snap_masked-scaffold546_size140615-processed-gene-0.15-mRNA-1, snap_masked-scaffold546_size140615-processed-gene-0.15-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview


Name	snap_masked-scaffold546_size140615-processed-gene-0.15-mRNA-1
Unique Name	snap_masked-scaffold546_size140615-processed-gene-0.15-mRNA-1
Type	mRNA
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold546_size140615	supercontig	scaffold546_size140615:14047..18997 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
hypothetical protein	snap_masked-scaffold546_size140615-processed-gene-0.15	Tigriopus kingsejongensis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
snap_masked-scaffold546_size140615-processed-gene-0.15-mRNA-1:exon:1563	snap_masked-scaffold546_size140615-processed-gene-0.15-mRNA-1:exon:1563	Tigriopus kingsejongensis	exon
snap_masked-scaffold546_size140615-processed-gene-0.15-mRNA-1:exon:1564	snap_masked-scaffold546_size140615-processed-gene-0.15-mRNA-1:exon:1564	Tigriopus kingsejongensis	exon
snap_masked-scaffold546_size140615-processed-gene-0.15-mRNA-1:cds	snap_masked-scaffold546_size140615-processed-gene-0.15-mRNA-1:cds	Tigriopus kingsejongensis	exon
snap_masked-scaffold546_size140615-processed-gene-0.15-mRNA-1:cds	snap_masked-scaffold546_size140615-processed-gene-0.15-mRNA-1:cds-1961952	Tigriopus kingsejongensis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto1961953	auto1961953	Tigriopus kingsejongensis	polypeptide
Tk00848	Tk00848	Tigriopus kingsejongensis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at scaffold546_size140615:14047..18997-

protein sequence of Tk00848

>Tk00848 ID=Tk00848|Name=Tk00848|organism=Tigriopus kingsejongensis|type=polypeptide|length=277bp
MYEIGSCIKVFVSVLSLLALATADRINPFDRQGRQGGGQGSGVDFSNCQN
DPETGFCCVESEEIVQTLKKDPILECTHKNIEKCHYTYVTQFEPAQEEVC
EENFEKSCQITFKQQAVEEQVKKCYRPLEKVCNGQGPEECRTVYESSCTT
KYIEKQPGKFVGDTSCEKLPIEICGAGCVTEEGPEECHDKTVTSLIDVPE
EVCDLNPQKTCKFQTKLVPKLKPEHECTIIPQEICNLKFTSPQQVDQPLK
TKWCLDPTPAAAGETYDENSAGAAPLG

mRNA from alignment at scaffold546_size140615:14047..18997-

Legend: polypeptideexon

Hold the cursor over a type above to highlight its positions in the sequence below.

