAATAGGTCAATGGACCCCCTCT
CACGCTCAGGTTAATGGGCCTTTTATGTTTCAATGACTAATTGAATGGCC
CAGTTTAAAGGGCTATAGGCCCCAATCACACATACACTCATTCACCGCAG
CTGGCCCCAGTCCAATTGGCCGACTTCGGTTGGGACAACTCGCTCAAACA
TGATCACGAATAGCTAGTCTGGCGTCTGGATTCAGTGATGGACACTTTTT
TTTCCCAGCCGGGGCCTGTCAAAATCTCCCTGAATAAATTTCCGTAGATA
AACGGATCCAAATATTGGCCAAAGCCCATCAATGGCCTCGAAACAATGGA
AAAGATGAACGAGAGTGCCTGTAATAGCTTTCTTCGATCCGTAGGAGCGA
AATGCCGAGTCCGCCATTGAAGCCCTCAAAGAGTACGAGCCGGAGATGGG
CAAGGTCATTCGCGCCGACAAAGACGGTGTGCAAATGATCCGAGCCCGTG
ACATCGTGCCTGGTGACATTGTCGAGATCTCAGGTGGGTACCTCCAGATC
ATACCCATGAATCGATTTCAAAGTAACACGTTTTTGTCTCATTGCCAGTG
GGTGATAAAGCCCCCGCTGATATCCGGATCATTCACATCATGTCCACCAC
CCTCCGGATTGATCAATCCATTCTGACCGGCGAGTCCGTGTCGGTCATCA
AGCACAACGAGCCCGTGCCCGATCCCAAGGCCGTCAACCAGGACAAGAAG
AATATGATCTTTTCTGGCACAAACGTGGCCGCCGGAAAGGGCCGCGGTAT
TGTGATTGGCACTGGCTTGAACACGTCCATTGGCCGCATCCGGACTGAGA
TGACTGAAACTGAAGAGATCCGTACGCCCCTTCAACAGAAGTTGGATGAA
TTTGGAGAGCAACTGTCCAAGGTGATCACCCTCATCTGCATCGCTGTCTG
GGCTATCAACATTGGCCATTTCAACGACCCTGCCCATGGTGGATCTTGGA
TGAAGGGTGCCGTCTACTACTTCAAGATCGCCGTGGCTTTGGCTGTGGCC
GCTATTCCCGAGGGACTGCCAGCTGTTATCACCACCTGCTTGGCTCTGGG
AACCAACCGAATGGCCAAGAAGAATGCAATCGTCCGATCATTGCCTTCCG
TGGAGACCCTTGGTTGCACCTCGGTTATCTGCTCAGACAAGACTGGCACA
CTCACCACCAACATGATGTCCGTGTGCAAGATGTTCACCTTCAAGAACGA
CCGAGATTTCGAGGAGTTTGAAATCTCCGGATCGACCTACGAGCCCATCG
GTGACGTATTCCAGAGCGGCCGCAAGGTCAAGGGAAAGGACTTCATCGCC
TTGGAAGAGCTGGCCACCATCTCCATCATGTGCAACGATTCCGCCATTGA
TTTCAACGAATACAAGAACGCCTTTGAGAAGGTGGGAGAAGCCACGGAAA
CTGCCTTGATTGTGTTGGCCGAGAAGATCAATCCATTTGGTGTGTCCAAG
GATGGGGGCCGACTGAATTCTGCCAAGGTTGTGCGCAAGGATATGGAGAG
CAAATGGAATAAGGAGTTCACTCTGGAATTCTCCCGAGACCGAAAGTCCA
TGTCCACTTATTGCACCCCCAAGAAGCCGAGCCGTATTGGATCGGGTCCC
AAGATGTTCATCAAGGGCGCGCCCGAGAGCGTCCTGGACCGTTGTTCCCA
CTTCAGAGTTGGCAATGACAAGCGAGAAATGACCCGTGAAATGCGTCAAA
AGATCATGGACCGAGCCGTGGCTTACGGAACTGGCCGAGACACCCTGCGT
TGCCTGGCTTTGGCCACTGCCGACAGTCCCATCAGCCCCCGAGATATGGA
