snap_masked-scaffold50_size457468-processed-gene-0.5-mRNA-1, snap_masked-scaffold50_size457468-processed-gene-0.5-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namesnap_masked-scaffold50_size457468-processed-gene-0.5-mRNA-1
Unique Namesnap_masked-scaffold50_size457468-processed-gene-0.5-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold50_size457468supercontigscaffold50_size457468:48471..54720 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
80 kda mcm3-associated partialsnap_masked-scaffold50_size457468-processed-gene-0.5Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
snap_masked-scaffold50_size457468-processed-gene-0.5-mRNA-1:exon:259snap_masked-scaffold50_size457468-processed-gene-0.5-mRNA-1:exon:259Tigriopus kingsejongensisexon
snap_masked-scaffold50_size457468-processed-gene-0.5-mRNA-1:exon:260snap_masked-scaffold50_size457468-processed-gene-0.5-mRNA-1:exon:260Tigriopus kingsejongensisexon
snap_masked-scaffold50_size457468-processed-gene-0.5-mRNA-1:exon:261snap_masked-scaffold50_size457468-processed-gene-0.5-mRNA-1:exon:261Tigriopus kingsejongensisexon
snap_masked-scaffold50_size457468-processed-gene-0.5-mRNA-1:exon:262snap_masked-scaffold50_size457468-processed-gene-0.5-mRNA-1:exon:262Tigriopus kingsejongensisexon
snap_masked-scaffold50_size457468-processed-gene-0.5-mRNA-1:cdssnap_masked-scaffold50_size457468-processed-gene-0.5-mRNA-1:cdsTigriopus kingsejongensisexon
snap_masked-scaffold50_size457468-processed-gene-0.5-mRNA-1:cdssnap_masked-scaffold50_size457468-processed-gene-0.5-mRNA-1:cds-1977910Tigriopus kingsejongensisexon
snap_masked-scaffold50_size457468-processed-gene-0.5-mRNA-1:cdssnap_masked-scaffold50_size457468-processed-gene-0.5-mRNA-1:cds-1977911Tigriopus kingsejongensisexon
snap_masked-scaffold50_size457468-processed-gene-0.5-mRNA-1:cdssnap_masked-scaffold50_size457468-processed-gene-0.5-mRNA-1:cds-1977912Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1977913auto1977913Tigriopus kingsejongensispolypeptide
Tk03199Tk03199Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk03199

>Tk03199 ID=Tk03199|Name=Tk03199|organism=Tigriopus kingsejongensis|type=polypeptide|length=1612bp
