snap_masked-scaffold473_size162088-processed-gene-0.11-mRNA-1, snap_masked-scaffold473_size162088-processed-gene-0.11-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview


Name	snap_masked-scaffold473_size162088-processed-gene-0.11-mRNA-1
Unique Name	snap_masked-scaffold473_size162088-processed-gene-0.11-mRNA-1
Type	mRNA
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold473_size162088	supercontig	scaffold473_size162088:127976..135611 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
AF312033_9ZAN	snap_masked-scaffold473_size162088-processed-gene-0.11	Tigriopus kingsejongensis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
snap_masked-scaffold473_size162088-processed-gene-0.11-mRNA-1:exon:277	snap_masked-scaffold473_size162088-processed-gene-0.11-mRNA-1:exon:277	Tigriopus kingsejongensis	exon
snap_masked-scaffold473_size162088-processed-gene-0.11-mRNA-1:exon:278	snap_masked-scaffold473_size162088-processed-gene-0.11-mRNA-1:exon:278	Tigriopus kingsejongensis	exon
snap_masked-scaffold473_size162088-processed-gene-0.11-mRNA-1:exon:279	snap_masked-scaffold473_size162088-processed-gene-0.11-mRNA-1:exon:279	Tigriopus kingsejongensis	exon
snap_masked-scaffold473_size162088-processed-gene-0.11-mRNA-1:exon:280	snap_masked-scaffold473_size162088-processed-gene-0.11-mRNA-1:exon:280	Tigriopus kingsejongensis	exon
snap_masked-scaffold473_size162088-processed-gene-0.11-mRNA-1:cds	snap_masked-scaffold473_size162088-processed-gene-0.11-mRNA-1:cds	Tigriopus kingsejongensis	exon
snap_masked-scaffold473_size162088-processed-gene-0.11-mRNA-1:cds	snap_masked-scaffold473_size162088-processed-gene-0.11-mRNA-1:cds-1999065	Tigriopus kingsejongensis	exon
snap_masked-scaffold473_size162088-processed-gene-0.11-mRNA-1:cds	snap_masked-scaffold473_size162088-processed-gene-0.11-mRNA-1:cds-1999066	Tigriopus kingsejongensis	exon
snap_masked-scaffold473_size162088-processed-gene-0.11-mRNA-1:cds	snap_masked-scaffold473_size162088-processed-gene-0.11-mRNA-1:cds-1999067	Tigriopus kingsejongensis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto1999068	auto1999068	Tigriopus kingsejongensis	polypeptide
