|
|
Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold475_size161908 | supercontig | scaffold475_size161908:60414..66197 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| maker | 2018-02-12 .496401 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| snap_masked-scaffold475_size161908-processed-gene-0.4-mRNA-1:exon:122 | snap_masked-scaffold475_size161908-processed-gene-0.4-mRNA-1:exon:122 | Tigriopus kingsejongensis | exon |
| snap_masked-scaffold475_size161908-processed-gene-0.4-mRNA-1:cds | snap_masked-scaffold475_size161908-processed-gene-0.4-mRNA-1:cds | Tigriopus kingsejongensis | exon |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of Tk07976 >Tk07976 ID=Tk07976|Name=Tk07976|organism=Tigriopus kingsejongensis|type=polypeptide|length=1927bp
MSGSTWLWARVILLALTLFEGSSARAQDIVKEFSDEYAWNDNEIPQFNNL
VIDKVTGRVYIGAVNKLYQMSPDLELTVSAITGPKEDSPICSVLPDCPQT
VEKKLTNNVNKALVIDYAESRLIECGSLFQGVCTVRNQRNISLVEKNVRE
PVVANNATATTVAFIAPGPDNPPITQVLYVGATFTGNGPYRSEVPAVSSR
SLNSDSLFEIAQMAVTTGTRMHVNSLERERYPINYIYGFSSEGFSYFLTT
QMKETDSSPFQSKLVRVCQNDKDYYSYTEIPIECISNSPIKDYNLAQAAF
VGKPGSDLASNLGITAQDDVLYAVFSESDSAQGDITSKASKNSALCVYSL
KSIRRKFMQNIQRCFTGTGSRGLGFISPSLLCINTKLTQISEEFCGLDVN
TPLGGELPVVTQPVLTFDSHLTAVTATSTGDYTVAFLGTGDGYLKKVVIE
SDSSGMEYANIPIAVGHGINSDILFDLKQNHVYAMSDKKLSKVRVQDCTV
YTTCGECLGSKDPYCGWCSLENKCSLRGDCRDAAQDPLYWISYKSGRCTT
ITSVQPNDLQRTTARTLDLAIDNLPSLPGKFLCVFEAMGKTLTTNANRTA
NGASCTTPRNDLLPMIPSGKHHFTSKLSVKLAEGPDFVSTNFTFFDCNTF
SSCTSCVSSPFPCDWCVDGHRCTHDTAENCRNDILVNGIKRVGPSIRSGP
NFCPRVNSIIDGNSEILVPSGIKKAIEVKVDNIATFILQNRFVCQFNIEG
RVTSVNAQLLGDIIYCDKMEFAYTSRSPNISATFAVIWGGSKPLDNPNQI
HVLIYRCKEMADNCGKCLSLDEKFECGWCQSSEKCEVKEKCGKVATSWLN
RDQTCPNPRILSFEPTLGPWEGGTNITIRGINLGKEFRDIYGGITVAGIQ
CDPYEALYVKTEEIVCKVDGPGTKEPRSGPVIVKVADFRGESKQNYEFID
PEIKAIRPRRGPMSGGTRIKILGEHMNAGSHIEAFIGDAPCKIVETRRDK
AICITGASNSLTKAEVRMVFDKGTRVLPGRRYEYVEDPKIDYADSGNSGV
RKIPKGIPSGGINITVVGANFNYIQDPKMYVIYQDQRHEGPCMVLDNRKM
HCKSPKIEAPIAWRSIENPDPLKLDFGFVMDSVTRVQNLSKVLNSQVLIY
PDPEFNKFEENDGIKYYKSDYLTLNGKNLNRASRETDIKVRIGSEFCNVT
SLSLKQLTCKPPEDQPPAWIDGEENYDELPDVVVSIGDNLKYNIGKLSYN
MGGEGQLSTPVLVGLVVVAAILVMIVICILILYRRKSSESSRVLKNMQEQ
MDVLELRVAAECKEAFTELQTEITELGIELQQGGIPFLDYRTYCVKILFP
SVQDHSVLQWDRPELQRKEKGLRMFGQLIMNKTFLVLFIRTLESNRYFSM
RDRVNVASLIMVTLQSRMEYCTDILKTLLGDLIDRCMDGKSHPKLLLRRT
ESVAEKMLSSWFTFLLYKFLHECAGEPLYMLYCAIKHQVDKGPVDNITHE