MDPPGGGPALPGGFPPPSYAPGGKRKLGGGANRFSPMGLKRRGGDNQPMG
LEGMPPIPGLSSGGPPAPLFQRPPPPNYSLSPFDPTQSGDGPSPLMGSPQ
SLPKTFGSGPVGPTRSGSNLFSTSGGPKPPNPGPFSAPPPEPPPKATPNP
FDTPPPSKLFESGPPSNLFGPSETKKPATNLFHKMEPTLSQPNPFAVTEP
TLFPSPGTQPLFASQPVLPEPTVSKPKKKPEPLFPPTVSESSNPFAKPQG
GGINRFSMASEGSSMTSRLFSRPADKTKEPPAIVKEHPEPPPKEPMMAAA
TESKAFKPENERELVEIVKSQSFNDSDRFNILDARDKLMRIRGQDRQGTI
LTGTCPDMCPEKERYSRLAKNQLRTYEKLSGAINHKATVKEYSRSSADQE
IPLPHDLRPSPVLDQTLNHIMCNIIDRIGNRCGTVLEWYDHITTGQEIEQ
EWVENPGEWFEYIWSTTRGIRKDITQQMLHDRLAVSLVEKCTRLHIICAE
RLIEENSHNFDRKLNDENLTKCLQTLSHMYEDCHLEGVELTSEPEFRAYE
VLMNLNDGDTLRHIQNLDPWIRKSEQVRFAVKIFMALGSNNYIKFFKLVR
KATLLQGCILLRYFYQVRFRALNTILRAYCPNKKVAVNFSLTNLTYVLGF
EDIQECKSFCQWHGLTSEVNEDKIALDRQRFINPEEVPVVKRARNIIESK
KLVSWSEVMNSGPLPENPYLRYNPHDSFDGQGYLKKDAWQALDQTRNQAP
LSPEDVKRRYFEQSVQAVSKAVQEEIISQVLEEETVKVANGCERYMEQLK
ISAEIGREEFDTSVQVEVALVVGQALRELRNEEIQKRLAREVRQSENVEV
AEDAFESIVDEISLEVGQEEMEIAEKEKKIAKSLETGKDIIDHLCADVIK
TEASRIAQEALAQAETDRDLAINRIRLRRQRKIQTDIFNNWRLWARKQVQ
RAKVLSNFPSRPSDLSLSEQLKRLGPKNGTQSVLESLERHTLTSNLLAAQ
DIEDKILRELILQPIDFPSLLGKNLSKVQKKLSLVWKCILCRPIIGEESE
DNHLFVQMMKRKLTREHRKDRSFTIPFGFQTISICIREVDTEVLEEDITL
SEQKRREYLNGTLGILFIDLQAEESMEASRNRLKQLIEQLPQIPKIPVSV
ITDRPHKDKYSYDIGLVEIKSDGKISAFHVIHTPANVYELASIQSLDSSI
AHLSEFLPELNLQDMTFQGLKDLAEDFVCSNVIVPMYENYMDRKRKDLPH
QNPNLLIEFFNSSLDYLVQVSSQLELAEISWPAPEVQNEIPSYWNDSIYI
DAIGQNIKAMKLPTMDNLEEPLTWGEQCHMIFAYFKGLNVDSQCLSQVRR
RLLKCFRQFNCQDELAEFPSDFLPWTDLIKIAIDTRMSALDTHDPYDQET
EASAIVGVFKEELKAFRPPAAWMRSRGYIPESRSQTIQDQFNQTLSKSFS
SRAQTFSDEKLRGDLQNEVDSSQLFESKLKAALDPGRSLVLANRSLPILE
PNGPAPESRGARYEPVIAYFSPSLAQRATGKHRWRRVENRENCEIIPDIT
TPEPKKRKNLFKEEFQVGSEQTSASKRVNRKEIRDLQGKIEEDLNASYDF
EQRLQSALYHQS
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mRNA from alignment at scaffold50_size457468:48471..54720+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold50_size457468-processed-gene-0.5-mRNA-1 ID=snap_masked-scaffold50_size457468-processed-gene-0.5-mRNA-1|Name=snap_masked-scaffold50_size457468-processed-gene-0.5-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=6250bp|location=Sequence derived from alignment at scaffold50_size457468:48471..54720+ (Tigriopus kingsejongensis)