Tk03942	Tk03942	Tigriopus kingsejongensis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at scaffold473_size162088:127976..135611+

protein sequence of Tk03942

>Tk03942 ID=Tk03942|Name=Tk03942|organism=Tigriopus kingsejongensis|type=polypeptide|length=1221bp
MQEDHRPRIRPVLMATLAIVGQAQYLYAPYGLASVPASQEDDFNRNTHSR
QYWSPFGNSYQPQVVRPNQYFSRPSSSSSSSSYPSNYGSSGRFSSPSSSS
SQTGFNTFPSSSGSSSGGNNGYSTYYREAPPKPRAPTSVNQQFQSRPQII
EQPHRVFTTKAAAAPTTPTTTTETPTTTTTTPTTTSTTPTTITTTTTTTT
TTRSTTTTTRSTTTSAATITPTPLITTSETPKPVGDFRTDPTYQDEYKMF
MEWLKNKKNHANIQLQRSPDEGDEKIQDTAASEAPQVTTSPILDTTIRTT
SERPVVELAKTLTTQVPELPEYDALEDGEQNPDTRTDEALESTSTTTDPI
ATTTEVAELEETTTDVIPTIPETTTTVDEMADTTTVKDALADTTTSVPLN
NQEEAREIVKIKGFLYRKVPIKVTELMKSRTKPLEEQMGIDSTDIAEEPT
TAQFQSRPQIIEQPHRVFTTKAAAAPTTPTTTTETPTTTTTTPTTTSTTP
TTITTTTTTTTTTRSTTTTTRSTTTSAATITPTPLITTSETPKPVGDFRT
DPTYQDEYKMFMEWLKNKKNHANIQLQRSPDEGDEKIQDTAASEAPQVTT
SPILDTTIRTTSERPVVELAKTLTTQVPELPEYDALEDGEQNPDTRTDEA
LESTSTTTDPIATTTEVAELEETTTDVIPTIPETTTTVDEMADTTTVKDA
LADTTTSVPLNNQEEAREIVKIKGFLYRKVPIKVTELMKSRTKPLEEQMG
IDSTDIAEEPTTAVVTEGFPETTTANDDDSTTEVPITTETATDKINEGLE
EDLEVSDEVSSKTTASPRVVKKINSFPRQRPGFFRRPFPLKKNRLHFLTL
SAPTQVPNIFSHSMPAQTVTHRSPGVFMFNGNHRNVMRNRQKLRPFATTE
PPASTTTTTTASPIEAQTTRRGWIPSRWRPAYRYTTSRKTTKIPILLNTD
RSSMESSFKPMMRVMSPTRSPQKPRTVEEIDETEEKLAEERRKRILKPKR
PVFIQQISPTIATEKDQPSTNRHRTTLLLKSVQPRRTLVTTTEAVEVPDT
TTEMETDTGETTASPTTSAPQEELTATTRVPNSPDFIPFLGEAIPIASED
IVMEEDGLIIHVEEFEAQVNPDSIIIESAEVTVEESDESTPDVKTFRPYP
YNIPKTLSSKYLNNQTSSNNDDHDIHLNIQEHPIHNSIYLDNQTSFSDNN
EDDIHHNIQEHPLHNSIHLDI

mRNA from alignment at scaffold473_size162088:127976..135611+

Legend: polypeptideexon

Hold the cursor over a type above to highlight its positions in the sequence below.

>snap_masked-scaffold473_size162088-processed-gene-0.11-mRNA-1 ID=snap_masked-scaffold473_size162088-processed-gene-0.11-mRNA-1|Name=snap_masked-scaffold473_size162088-processed-gene-0.11-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=7636bp|location=Sequence derived from alignment at scaffold473_size162088:127976..135611+ (Tigriopus kingsejongensis)