ARYSLSEEKLIRQQIEYRQVTVYVSMSPQTIYMSGLDPQGDNMDIPVRVL
DCDSISQVKEKSLDTVYRAFPYSQRPKKEDLDLEWRTGTTGRLILYDEDS
TTKTEGDWKRVNTLNHYRVPDGALLTLVPKQSSMYNISTMSDKSDRHLYH
KYETLNLSKMGANHSPQLSRATSPLNQEYDNGLKVWHLVRHEWDNDKDGE
RHNKMVSEIYLTRLLSTKGTLQKFVDDLFETIFSTAHRGSALPLAIKYLF
DFLDDQALQHGITDDEVVHTWKSNSLPLRFWVNLIKNPDFVFDIGKSNIV
DSCLSVTAQTFMDACSTSENILGKDSPSSKLLYAKDIPVYKDWVDRYYSD
IKNMPIISDQDMNAMLAEESRLHANEFNLNSALHELYQYAVKYNEQLILT
LEEDEFSCKQRLAYKLGQVHNVMQSSD back to topmRNA from alignment at scaffold475_size161908:60414..66197+ Legend: polypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >snap_masked-scaffold475_size161908-processed-gene-0.4-mRNA-1 ID=snap_masked-scaffold475_size161908-processed-gene-0.4-mRNA-1|Name=snap_masked-scaffold475_size161908-processed-gene-0.4-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=5784bp|location=Sequence derived from alignment at scaffold475_size161908:60414..66197+ (Tigriopus kingsejongensis)
ATGAGCGGGTCGACCTGGCTCTGGGCGAGGGTGATCCTCCTGGCCCTCAC
CTTGTTTGAAGGCTCATCGGCCCGAGCCCAGGATATCGTGAAGGAATTCA
GCGACGAGTACGCCTGGAATGACAACGAGATCCCTCAGTTCAACAACCTG
GTCATCGACAAGGTCACCGGGCGCGTGTACATTGGGGCGGTGAATAAGCT
GTACCAAATGTCCCCGGACCTGGAACTGACCGTGTCCGCCATCACCGGGC
CCAAAGAGGACTCGCCCATCTGTAGCGTCTTGCCGGATTGCCCGCAGACC
GTGGAGAAGAAGCTCACGAACAATGTGAACAAGGCCCTGGTCATCGATTA
CGCCGAATCTCGGCTGATCGAGTGCGGCTCGCTCTTCCAAGGCGTGTGCA
CAGTGCGGAATCAGCGTAACATATCTCTGGTGGAGAAGAACGTACGGGAG
CCCGTGGTGGCCAACAATGCCACGGCGACCACGGTGGCCTTCATCGCTCC
GGGTCCGGACAATCCGCCCATCACTCAAGTACTCTATGTGGGTGCCACCT
TCACGGGAAACGGACCCTACCGCTCGGAGGTGCCCGCCGTCTCTTCGCGG
AGCCTCAACTCGGACTCGCTCTTTGAAATCGCTCAAATGGCCGTGACAAC
GGGTACTCGCATGCACGTGAACTCCTTGGAGCGGGAGAGGTATCCCATCA
ATTATATCTACGGCTTCAGCTCCGAGGGCTTCTCCTACTTCCTGACCACG
CAAATGAAAGAGACCGACTCGAGTCCGTTCCAATCCAAATTAGTGCGAGT
GTGTCAGAACGACAAGGACTACTACTCCTACACAGAGATCCCCATCGAGT
GCATCAGCAACAGTCCCATCAAGGACTACAACCTGGCCCAGGCTGCTTTT
GTGGGCAAGCCTGGCTCGGACTTAGCCTCCAATCTCGGGATCACGGCCCA
GGATGACGTGCTCTACGCCGTGTTCTCTGAGAGCGACTCTGCTCAGGGCG
ATATCACGTCCAAGGCCAGCAAGAATTCCGCTCTCTGCGTCTACTCGCTC
AAGAGCATTCGCCGGAAATTCATGCAGAACATCCAAAGATGTTTCACGGG
GACTGGATCTCGAGGACTCGGGTTCATCTCTCCCAGTTTGCTCTGTATCA
ACACCAAGCTCACTCAGATTAGCGAGGAATTTTGCGGGCTCGACGTGAAC
ACGCCCCTGGGCGGCGAGCTGCCCGTCGTGACACAGCCCGTGCTCACTTT
TGACTCGCATTTAACGGCGGTCACGGCCACCAGCACCGGTGACTACACGG
