snap_masked-scaffold474_size162001-processed-gene-0.15-mRNA-1, snap_masked-scaffold474_size162001-processed-gene-0.15-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namesnap_masked-scaffold474_size162001-processed-gene-0.15-mRNA-1
Unique Namesnap_masked-scaffold474_size162001-processed-gene-0.15-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold474_size162001supercontigscaffold474_size162001:142642..145546 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
mau2 chromatid cohesion factor homologsnap_masked-scaffold474_size162001-processed-gene-0.15Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
snap_masked-scaffold474_size162001-processed-gene-0.15-mRNA-1:exon:1352snap_masked-scaffold474_size162001-processed-gene-0.15-mRNA-1:exon:1352Tigriopus kingsejongensisexon
snap_masked-scaffold474_size162001-processed-gene-0.15-mRNA-1:exon:1353snap_masked-scaffold474_size162001-processed-gene-0.15-mRNA-1:exon:1353Tigriopus kingsejongensisexon
snap_masked-scaffold474_size162001-processed-gene-0.15-mRNA-1:exon:1354snap_masked-scaffold474_size162001-processed-gene-0.15-mRNA-1:exon:1354Tigriopus kingsejongensisexon
snap_masked-scaffold474_size162001-processed-gene-0.15-mRNA-1:exon:1355snap_masked-scaffold474_size162001-processed-gene-0.15-mRNA-1:exon:1355Tigriopus kingsejongensisexon
snap_masked-scaffold474_size162001-processed-gene-0.15-mRNA-1:exon:1356snap_masked-scaffold474_size162001-processed-gene-0.15-mRNA-1:exon:1356Tigriopus kingsejongensisexon
snap_masked-scaffold474_size162001-processed-gene-0.15-mRNA-1:exon:1357snap_masked-scaffold474_size162001-processed-gene-0.15-mRNA-1:exon:1357Tigriopus kingsejongensisexon
snap_masked-scaffold474_size162001-processed-gene-0.15-mRNA-1:exon:1358snap_masked-scaffold474_size162001-processed-gene-0.15-mRNA-1:exon:1358Tigriopus kingsejongensisexon
snap_masked-scaffold474_size162001-processed-gene-0.15-mRNA-1:exon:1359snap_masked-scaffold474_size162001-processed-gene-0.15-mRNA-1:exon:1359Tigriopus kingsejongensisexon
snap_masked-scaffold474_size162001-processed-gene-0.15-mRNA-1:five_prime_utrsnap_masked-scaffold474_size162001-processed-gene-0.15-mRNA-1:five_prime_utrTigriopus kingsejongensisexon
snap_masked-scaffold474_size162001-processed-gene-0.15-mRNA-1:cdssnap_masked-scaffold474_size162001-processed-gene-0.15-mRNA-1:cdsTigriopus kingsejongensisexon
snap_masked-scaffold474_size162001-processed-gene-0.15-mRNA-1:cdssnap_masked-scaffold474_size162001-processed-gene-0.15-mRNA-1:cds-2001691Tigriopus kingsejongensisexon