ATGCAAGAAGACCACCGACCCAGGGTCAGCCTCAACGAGTGAGGATCGTC
CTTAACCTGCCCCATAGCCAGCCTTGCCGACCGGAGATCATCCTCTTACC
CCACGGATCAGCCTCCCCGAGTGTTTTCCTCGACCTTGCCATGCGTTGAT
CCATATCTCGTCCATCCGGAATGCGACGCACCGGGAAAAAATCAATCTCA
TCCTGATCACCAGCCTCGTCCAGGGCAAGCCATCCTTGTCAAGTACCAGA
CTTTGTCTGTTGGAAACGAGTTGATATCGTGGAGGGTCAAGCAGTTTCCA
GTCACTCAGCCCAACAGAAGAGACACATCCCTAGCGATCGTTCTTCTTAA
GTCCAAACCCAATGTAGTTACACTTTTTAGCCCTTGGAAAAGCGCGGAAG
GATTGTTGGGGCGAGACCTCTTTGTGATTAAATGCAATAAATCTAGAATA
ACCCTCGAATGTTACCTACGTATCACCACTCATCAGTCACTGGTGAATGT
ATGTACCAATCCGAACCCTGTCTATAAATCAATGACCCGTCCTGAAGGTC
TACGTCAATGAGGTTGCACTTATTCAAGTCGAGTTGAGGTGCTCATAAAT
TGCACCTGAATTGATGGAAGCCCTGGAAGCAGGGCGAACATCAACGATTT
AATGTAATATTTCGCTAGTATTGTGAGTGGTGAGGAGGCGGAGAGAGGAG
GTGCACTCGACTCTCGCTTATCATTCCTTAATGGTGATCTGCACACTTCA
TTTTACAATCGTTAAAGAGAGAACCAAACAATACGAACTTTTTTATTTGT
AAATATTATGAATTGTCTTCCGGCATAGCTGGAGAGGTTGTTGGTCGGAA
GAGCTCAGCTTTGTCGGCTTTGGGTACCTCAAATCGAGGGCAGGATATTG
GACCGTTCTTTGAGTAACTAATGAAGGAGGCGTTAAGGGAGCCGATGTTC
AGATGAAGGATGGCATAGGTATCGTTTTCTTTGACAGTGGCTTAAAATCC
ATGGAGACGAGAATTTGATCAACTCGGGTAAAACTTCTGCCGATTTTTAA
GCTGGTAGGTGACAAATTGATGCTAGTTCCGAGTCTAGGACCATCGACTA
GGGTGAATATTTTTTCCGCGTGAATCACTTCTGTTAAAAACGGCAAGTCC
ATTGGGAGGATGTTCAGCAAAACTGTTCGCTTTCAACTCCTGAGGAATGA
GGATATCAATCTGTAGGTGGCACCTCAGAAGCCTTTGGTCAATTAGCCCT
GTAGTGTGGATAGGTACGTAAGCTGTTCATGAACAACTATATATCTGTAT
TAGTGCATGAAGTATGCTTATATGCAGACAAGCTCTTTTGTTTTGCGCCA
AAAGCAATCAATGCATCCCTAATTCTGACTTAAAGTGAATAACTGAACAA
CAACTCCAATGTGTTTTTCGAATCTTTTCAAAGCCGTTGTTTCAGCAAGG
CTTCCAAATGATTGGTTTGGATGAAAACGAATGAATCTCTCGGAGAAAAC
GAATGAATACCTCGGAGATACCTACAGTGTACATGCGACCTGGTTGACCG
AGCGACGTTCTCAATTGTTATTTTAATCCCTAAATCGAGATAAATATAGA
CACCATTACAAGAGCCAAAGGCCCAGGAATGCGATTGGCAAGGGAATGAG
GGACATGAAGTGAAACAACCGTACAACTGAATGAACAATGAGCAATTATT
AGTCCATGTACCATCATAAATATCAGTCTAAAGCTCTCCTTTCATAGTTT
TCAAGCATTTTCCATTAATTGGTCCGTCTTTGTCTATCTGCCTTGTCTCA