TGGCCTTCCTGGGGACGGGCGATGGCTACCTCAAGAAGGTGGTCATCGAG
TCTGATTCCAGCGGCATGGAGTACGCCAACATCCCGATTGCCGTCGGTCA
CGGCATCAATTCAGATATCCTCTTCGATCTCAAGCAGAATCACGTCTACG
CAATGTCCGACAAGAAGCTCTCCAAAGTGCGGGTCCAAGACTGCACGGTC
TACACGACCTGCGGCGAGTGCCTGGGCTCCAAGGATCCCTACTGCGGATG
GTGCTCTCTGGAGAACAAGTGCTCTCTCCGAGGCGATTGTCGCGATGCGG
CCCAGGATCCATTGTACTGGATCTCGTACAAATCCGGTCGCTGTACCACG
ATCACCTCGGTCCAGCCCAATGACCTGCAGCGAACCACTGCTCGGACTCT
GGACTTGGCCATCGACAACCTGCCCTCCCTCCCCGGGAAGTTTCTCTGCG
TGTTCGAAGCCATGGGCAAGACACTCACCACCAACGCCAACCGAACTGCC
AATGGAGCGAGTTGCACCACTCCGAGAAACGACCTCCTGCCCATGATCCC
ATCCGGGAAGCATCACTTCACCTCCAAGCTCTCGGTCAAATTGGCCGAGG
GTCCGGATTTCGTGTCCACGAACTTCACCTTCTTCGACTGCAACACGTTC
TCGTCTTGTACCTCGTGCGTGTCCTCGCCCTTCCCCTGCGATTGGTGCGT
GGATGGACACCGATGCACCCACGACACGGCCGAGAACTGTCGCAACGACA
TCCTGGTGAACGGGATCAAGCGGGTGGGTCCAAGTATACGCTCTGGTCCC
AATTTCTGTCCACGCGTGAACTCGATCATCGACGGGAACTCTGAGATCTT
GGTGCCCTCGGGGATCAAGAAAGCCATCGAGGTCAAAGTAGACAACATTG
CCACGTTCATCCTCCAGAATCGCTTCGTGTGCCAATTCAACATTGAGGGG
CGTGTCACCAGCGTCAACGCCCAGCTCCTCGGCGATATTATCTACTGTGA
CAAGATGGAATTCGCCTACACCTCACGCTCCCCAAACATCAGTGCCACGT
TCGCTGTCATTTGGGGCGGATCCAAGCCTCTGGACAACCCGAACCAGATC
CATGTGCTCATCTATCGCTGCAAGGAGATGGCTGACAACTGTGGCAAATG
TCTGTCCCTGGACGAGAAGTTCGAGTGTGGCTGGTGCCAGAGCTCGGAGA
AGTGTGAGGTCAAGGAGAAGTGTGGAAAAGTGGCCACATCTTGGCTTAAT
CGAGACCAGACGTGCCCCAATCCTCGTATCCTGTCGTTCGAACCCACATT
GGGCCCATGGGAGGGTGGGACGAACATAACCATTAGGGGAATCAATTTGG
GCAAGGAATTCCGAGACATTTATGGGGGCATCACCGTGGCCGGGATCCAA
TGTGATCCCTACGAGGCGCTCTACGTGAAGACCGAGGAGATTGTGTGCAA
GGTCGACGGTCCAGGAACAAAGGAACCCCGAAGTGGCCCGGTCATCGTCA
AGGTGGCTGACTTTCGGGGCGAGTCCAAGCAGAACTACGAGTTTATTGAT
CCCGAGATTAAGGCCATTCGACCGCGTCGCGGTCCCATGTCTGGGGGGAC
TCGCATTAAAATTCTGGGCGAGCACATGAATGCTGGTAGCCACATCGAAG
CCTTCATTGGGGATGCTCCCTGCAAGATCGTGGAGACACGAAGGGATAAG
GCCATCTGTATTACGGGCGCCTCAAACTCGCTGACAAAGGCTGAAGTTCG
AATGGTGTTTGACAAAGGGACTCGAGTCCTGCCTGGTCGACGCTACGAGT
ACGTGGAGGACCCCAAAATTGACTACGCCGACTCGGGAAACTCGGGTGTG
AGAAAAATCCCCAAAGGGATCCCGTCGGGAGGGATCAACATTACTGTGGT
TGGAGCCAATTTCAACTACATCCAGGACCCGAAAATGTACGTCATCTACC
AGGACCAACGCCACGAGGGACCCTGCATGGTTTTGGATAACCGAAAGATG
CACTGCAAGTCTCCGAAAATCGAGGCACCCATTGCTTGGCGGAGCATTGA
GAATCCCGATCCGCTCAAGCTCGACTTTGGGTTCGTTATGGACTCGGTGA
CGCGAGTGCAGAATCTCTCCAAGGTCCTCAACTCCCAGGTGCTCATCTAT
CCCGACCCCGAGTTCAACAAGTTCGAGGAGAACGACGGGATCAAGTACTA
CAAGAGCGACTATCTCACGCTGAACGGCAAGAATCTGAATCGAGCCAGCC