snap_masked-scaffold474_size162001-processed-gene-0.15-mRNA-1:cdssnap_masked-scaffold474_size162001-processed-gene-0.15-mRNA-1:cds-2001692Tigriopus kingsejongensisexon
snap_masked-scaffold474_size162001-processed-gene-0.15-mRNA-1:cdssnap_masked-scaffold474_size162001-processed-gene-0.15-mRNA-1:cds-2001693Tigriopus kingsejongensisexon
snap_masked-scaffold474_size162001-processed-gene-0.15-mRNA-1:cdssnap_masked-scaffold474_size162001-processed-gene-0.15-mRNA-1:cds-2001694Tigriopus kingsejongensisexon
snap_masked-scaffold474_size162001-processed-gene-0.15-mRNA-1:cdssnap_masked-scaffold474_size162001-processed-gene-0.15-mRNA-1:cds-2001695Tigriopus kingsejongensisexon
snap_masked-scaffold474_size162001-processed-gene-0.15-mRNA-1:cdssnap_masked-scaffold474_size162001-processed-gene-0.15-mRNA-1:cds-2001696Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto2001697auto2001697Tigriopus kingsejongensispolypeptide
Tk10279Tk10279Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk10279

>Tk10279 ID=Tk10279|Name=Tk10279|organism=Tigriopus kingsejongensis|type=polypeptide|length=490bp
LIDGRSAASAGPLAVMSGLEPAYVALLGLSEAFLQAGQVKRSLQCLQAVL
ALSPAPNVEARTHLQLGVLLQRRTQNRDLAKHHVEQAWYQSLKLSPQDED
VLFESGSVLAQIFQEDGQFNHVKQVLGQAIDLSPSHTYWHCRLLFQLAGI
HAQDKDYVSAVTILGAGVDFAFMAGANYTRLLFMLSKTMLLLLERKYAEA
NPLLHTTGPMIENWIQQNGHQKERVAQQQKEYLQMFFLVLQVCYYLMVGQ
VKSVKTVLKQLQQSIQTITAQGWPPDEEMVSTNPADNFQWLSKDHLCILV
YLVTVMHSMQAGYMDKAQKYTDKAIAQIDKLKNVDNRPILSSFHVLLLEH
IIQCRLVTGNKGGAIQELGHLCRLLEGNHLLLQRHRAQLHTLLGLYAMSM
NQMDWAETQLNAALRTSQERELWTFANLNLAIVYLRSRRDADFVALLDRI
SPERLPSQSHSLQAAAYYIQGLQAFFAAKYNDSKLVPDVR
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mRNA from alignment at scaffold474_size162001:142642..145546+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold474_size162001-processed-gene-0.15-mRNA-1 ID=snap_masked-scaffold474_size162001-processed-gene-0.15-mRNA-1|Name=snap_masked-scaffold474_size162001-processed-gene-0.15-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=2905bp|location=Sequence derived from alignment at scaffold474_size162001:142642..145546+ (Tigriopus kingsejongensis)
CCCGCCCCGTGTCCCGCCCCGTGTCCCGCCCCGTGTTTCGCCGGTTGCCG
CCGCTCCGGCCGGGTGTCCCGCCCTGATCGACGGTCGCTCCGCCGCCTCA
GCCGGGCCGCTGGCCGTCATGTCCGGCCTGGAACCCGCCTACGTGGCCCT
CCTGGGCCTGAGCGAGGCCTTCCTCCAGGCCGGTCAAGTCAAGCGGTCCC
TCCAGTGCCTGCAAGCCGTGCTGGCCTTGAGCCCCGCGCCCAACGTGGAG
GCCCGCACTCACCTGCAGTTGGGCGTGCTCTTGCAGCGGCGCACGCAGAA
CCGTGACCTGGCCAAGCATCATGTCGAACAAGCCGTAAGCCGCCGCCCGG
ACCCGTGGCCCGTCTCGCCCGCTCATCCCGTTGGTGTTTCGCTCTCTTGC
AGTGGTACCAATCGCTGAAGCTCTCGCCCCAGGACGAGGACGTGCTGTTC