CCTGAATACCTTTTTATTCATTGAAAACGCCATTTTGAACACAATCTGAA
AATTTCCCAAATCAAAATTGAATCGAATCAATGTTCAAACAAATGAATCG
ATTCAATTTTCAAACAAATGAATCGATTCAATTTTCAAACAAATGAATCG
ATTCAATTTTCAAACAAATGAATCGATTCAATTTTCAAACAAATGAATCG
ATTCAATTTTCAAACAAATGAATCGATTCAATTTTCAAACAAATGAATCG
ATTCAATTTTCAAACAAATGAATCGATTCAATTTTCAAACAAATGAATCG
ATTCAATTTTCAAACAAATGAATCGATTCAATTTTCAAACAAATGAATCG
ATTCAATTTTCAAACAAATGAATCGATTCAATTTTCAAACAAATGAATCG
ATTCAATTTTCAAACAAATGAATCGAATCAATTCAAGCGACTAAATATGA
ATCACATCACCAATGCATGCATTTGGATTTATATGCTCTTGCTCTGTCTG
TTCACTCCAAAATAGACAATAATTATCTTCTCTTTTTTACATTCCATTCA
TCTGGTGTTTTACGCTCTCTATAGGTTCATCCAAAATCGTCCCAAGCCGG
GATTTTTGGATGACGAAATATTCAGATATGCCGTATAATTCAACACAAGA
TAAAAATCTAGCCTATCTCTGAGAAGTAGCTGAATTTTGAATAGCACATT
GGCGTGTATGGCAATAATTGAATTATGCATTTGAAACACATGAGCCATCC
TGGTCAAATGAAAGTTTTTCGGTGTCCACCAATGTCCGAGGGTGGTCAAC
TGGGTTCAGTTTCTCTTTCTACTTATTTTGGGCAGTAGTATCTCTTTCCA
ACACCCAATGATCTGAGTTGGATAAGATTTCTATTTCTAGCCCTTTTCAA
TAACGGGGTTTGCCCATTGCCTGTTTGTTTATCCTCTCTCTCTCTTTCCC
TCTCTTTGCCATGTTTGGCGGACTAATCGACTTGAACTTGGGGCTAAACA
ATGAATGCGGCTCCCAAGGCAACAACAACAGGAAAGGCTCATCAAAAAAC
TTTAACCCTGCTAGTTATGAGTGAGGCGGTGCATTGGGCGCAATTGGACC
TCCCTCACTGGGGGCAATTGATTTTCGCCCTTGGAGGGTCGAGGGAGATG
GGCTTGCATTCTCGTCAATTGGGGGGTTCATGGGCCAAGGACTGGAGAGC
TGGGCGGTGAGTGGATGGCGAGAGTTTCCTCGGGGAAGTGACGTCTTCAT
TGTTTCGAATTCAAGTGGGTGCCATACTCAATCCATGCCTGGGCAGCATC
GCTCTACCCCTGGGGTCAACCTAATTTGCAATGCAAATCTACCGCAAGCA
ACTTCATCAAACGTTCGAACATTGCGACAAAAAGGCAGATATTGACATTC
CAGGAGTGATCACCAGACCTGATCTCGGTGCACATTATTCCAACGAGATC
TCAATCGTTGGAGGGAAAAGCATCACTAAGCGGGATCGAGCCAGAGCATT
CCGTCCACTCACCGCATGAGAGTTGTCTCTCTCCCTGTCCAACGTTGTGG
AGGGTGATGGGTTGGGTGGGTGGTTGGTGGTTAGCTTGACTCTGCCCAAT
TCCTGGTTAGATGTTGACTCGAGTAATGCCAATCTTGATAGCTGAAAACC
TGGAAATCCACGAATTTCCCCGAGCGTCCGTCAACAAATCAGTTCCAGTT
GGGAGTTGGTGCGCAGAAGTTCTCCAGGCTTTCCCAGACGTGCTTATATG
GTCATTGACCCAACATACCCACAGCGATGGTATGGACTCCTATAAACTTG
ACTTATCTTTGATTGATACACAACAACCATATGATTTCATTTCAGATCCG
ACCGGTGTTGATGGCCACATTGGCCATCGTGGGACAGGCACAGTACTTAT
ACGCACCCTACGGCCTGGCCTCCGTGCCTGCGTCCCAAGAGGATGACTTC