>snap_masked-scaffold546_size140615-processed-gene-0.15-mRNA-1 ID=snap_masked-scaffold546_size140615-processed-gene-0.15-mRNA-1|Name=snap_masked-scaffold546_size140615-processed-gene-0.15-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=4951bp|location=Sequence derived from alignment at scaffold546_size140615:14047..18997- (Tigriopus kingsejongensis)
ATGTACGAGATCGGAAGTTGTATCAAAGTGAACCCAAAATCAATCTTTTG
TAGTTAGTCACGATTGATTACGAGTTACTGCCATTCTAGGGCCACTTTAC
GCATGTGACCTCTGACTTAGCCAAATATGATCCGATCTGGCATCCTTATC
CAGTACGTATTTTTGCGACGTTAATGAGCGTGTTTGTAGTCAATTTGAAC
CAAGTTTCGGAGGGGGGGGGGGGAATTTTGTCATTAGTCTTATATGAACA
CTGGAATTATAGCGACCTTTTTGAGTCCAAAAGAGAACCAATACATATCT
TCCCTCTTCCGGACATGCCATTAGCGATTAATCCAACTTGGATCCACTTG
GACCTGATGAGGACAATGATGCTTAATTTTGTGCGAGCTAAATTTCAGGC
ATCAGAGTGCGGAAAACAATGCGGTTAAAATAAATGGGATAATACAAGCC
GTTTACATAACGTACATGCAAAGTGGCCCAACTGAGAATCGTGGTTGTCT
TGCAGAGAAAGGGCTACATGAGCCCTGTAAACATGAGTTGTAATTGGTTT
GTTTTAATGGCTCAATATCTGGCTGGCTAGGCAATTCCTCTAGAGATTTC
GTCCCCCTTGACGAAATTTGTGATGAATTGATGGCTTAGCCCTCAAGGTA
CAGTATGGCCACAGGCTCGCTCATTTGAGCCGGTAAAGGCCAGCTCATCT
ATTACCTCTCAATTGGAATCTGACACTCGAATGTTCTGACAACTAAGGTC
TGGTCTAGAGGTTCCCACCCTGTGGAGGTACTAACTCCAAATGCTCTGGT
TAACCAGTTTGAACCGGTGGCCCAGGTAACCGTGCCAGATTTATTAAGGG
TCTCAGCTCTGAGGTTTGAACTGAGAATTAGGTCAACTGAAAATTCTCTT
GGAATCGATCTTGAGTGAATTGAAGAGCCTGTAATAGGGCACTCTTAAAG
CGTTATAGCGTAAAACATGAGGCTAAATCAATATAATAAAGAATATGTAC
CACACCATCGAGCAACACATATTTTTCACATTACTGTATAGGTTGTTTCT
CCATGTCATAGGCTACTAGTTTGGGAAACCTGTCCATTAATGACTTTCGG
CATAATTGCTTTCTTTAAGCGGCACAATTACCAGGCAAATATGAATCCAG
CTAAAGAACCGAAGCAGTTTACAGTGCATGTTTTGCGATTGTCCTTTATG
CACTGCCCCATAAAGGGCTTCCGATCTACCTTAAAGATGATACACAGCAT
CAAATCATTACTCCTGACCCTAAACTTTCCGTCTTTTTGCATAATTTGTT
TATTGTCACAATCTCACTGGCTTATATGGCAGTTGAGTACCTGACATAAC
CAGATCAGTTTCATTTACCGTAGATCAGTTTTTCGTCCCCAATGATCAGA
CCCCAAAAGACATTTTAGGTATCCGTTCAGCAATGTTGCACCATGCGGAT
CCGAAATGAAGAATTTGCTTCGAACTAGAGTCTGATCACTTCTTCTTCAT
TTCCGGTCAGGACTCAAAATTTGTATTTTTCGCTAACAATGTCAAGTGCA
TATAGTACAGATAATACCATCCAATAATTTACCCTGGAGGCCAAGAGCCC
ACGTTCTTCCCCGTTACACTCACACGGCAATCAAGATCGCAAAAATATTG
GCAAGAAATGCTCTCATCTGAGCCAGGAGTGAGGACGGCTCTACCAATTC
AAGTCATTGAATGAAAAAGTGTGTTCCTTCTTTCTACTCGGTTTCTACCA