ATGGATCCACCCGGAGGCGGGCCCGCCCTACCCGGTGGGTTCCCACCGCC
GTCCTACGCCCCCGGAGGCAAGCGCAAGTTGGGCGGGGGTGCCAATCGCT
TTAGTCCCATGGGCCTCAAGCGGCGAGGCGGAGGTAAGCCACCCCAATTC
GGAGAAGTTTCTTAGGCCATTGTGAGATTGTGGTCACGCTGAAGGCGGTG
CTCCTGCTTGTACTTGGTGTACCACCTCCAGTATGTATATATGCTCGTGT
CTCCACTAATCAACATCAGTCTGGTCACATCCATCGGAGTGACGGTTGTT
ACAGCCATGGACCACTGAACAGGCCTGGATGCGTAAAATATGGGTGCAAT
ATCATGTTTTTTTACCTTTCAACTTCTCTTCTCAACTGCCAGGGAGTCGA
AGTCAAGTTTTTGGAAAACCTTCTTTACCTTTAGTGGGGTATAACTTGAA
CATGATGCCCATAAATAGGTAGATTGGGTAGAAAAGAGTGAAACGGGAGA
AACTTGAATTCGAGCGTGATCGAGCATTGTATGCGGGAAAGGAAGTTATA
CACAGCGGTCACATCTTGAGGCAGGGTCCCTTCTGGTTCCCCACAAATTA
AAGTTGTGGTTGGAACTGGATTGTACCGGGCTGCACGCCGACAAGCTAAA
TTAGCTAAAAACGTCAGTGGGCCCTGTGTTCCCATGGGTGCTCCATCGTG
CGAACACGAAACCAGCGGAAGGTGCGATAACACACACAGGCCCACGGGAC
TTACTATGAAATGCGAGAACCTACCGTTTCGAGCTTTTGGATGGCCAATA
TTGGCAGTTATGGCTCATAAAATTAACATGGTTACTGTTAAGACGGCTGC
CAAGAATATGTCAGCTCTGACATGGCCTAGAAGGCATTTCTAATCCAGAT
GATGCAGTAGTTCGTGCTCAACTCATTCTTGATGGTTCCCTTTCTTGCAG
ACAACCAGCCCATGGGTCTGGAAGGCATGCCACCCATCCCTGGCCTGAGC
TCGGGAGGTCCACCCGCCCCATTGTTCCAGCGTCCACCCCCGCCCAATTA
CTCCCTCTCGCCTTTTGATCCGACTCAATCCGGCGATGGGCCGAGCCCAT
TGATGGGGTCACCCCAGAGTTTACCCAAAACCTTTGGCTCAGGGCCGGTT
GGCCCGACCCGGAGCGGTTCCAACCTATTTTCGACCTCGGGTGGACCGAA
ACCACCCAATCCGGGTCCCTTTTCCGCCCCTCCGCCCGAGGTCAACCCAT
TTTTGGCGACTTCCTCAGTTGGTGCACCCGCCCCACTCTTCCAACGTCCA
CCCCCGCCCAACTACTCGCTCTCACCCTTCGATTCCACTCAGACCGGCGA
TAGCCCCAGTTCATTGATGGGTGGTCCACCCAAAAGTGGACCCAAGTCAT
CGGGTCCCATCTCCGATCTACCTGCTTGGGCCCGACAGCCCTTTGGCCAG
CCGCAGGCGCCCATTCCCTCGGCTTCCGGGGGGGCTCACAGTGGGTCTAA
TTTATTTTCCACCCCGCGTGAATCTCAACCGCCGCCTCTAGGGGCCTTTT
CCGCCCCTCCTTCCGAAGGGAATCCCTTTATGGCGCCTTCCGAGCGTGAA
CCGGCACTCTTGTTCACCCAGCCTCCGCCCAAGGCCACGCCCAACCCTTT
CGATACGCCACCACCGTCTAAGCTCTTCGAGAGCGGACCCCCGTCCAATC
TATTCGGCCCCTCAGAGACGAAAAAGCCCGCCACTAATTTGTTTCACAAA
ATGGAACCCACCTTGAGCCAGCCCAATCCATTTGCTGTGACGGAACCGAC
ATTGTTCCCATCGCCTGGGACCCAGCCCTTATTTGCCTCCCAACCCGTTC
TACCCGAGCCGACAGGTAAGCCAATTGATTATATACAGATTACAGATACC
TAGACATAAAAACTATCCAATTTCGTCCATTTTTCCTCGAAATATTTGCG
TTTTATATGATCTTCGTGTGTATTTCAGAGAATGTCTGTTGTCTGGAATG
AGTTGCTCCTTATTTTACCTTATGACTACGTGTATGTTTAAGTGTATCGT
ATTTTCAAAGTCGACTTATTGCTTTCAGTTTCCAAGCCGAAGAAGAAGCC