AACCGAAACACTCACTCCCGACAGTATTGGTCGCCCTTTGGGAATTCTTA
CCAGCCTCAGGTGGTGAGACCCAACCAGTACTTTTCAAGACCCTCCTCCT
CCTCCTCTTCCTCATCCTACCCAAGCAACTATGGGTCCAGTGGGAGATTC
TCCTCGCCTTCCAGCTCATCATCACAAACGGGCTTCAACACTTTCCCATC
CTCGTCAGGATCATCTTCCGGAGGCAACAATGGTTACTCCACATACTACC
GAGAGGCTCCTCCCAAGCCGAGGGCCCCTACAAGTGTAAATCAGCAGTTC
CAATCTCGCCCTCAAATCATTGAACAACCACACCGGGTTTTTACCACCAA
AGCAGCCGCAGCACCCACGACACCCACCACCACTACCGAAACACCCACCA
CCACTACCACAACACCCACCACAACTAGCACTACACCCACCACCATTACC
ACCACAACTACCACAACCACTACAACCAGGTCCACAACCACCACAACCAG
GTCCACAACCACCTCTGCTGCTACCATCACGCCAACCCCTCTCATAACCA
CGAGTGAAACTCCCAAGCCAGTGGGAGATTTCCGAACTGATCCCACCTAC
CAAGATGAGTACAAAATGTTTATGGAGTGGTTGAAGAATAAGAAAAATCA
CGCCAACATCCAACTTCAAAGGAGTCCGGATGAGGGAGACGAGAAAATCC
AAGACACAGCTGCATCGGAAGCGCCCCAAGTGACGACAAGTCCAATCCTT
GACACAACAATCCGTACCACATCTGAGAGGCCAGTGGTTGAGTTAGCCAA
GACATTAACCACCCAAGTCCCTGAGCTTCCCGAGTATGATGCCCTTGAGG
ATGGTGAGCAGAATCCGGATACCAGGACGGATGAGGCTTTGGAAAGCACA
AGCACCACTACCGATCCCATAGCCACCACCACCGAAGTGGCTGAGCTCGA
AGAAACAACCACGGACGTCATTCCAACCATCCCCGAAACCACCACCACAG
TTGACGAGATGGCCGACACCACGACAGTTAAAGATGCACTGGCTGACACC
ACCACTTCAGTTCCCCTGAATAATCAGGAAGAGGCCAGAGAGATCGTCAA
GATCAAAGGGTTTCTGTATAGAAAAGTGCCGATCAAAGTCACCGAATTGA
TGAAGTCCAGGACGAAACCGCTGGAGGAGCAAATGGGGATCGACTCCACG
GATATCGCGGAAGAGCCAACCACCGCAGTAGTTACCGAGGGTTTCCCCGA
AACAACCACAGCCAATGATGACNCTCCACATACTACCGAGAGGCTCCTCC
CAAGCCGAGGGCCCCTACAAGTGTAAATCAGCAGTTCCAATCTCGCCCTC
AAATCATTGAACAACCACACCGGGTTTTTACCACCAAAGCAGCCGCAGCA
CCCACGACACCCACCACCACTACCGAAACACCCACCACCACTACCACAAC
ACCCACCACAACTAGCACTACACCCACCACCATTACCACCACAACTACCA
CAACCACTACAACCAGGTCCACAACCACCACAACCAGGTCCACAACCACC
TCTGCTGCTACCATCACGCCAACCCCTCTCATAACCACGAGTGAAACTCC
CAAGCCAGTGGGAGATTTCCGAACTGATCCCACCTACCAAGATGAGTACA
AAATGTTTATGGAGTGGTTGAAGAATAAGAAAAATCACGCCAACATCCAA
CTTCAAAGGAGTCCGGATGAGGGAGACGAGAAAATCCAAGACACAGCTGC
ATCGGAAGCGCCCCAAGTGACGACAAGTCCAATCCTTGACACAACAATCC
GTACCACATCTGAGAGGCCAGTGGTTGAGTTAGCCAAGACATTAACCACC
CAAGTCCCTGAGCTTCCCGAGTATGATGCCCTTGAGGATGGTGAGCAGAA
TCCGGATACCAGGACGGATGAGGCTTTGGAAAGCACAAGCACCACTACCG
ATCCCATAGCCACCACCACCGAAGTGGCTGAGCTCGAAGAAACAACCACG