GCGAGACGGACATCAAGGTACGGATTGGCTCCGAGTTCTGCAATGTGACC
AGCCTCTCGCTGAAGCAATTGACATGCAAGCCACCCGAGGATCAACCCCC
GGCCTGGATTGATGGCGAGGAGAACTACGACGAGCTGCCCGACGTGGTGG
TGTCCATTGGCGACAATCTCAAGTACAACATCGGCAAGCTCAGCTACAAT
ATGGGCGGCGAGGGCCAGCTGTCCACACCCGTCCTCGTGGGCTTGGTCGT
GGTGGCTGCCATCCTCGTCATGATTGTGATCTGCATCCTGATCCTGTACC
GCCGAAAATCGTCGGAGAGCTCGCGCGTGCTCAAGAACATGCAGGAGCAG
ATGGACGTCCTGGAATTGCGCGTCGCCGCCGAGTGCAAGGAAGCCTTCAC
CGAGCTCCAGACCGAGATCACCGAGCTGGGCATCGAGCTCCAGCAGGGTG
GCATTCCCTTCCTGGACTACCGCACGTACTGCGTGAAGATTCTCTTTCCG
TCGGTCCAGGACCATTCGGTTCTTCAGTGGGATCGCCCGGAGCTCCAGCG
CAAGGAGAAAGGCCTTCGCATGTTCGGACAGTTGATCATGAACAAGACGT
TCCTGGTGCTCTTTATTCGCACCTTGGAGAGCAATCGCTACTTCTCCATG
CGCGACCGGGTGAACGTGGCCTCGCTCATTATGGTCACGCTCCAATCCCG
GATGGAGTACTGCACGGACATCCTGAAGACGCTCCTGGGTGATCTCATTG
ACCGTTGCATGGACGGCAAATCCCATCCCAAGCTGCTCCTCCGCCGTACA
GAGTCCGTGGCCGAGAAGATGCTCTCGTCGTGGTTCACGTTCTTGCTCTA
CAAGTTCCTCCATGAGTGTGCTGGAGAGCCCCTATACATGCTCTACTGTG
CCATCAAACACCAAGTGGACAAGGGACCTGTGGACAATATCACGCACGAG
GCCCGATACTCGCTCAGCGAGGAGAAGCTCATTCGCCAACAGATCGAGTA
TCGCCAAGTCACCGTGTACGTGTCCATGTCTCCTCAAACCATTTACATGT
CGGGTCTGGACCCGCAGGGCGACAACATGGACATTCCCGTCCGCGTGCTC
GACTGCGACTCCATCTCCCAGGTCAAGGAGAAGTCCCTCGACACCGTGTA
TAGGGCCTTTCCCTACAGCCAGCGGCCCAAGAAGGAGGATCTGGACCTGG
AGTGGCGCACGGGCACCACGGGCCGCCTCATTCTGTACGACGAAGACAGC
ACAACCAAGACCGAGGGCGACTGGAAGCGGGTCAACACGCTCAATCACTA
CCGCGTTCCAGACGGTGCTCTCCTCACGCTAGTCCCCAAGCAATCCAGTA
TGTACAACATATCCACCATGTCAGACAAGTCGGATCGACACTTGTACCAC
AAGTACGAGACCCTCAACCTCTCCAAAATGGGCGCCAACCACTCGCCGCA
GCTCAGTCGGGCCACCTCGCCGCTCAACCAGGAGTACGACAACGGGCTCA
AGGTGTGGCATTTGGTCCGGCACGAGTGGGACAACGACAAGGATGGGGAG
CGACACAACAAGATGGTGTCTGAGATCTATCTCACCCGCCTGCTCTCCAC
CAAGGGCACCCTCCAGAAGTTTGTCGACGACCTCTTCGAGACAATCTTCA
GCACGGCCCACCGAGGGAGTGCCCTCCCGCTGGCCATCAAGTATCTGTTC
GACTTCCTCGATGATCAGGCCCTGCAGCACGGCATCACCGATGATGAGGT
GGTCCACACCTGGAAGAGCAACAGTCTGCCCCTCAGGTTCTGGGTGAACC
TGATCAAGAATCCCGACTTTGTCTTCGACATCGGGAAGAGCAACATTGTG
GACAGCTGCCTCTCTGTCACCGCACAAACCTTCATGGACGCGTGCTCCAC
GTCGGAGAACATCCTGGGCAAGGACTCGCCCAGCTCCAAGCTCCTCTACG
CCAAGGACATTCCCGTGTACAAGGACTGGGTGGACCGATATTATAGTGAT
ATCAAGAACATGCCCATCATCTCCGACCAGGACATGAACGCCATGCTGGC
CGAGGAGTCCCGACTCCATGCCAATGAATTCAACCTGAATAGTGCGCTCC
ACGAGCTCTACCAGTACGCTGTTAAATATAACGAACAATTAATACTCACG
TTGGAAGAGGACGAGTTCAGCTGCAAGCAGCGACTCGCTTACAAGCTAGG
ACAAGTCCACAATGTCATGCAGAGCAGCGACTGA back to top
|