CATGAATGAAGCCGTCAAGTTCGTCAAATACGAGGTGAACCTCACCTTCG
TGGGTGTGGTGGGCATGCTGGATCCCCCTCGCATGGAAGTGGCTCCCTCC
ATTGTTCGTTGCAAGGAGGCTGGCATTCGAGTCATCATGATCACTGGAGA
TAACAAGAACACTGCCGAGGCTATCTGCAAGCGAATTGGCATCTTTGAAG
AGGACGAGAACACGGAAGGCCTGGCGTACTCTGGTCGCGAATTCGACGCC
CTCTCTCCGGCCGAACAACGCAAGGCTTGCGGTGTGGCCAAGATGTTTGC
CCGCGTGGAACCCTTCCACAAGTCCAAGATTATCGAGTATTTGCAATCCA
TGAAGGAAGTCACGGCTATGACGGGTGATGGTGTGAATGATGCTCCCGCG
TTGAAGAAAGCCGAAATTGGTATTGCCATGGGCTCCGGAACCGCTGTGGC
CAAATCTGCCTCCGAGATGGTGTTGGCCGACGACAACTTTGCCTCCATTG
TGGCTGCTGTTGAAGAGGGCCGTGCCATCTACAACAACATGAAGCAGTTC
ATCCGTTACTTGATCTCCTCCAACATTGGCGAAGTGGTGTCCATTTTCCT
CACGGCCGCCCTTGGTCTACCCGAAGCGCTCATTCCAGTTCAATTGCTGT
GGGTGAACCTGGTTACTGATGGCTTGCCCGCCACCGCTCTGGGCTTCAAT
CCCCCCGATTTGGACATTATGAACAAACCTCCCCGATCCTCTGAAGAGAC
TCTCATCACCCCCTGGTTGTTCTTCCGCTACATGTGCATCGGTCTCTATG
TTGGTTTGGCCACGGTCGGAGGTGCCGCCTACTGGTTCCTCATGGATCCC
ACTGGACCTCAAATGTCCTACTGGCAGTTGTCCCACTTCCTCCAATGTTC
GACTGAGCCCGAGAAGTTCAAGGGTATTTCGTGCGACATTTTCCAAGCTC
CCGAGCCCATGACCATGGCCCTGTCCATCTTGGTCACCATCGAAATGGCC
AATGCCCTCAATTCCCTGTCAGAAAATCAATCTCTTCTGGTCATGCCCCC
GTGGATCAATCCCATCCTGTTGGCTGCGATGGCTCTATCGTTCTCTCTCC
ATTTCCTCATCCTCTACGTTGATGTCCTCGCAGTAAGTGTGAAAAGGGAC
ACCAATCTCTGCTCAGCAACACCCTCTCAATCATCATCATTGTCCTCTCT
TTCAGACTGTTTTCCAAATCACTCCTCTGTCCATCGATCAGTGGGTCACG
GTAATGAAGTTCTCATTGCCCGTGATACTCCTGGATGAGTTGCTGAAGTT
CGTTGCTCGAAACTATGCGGACGGTAAGCCCGGAATCAGATGGGTAGAGT
TGTGTTCGATTCTTGCCGTGTTTGTGGCGTACGGGTACGGATGGTATCTT
CACGAATTGACCATTTTGGCACAACTACACAAATAGAGCGCAAAAATAAC
GAAGGCATTGATGGCCTGTGCCGCTGTGAGCATAGCTTCAATACATTGTG
GAGGTTGATCGCCGGCTTCTTCTCCCCCCCACCTCATCTGGACAGGACAC
AATATGCCTTCTATCCACCTCATGTTCCCCCTGATCTAGGGGGAGAAACT
GCGGCTGGGGCGAAACCTGTTCATTAGGAATAAATTGGCAGATGCGACGA
GCATTTAGGATTTTCTACTACAACTTAAGTACCGTACACACGAAGACGAA
TATTGGTGCCGTCATCCCATTCACCGTTGAATTTTTCATGATTTCAATTA
ATTGCACGCAATGTCTTCTTCACAAACCGCATTGTTACTCCGCAGTATAC
ATATACCCCACCACCCAACTTTTTATTCTCCATTCCCTCGTCAATTTCTC