GACGTCATTCCAACCATCCCCGAAACCACCACCACAGTTGACGAGATGGC
CGACACCACGACAGTTAAAGATGCACTGGCTGACACCACCACTTCAGTTC
CCCTGAATAATCAGGAAGAGGCCAGAGAGATCGTCAAGATCAAAGGGTTT
CTGTATAGAAAAGTGCCGATCAAAGTCACCGAATTGATGAAGTCCAGGAC
GAAACCGCTGGAGGAGCAAATGGGGATCGACTCCACGGATATCGCGGAAG
AGCCAACCACCGCAGTAGTTACCGAGGGTTTCCCCGAAACAACCACAGCC
AATGATGACGATTCGACCACGGAAGTTCCCATAACCACTGAGACAGCCAC
GGATAAGATCAACGAGGGGTTGGAAGAAGATCTCGAAGTGTCGGATGAAG
TGAGCAGCAAAACGACAGCCAGTCCAAGAGTGGTGAAGAAGATCAACAGT
TTCCCGAGGCAGCGACCCGGATTCTTCCGCCGTCCGTTTCCCCTCAAAAA
GAATCGACTCCATTTCCTCACCTTGTCCGCTCCCACCCAGGTTCCGAACA
TATTCAGCCATTCCATGCCTGCACAGACAGTCACTCACAGGTCCCCGGGT
GTGTTCATGTTCAATGGCAACCATCGGAATGTGATGCGGAACAGACAGAA
ATTGAGACCCTTCGCCACCACTGAGCCTCCTGCAAGTACCACAACGACCA
CAACGGCCTCGCCCATTGAAGCCCAGACAACTCGAAGAGGGTGGATCCCA
TCCCGATGGAGACCCGCCTATCGCTACACGACCTCTAGGAAAACAACCAA
GATCCCCATCCTCTTGAACACGGATCGATCCTCGATGGAAAGCAGCTTTA
AGCCCATGATGCGGGTGATGAGCCCCACGCGATCCCCACAGAAGCCAAGA
ACCGTAGAGGAAATTGACGAAACCGAGGAAAAGCTGGCTGAGGAGCGACG
GAAGAGGATTCTCAAACCCAAGCGACCGGTGTTCATCCAGCAAATCTCAC
CCACCATTGCCACGGAGAAGGATCAACCATCTACGAACCGCCATCGAACC
ACGTTGCTACTAAAAAGTGTTCAACCAAGAAGAACTCTCGTCACAACAAC
CGAGGCCGTGGAAGTCCCGGACACAACCACCGAAATGGAGACTGATACCG
GCGAGACAACGGCTTCTCCCACCACCAGTGCACCCCAGGAAGAATTAACC
GCAACCACTCGTGTTCCCAATTCCCCTGATTTTATTCCCTTCTTGGGCGA
GGCCATTCCAATCGCATCCGAGGACATCGTGATGGAGGAGGATGGATTGA
TCATCCACGTGGAGGAGTTCGAAGCTCAAGTCAATCCTGATAGCATAATC
ATTGAATCTGCAGAGGTAACAGTTGAGGAATCCGATGAGAGCACTCCGGA
TGTTAAGACATTCCGACCCTATCCCTACGTACACCGACCCCCATTTGAGC
ACAAATCCAAAAGTAGGAGGCCAACAACAGCATCCGCCTCTGAGCCCGGC
TCCGTTACTCCGGGTCCCAGGACAGTTACAACCCGAAGACAGTTTGGCTC
CACGGCATCCATCGTCAAAGTTGAGCGACCCGTTACCACCACGATCCGAT
CCAAGCCTTCCTCTACCACGATGGCGCCCACAACCACCACTCAAAAGCCT
ACTTCATCAACCAGGCGATCTAGAACATCCCGAAGACCCTCAGCTCCAAG
TACCTCAACAACCAAACGTCCTCCAACAATGACGACCACGATATTCACCT
CAACATCCAAGAGCACCCCATCCACAACAGCATCTACCTCGACAACCAAA
CGTCCTTCTCCGACAACAACGAAGACGATATCCATCACAACATCCAAGAG
CACCCCCTCCACAACAGCATCCACCTCGACATCTAA

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