TGAGCCGTTGTTTCCCCCCACTGTCTCTGAAAGCTCCAATCCCTTTGCCA
AACCTCAAGGCGGAGGCATCAATCGGTTCTCCATGGCATCCGAGGGATCG
TCGATGACCTCGAGACTATTCTCACGGCCGGCAGATAAAACCAAGGAGCC
ACCTGCCATCGTCAAGGAACACCCAGAGCCCCCTCCCAAGGAACCGATGA
TGGCAGCAGCGACCGAATCCAAGGCTTTCAAGCCGGAAAATGAACGGGAA
CTGGTTGAGATTGTCAAGTCGCAGAGCTTCAACGACAGCGATCGCTTCAA
CATCCTGGATGCTCGTGACAAGCTGATGCGAATTCGAGGGCAGGATCGAC
AGGGAACCATTCTGACAGGGACTTGCCCCGATATGTGCCCGGAGAAGGAG
CGCTACTCTCGATTGGCCAAAAATCAACTCCGCACGTACGAGAAACTCAG
TGGGGCCATCAATCACAAAGCCACCGTGAAGGAGTACTCCCGATCGTCGG
CTGACCAAGAAATCCCTTTGCCCCATGATCTGAGGCCTTCTCCGGTGCTG
GACCAGACCTTGAATCACATCATGTGCAACATTATCGACCGCATCGGCAA
CCGTTGTGGCACCGTCCTCGAGTGGTATGATCATATAACCACTGGTCAGG
AGATCGAACAGGAATGGGTGGAGAATCCTGGTGAGTGGTTCGAGTACATT
TGGAGTACCACGCGAGGGATCCGGAAGGACATTACTCAGCAAATGCTTCA
CGATCGCTTGGCCGTGAGTTTGGTGGAAAAGTGCACTAGACTCCACATCA
TTTGCGCCGAAAGACTAATCGAGGAGAACAGCCATAACTTTGATCGGAAG
CTAAACGACGAGAATCTGACCAAATGCCTTCAGACCTTGTCCCACATGTA
CGAGGATTGTCATCTTGAAGGGGTCGAACTGACTTCAGAGCCCGAATTCC
GTGCCTACGAGGTGCTCATGAACTTGAACGACGGCGACACTTTAAGGCAC
ATTCAGAACCTGGATCCATGGATCCGCAAGAGTGAGCAGGTCCGATTTGC
CGTCAAAATCTTCATGGCTTTGGGCAGTAACAACTACATCAAGTTCTTCA
AGCTGGTGAGAAAAGCCACCTTGCTCCAAGGCTGCATACTTCTCCGGTAC
TTTTACCAAGTGCGCTTTCGGGCTTTAAACACCATACTCCGCGCATATTG
TCCTAACAAGAAGGTGGCCGTCAACTTCAGTCTCACCAACTTGACCTATG
TGCTCGGGTTCGAGGACATTCAGGAGTGCAAGTCCTTTTGCCAATGGCAC
GGGCTAACCTCCGAGGTCAACGAGGACAAGATCGCACTGGACAGGCAAAG
GTTCATCAATCCTGAGGAAGTCCCGGTCGTCAAAAGGGCCAGAAACATCA
TCGAGTCGAAGAAGCTGGTCAGCTGGTCAGAGGTGATGAACAGTGGACCG
CTGCCGGAGAATCCCTACCTTCGATATAATCCGCATGATAGCTTCGATGG
ACAAGGGTACCTCAAGAAAGACGCTTGGCAGGCCTTGGATCAAACCCGGA
ATCAAGCCCCTCTAAGTCCCGAGGATGTCAAGAGAAGATATTTCGAACAA
AGCGTACAAGCCGTGTCCAAAGCCGTTCAAGAGGAGATCATAAGCCAAGT
CTTGGAGGAAGAGACAGTCAAGGTGGCCAATGGGTGTGAGCGGTACATGG
AGCAATTGAAAATATCGGCGGAAATTGGCAGAGAAGAATTCGACACAAGC
GTTCAAGTCGAGGTGGCTTTGGTAGTGGGACAAGCTCTCCGAGAGCTGAG
GAACGAGGAAATCCAAAAGCGATTGGCCAGAGAGGTCCGACAGAGCGAGA
ATGTTGAGGTGGCCGAAGACGCCTTCGAAAGCATCGTCGATGAAATCAGT
CTGGAGGTCGGGCAAGAAGAGATGGAGATCGCGGAGAAGGAGAAGAAAAT
CGCCAAATCTCTCGAAACTGGCAAAGACATCATTGACCATCTGTGTGCAG
ATGTAATTAAAACAGAGGCATCCCGGATCGCCCAAGAGGCTCTCGCCCAA
GCCGAAACGGATCGAGACTTGGCCATCAATCGAATTCGCTTACGGCGCCA