CTCGTTCTGCTCACCATGTGTGGCCTTTGTACGAGGTAGCCATATTCAAA
TACAAACATCTTCAGTAGTCAAAAAAAAAAAAAATTGAACAGCGAAACGT
TTTGTGATCCATAGCGGCTCTCCTCCGGTTTTTGTGCAAATGTATTGTAT
TCGTAACGTCTGGAGGGAACATTTCAGTTACTTCTAGTTTCATTTTTCCC
ATGAGAAAATATGCCTACTAAGATTTTTCAACACTGTTTTGATATGTGCC
AAGAGGTGTAAGAGGTGCAAAATCCTTTCTGGACTGAGTAATTCCGTCTG
TTGTTTTCCTTGCTTGTCCACCACCCCAAAAACATTGAGATAAACGCAAA
TTTTCAAGAACATGATAATTATGAACTGTGCTTACTACTACTATTCTACT
ACAACATCATAAAGTAACCAAATAAAATATCGTGGTTTTGACATCCGTGT
TCTGTTTTTATCCTCATTCCTCGCCCAACCAAAAGTTGTCGATCTAACAT
GTCCTTCTCATACTAACCATATTGTGAAACGCCTGATCGGAAATCGGCCC
AATCACCTCGATCCGGATTGCTGTGGAATTAACCGATGCCTACCTAATCC
AGGTTGGCCAAATAACCCTTCTACTAGGTGAGTGTTGCTCTCCTCTCGGC
CATTATGAGTTCGATGCTGGGCATTCAAATTCCCCCCTCGTTGCCAATCA
TGCTTTGTGGGAGGCCTTTTGGGGTTCATCGGGTGACGGCGTGGTTTTCT
ATTTTTTTAATCTTTTTTTTCAGTGGAGCTTTGGGGTTTGAGTGAGAAGC
AAAGACTGAAATTGAGACACCGACTAGACTGACTAAGCGTGATTTAAACC
TGCCTTTCCACCACTTTGAATTGACTCCTCTCGGTTCGTTTTATACTCAA
TGATTGGCGTGAGTACATTTTGAGTCTAAACAAGGGATTGTTATCCTCAA
CATGGCAACTCACGCGGATGTGGTCTCTCTTTTCCAGTTCCGGGTATTCC
CAAAGAGATCAAGAAGAGAGTCTAAATCAGTCGGTTCAGATTCAATGGAA
AAGGACAGAAGAGACACTTTATAGACATTCAAAACAATCAACCACCAAGA
AGATGCATACAGATCCAAGTCTTCCACAACTCTTCTTGCGACCGAGTCGA
CACGACGATTCCCTCAAGTTCAAACCGCGTTGCTCCTACTATTCTTTGAT
CCATTGCCTTCAATGGAAGCCTTCCCATTTCCGTCCTTTTAGCGTTAAGA
TCCTCGTCAATGTTCAACATCCACAGTGAAACAATGGAACTGATATTGTA
CAGAAAGATATTCTGGTCGCCCCCTCGATTCTCCACCCGCCACCAATTGC
CAATTCAATAAATTATCCCTACTCATCACACCCAGACAAACATTCGCTGT
CCATCTTATGTTGTTCCTAGCAATTACCACCAATATTAATCTAGGAGATG
GCCTAAACGTCTCGCTTTTGTATTAATTTCTTCCTTCAATTTCACAAACT
GTTCACCCACCCACATTTTCCTCTGTTTAGTATTTCTCCCCCCCCAAGAT
GTTCAATCGGCCGCATTTGGGCGGACTCTTGATAGTGAACTTTTTTTCTG
GTGCGTGTGATTCCAAGGTTGTTGGGCTCAAGGAGAGGATGATGATTCAG
AGAGAATGAAGATGACACTTTGTTGTATGATGTTGCCACCATTTCCTGTG
AATGGATGATTGTTGTTTTTGTCTTTAGGAAGCAATAAAAAAAACCAACA
TGAGCCAGA
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