GAGTCGGGCTCCGTTTTGGCCCAGATCTTCCAAGAGGATGGCCAATTCAA
CCATGTCAAGCAGGTCCTCGGCCAGGCCATCGATCTGTCCCCCAGCCACA
CCTACTGGCACTGCCGCCTCCTCTTCCAGTTGGCCGTAAGTTGCTCAGTT
CGGTATACCTAGCCCGCCTGCCGCCCGCCACCGGTTGCCTTTCCCCCCCT
AGGGCATCCACGCGCAGGACAAGGACTACGTGTCGGCCGTCACCATCCTG
GGTGCGGGCGTGGATTTCGCCTTCATGGCCGGGGCCAACTACACCCGCCT
CCTCTTCATGCTCAGCAAAACCATGGTAAGCCGCCCGGGCGCCCTCGTCC
CGCCGTCGCCCTCACTCACCCCGTGATCGACCTCCGTCTCTAGTTGCTCC
TGCTCGAACGCAAGTACGCCGAGGCCAATCCGCTCCTCCACACCACCGGG
CCCATGATTGAGAACTGGATCCAGCAGAACGGTCACCAAAAAGAGCGCGT
GGCCCAACAGCAGAAAGAGTACCTCCAGATGTTCTTCCTGGTGCTCCAGG
TGGGTGTCCGGTTGAGACTGCGGTCGCGGCCGCGCGACTCACGGCCGGGG
TCCCCTTTTTCAGGTCTGCTACTACCTCATGGTCGGTCAAGTCAAGTCCG
TCAAGACGGTTCTCAAACAACTCCAGCAATCCATACAGACCATCACCGCC
CAGGGCTGGCCGCCGGATGAAGAAATGGTCTCGACCAATCCGGCCGATAA
CTTCCAGTGGTTGTCCAAGGACCATCTGTGTATTCTGGTATACTTGGTCA
CCGTCATGCATAGTATGCAGGTAGGTCGGGCCTCGGGCCGCGTCCTGTTC
CGCCGCCGCTACAGCGCTTAATGTACCCAGGGGGGGCTCCACTCTAGGCA
GGCTACATGGATAAGGCCCAGAAGTATACGGACAAGGCCATCGCCCAGAT
TGACAAGCTCAAAAATGTGGACAATCGGCCGATTCTCTCCTCTTTCCACG
TGCTGCTCCTCGAACACATCATCCAATGCCGGCTGGTCACGGGCAATAAA
GGGGGAGCCATTCAGGAGCTGGGGCATCTCTGCCGCTTACTCGAGGGCAA
TCACCTGCTCCTCCAGCGGCATCGCGCCCAGCTTCACACGCTCCTCGGCC
TCTACGCCATGAGTATGAACCAAATGGACTGGGCCGAAACGCAGCTCAAC
GCAGCCCTCCGGGTAAGTTTAACTGTAAGTAGACTCATCGACCGGATCAG
GCTCGATTTCGTCCCATGCCCATGCGGTGTTTCTGCTCTTAGACATCCCA
AGAGCGCGAGCTGTGGACGTTCGCCAATCTCAACTTGGCCATCGTGTACC
TGAGAAGCCGGCGAGATGCAGACTTTGTGGCCCTCTTGGACCGGATATCC
CCGGAGCGACTTCCGTCACAATCTCACAGCCTTCAGGCAGCCGCCTATTA
CATTCAAGGACTTCAAGCCTTCTTCGCCGCCAAATACAACGATTCCAAGT
AAGATTCTGCTTGGAGAGGGTTCTTTACGAGATTGCGAGATCCCTGGCTT
GGCCAGGCTCTCCCAGACAACGACATTCCTTTATATCCAGCTCAATGAAT
GCTCCAGAGCATTCATGAAAGCCAGTCCCATCTTCTCTTCGCACAACCGA
TCCAATGCTGTTGTAAAACTGAATGATTTCATCCAGGATCCTCTTCGCTT
TCAGACGATATTTGCGTGAAACCTTGAAGATGGCCAATGCAGAAGATTTG
AACCGCCTCACTTCCTGCTCGCTGGTGCTCCTTGGGCACATATTTTTGTC
GTTGGGCAATTCTCGCGAGTCGATGAACATGGTCACACCGGCCATGCAGT
TGGCCTCTAAGATTCCCGACGTCAATGTCCAACTCTGGGCTTCGGCGATT
CTAAAAGGCAAGAACTTGTAGCTGCCCAGTGGCTCCAACATGGCTGTATC
TAATGCGGTCTCCCCTTTTCCCTATTTCCAGACTTGTACCGGATGTCAGG
TGATCACATGCGGGAGCAAGAAGGACTTCAAATGCACACGGGCTATTCGC
AAGTCCTGCTCGAGGACCATTTCCGAGCCACCCAATTGCCGGAACATAAC
CTCATACAGTGGACCGACGGTCCGTTCCCTCAATTTCCTCCCTCGGCCCC
AATCGGCAACTCCACCCCACTCTCGGGGGGTGGAAGCACGCCCAGCGAAG
TGGGCAACAGCCAAAGCCAGTTTTAGCACCCTGCCCCGCGTCCATAAGCT
TCATGCGAAGACACGATTGGTCCAATCCATGGCGCTCAATGACGAGGCTA
ATTCCATCAGCGGCCGAGCAAGAGGTGGACAATAGATCGTCGCAGGTTCC
TTCCCATGACAATACAATCCTTCAGTACAAATTCGTGTCACACTCTCCAA
ATTTAAACTATTTTTCCATTTCTGTTGTTTTTGAATACGAGATACAAACA
CCAAA
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