AAGGAAGATCCAGACGGATATCTTCAACAATTGGAGGCTTTGGGCCAGGA
AGCAAGTCCAACGTGCCAAAGTCTTGTCCAATTTTCCCTCCAGACCATCC
GATCTATCGCTAAGCGAGCAATTGAAGCGCTTGGGACCCAAGAATGGCAC
TCAGTCCGTCCTTGAGTCACTCGAGAGGCATACTCTCACCTCCAATTTGC
TGGCCGCTCAAGATATCGAGGACAAAATACTCCGCGAATTAATCTTGCAG
CCCATCGATTTCCCCTCCCTCCTCGGGAAAAACCTCTCCAAGGTCCAGAA
GAAACTGAGCTTGGTGTGGAAATGCATCCTCTGTCGCCCAATTATTGGGG
AGGAATCCGAGGATAACCACCTCTTCGTGCAGATGATGAAGAGGAAATTG
ACCCGCGAGCATCGAAAGGATCGGAGCTTCACCATTCCCTTTGGCTTCCA
GACCATTTCCATTTGCATTCGGGAAGTTGATACAGAGGTGCTGGAGGAGG
ATATCACACTCAGTGAGCAAAAGCGCCGAGAATACCTCAATGGCACCTTG
GGAATCCTCTTCATCGACCTCCAAGCCGAGGAGTCCATGGAAGCATCTCG
GAACCGATTGAAGCAATTGATCGAGCAGCTTCCTCAGATTCCCAAGATTC
CCGTGTCGGTCATCACGGATCGTCCGCACAAGGATAAATATTCCTACGAT
ATTGGACTGGTCGAAATAAAGAGCGATGGGAAAATCTCGGCCTTTCACGT
CATCCACACCCCGGCTAATGTATATGAGCTGGCCTCGATCCAATCCTTGG
ATTCCTCCATTGCGCACCTGTCCGAATTCCTCCCCGAGCTCAATCTCCAG
GATATGACGTTTCAGGGTCTGAAAGACCTCGCTGAGGACTTTGTCTGCTC
CAATGTGATTGTCCCCATGTACGAGAACTACATGGATCGCAAGCGGAAGG
ACCTCCCCCATCAGAATCCCAATCTGCTCATCGAGTTCTTCAACTCGTCC
TTGGACTACTTGGTCCAGGTCAGCTCGCAGCTGGAACTAGCCGAGATCTC
TTGGCCCGCTCCAGAGGTCCAGAATGAGATCCCGAGCTATTGGAACGATT
CCATCTACATTGATGCCATAGGGCAGAACATCAAGGCCATGAAATTGCCC
ACCATGGACAATCTGGAGGAGCCCCTCACGTGGGGAGAGCAGTGCCACAT
GATATTTGCCTATTTCAAGGGCCTGAACGTGGACTCCCAATGCTTGAGCC
AGGTGCGCCGAAGATTGCTCAAATGCTTCCGCCAATTCAATTGCCAAGAC
GAGTTGGCGGAATTTCCGTCGGATTTCCTACCTTGGACCGACCTCATCAA
GATAGCCATTGACACAAGGATGTCTGCCTTGGACACCCATGACCCCTATG
ATCAAGAAACGGAGGCATCGGCCATTGTTGGTGTGTTCAAGGAGGAATTG
AAAGCCTTTCGTCCCCCTGCAGCGTGGATGAGATCCCGGGGCTACATCCC
CGAGAGCCGGAGCCAGACCATCCAGGATCAATTCAATCAGACTCTCTCCA
AGAGCTTCTCGAGTCGAGCGCAAACTTTCTCGGATGAGAAGCTCCGAGGT
GATCTCCAGAACGAAGTCGACAGTTCCCAATTGTTTGAAAGCAAACTCAA
AGCCGCTCTAGATCCCGGTCGAAGCTTGGTCCTCGCCAATCGATCCCTGC
CCATCCTGGAGCCGAATGGACCAGCGCCAGAGTCTCGAGGGGCGAGATAC
GAACCGGTGATCGCTTACTTCAGCCCCTCTTTGGCTCAGAGAGCGACGGG
AAAGCATCGCTGGAGGAGAGTGGAGAACCGAGAGAATTGCGAGATCATTC
CGGATATAACCACTCCAGAACCCAAGAAGAGGAAGAATCTATTCAAGGAA
GAGTTCCAAGTGGGATCCGAGCAAACCTCGGCGTCCAAACGAGTCAACCG
TAAAGAGATCCGGGATCTCCAAGGCAAGATCGAGGAGGATCTCAATGCTA
GTTACGACTTTGAACAAAGGCTCCAATCAGCCCTCTATCATCAATCATGA
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