ATTTTTTTTTTCTCGGGCCCGGACACTACAGTACATGTACTAGCAATATA
CTGCTGCAGTAGATGTTGATCCCCTGGGCAATGACTGAGTGTAAAATTCA
CACACTGAAAAAGAAAATGAATGATAATGATAATACACGATTACACACGC
ACACTTCCAACTATTGGTAACTCGGAGGACGGTTCAGACACTGAAATATG
ATGAAAGGCGCGTTTGTTTTGTGGTCGATGAACTGAGGTGAGTCACAATG
TGACATGTACCCCCTATTTAGTCATTACAAATACTGTAAGTAATGACAAC
TTCAAAGACATTTATCCTAATTCTGAGAGTAAGTGTCGGTACATTTTAAA
TAGATTCCAACCTTATAGTTATTACTTTTGAACATTAGTACATGCTCCAA
CCATTATTTAAGCTTATAATGATTTTAATTGTTTCAATACTCCTCACGGT
CATCAGAATACTCACGCCATTAACAGAAAGGAACCCATTTTTTGCTGATG
CATGCCCTAAGTAATACTCAATTCTGCCTTAAAACTAACCAATGTACACT
TCATGTTTTTAGCATGAGTCATATCCGAGTTTGTATTGTATTTAACCCAA
TATTCTCACCAGCATTGCCCTCAAGTCAAGGAGAACTGGGCACGCTAAAG
TTCATTTCAAATTACCAGTTTGAGACATGTCTTCTTCTGATTTGCCTGCA
GATACACTGAAGTGGCATTGGCCATCAATGTGGGATACCCTGTGGTTCAT
TCATTCCTCCGATTGAATATACCCAAGCGGAAGAGGCACTTCGATCGTTG
GGGTCTGAGGTGTGCTCAGGAGGTTAAAATTAGCCTTAGTGTGTCTTCTC
AGTGGTGAGTTGTCTATTGTGCATTATATTTCAAATGAACCTGTATGTAC
TCGTACACCAATTGATGTGTGGATTTTGTTTGATAGCGTAGTTAGCGCCT
GTCCAATTTAACGAGAATTCGATCATACCATCGGGGAACAAATTGGTTAA
GCTCAAGGGATTATCGCGATGATCTCGATAAGGAGACATAAACCGAGAGC
GAAGAACGTAGAATCGGCCAATGGGTCGTGTTAATCTCAAAACAAGAGCG
ATGATGATCCATGAGATTGAGTAGTCCTTCACATGTATTGTTTGATTGGG
ATATGAAGTACTGATTGAAATATACTGTAAATGAGTAAAAGTGATCCTGA
AACATGGACCTACAGATTTCGCAAGTCAAAGGAACTGGAAGTATCGTCTT
GGGAAAAAATCGATTCCACCGGTATTGTGGCTACCAAAAATAACCTGCTA
AGGTTCTAGCCAAACCACATGCATCCCGTGGAAAGTGCATCAGTGTAGTT
TAGTTCAGGAATGGACTTTATAGGAAGGGGGTTGTTCACCTAGGCTGCAC
ACAATTCACATACACGTGCGAACACGTTTTCCTGATTGTCCTCGTCCACT
AATATTATTAGGATGCATCCTCAAATGCATGGTCTACCTGACGCAACCAA
CGCAGCTCTGATGGCATCGTGAAAGGGGAAGAAGACGAATTCTCTCGCTT
CTCTCTCTCTCTCTTTCTCGGTCGGTCGGTCTTTGTAAGGACGGTAAAGG
TACAGTGGGCTCAATTGGCCTGGCGTACTTTACCCTGAAGGTGCCCATGT
GTACGTATGTGTGCATGCCAGAGAAAGAGGAAGCATTCAGAAGCCACGAT
GATACCCACAGTCGTCTTCGTCAAGCATTGGCGTCCAATCCTCGGCGGTC
GGTGCATGCCTCCCGTACGCACTCTTGTGTCATAAACGGCGAGCAATATC
ACCATATGTAGCCCAATGGTAAACGACACTCGAGCTGGCATGCATACGCG
TAACTAACCCCATGAGCAAGACGGAGACAAAACGGAAACGGGACGTTCAG
AGGAGGGCCAGGCCGGATCTCAGGCAGCCAACCAACTAGCCTCTGGTTCA
CAGGGATGGATGGGTGGAATGCAAGGCAACAAAACTGTTGTCAAAGAGGG
AAGGAGAAGACGGAGCAGAAGGGGGAGGGTGCAGAGGGGAAGGACATCAT
GCTGGACTGACGAGATAGGCCGAGATGATTGTTAACCAGCACGTGGTGTT
CCGAGTGTTGTCCCCGCCAAGCCCTCGGCTTCCTTAGTGCTCTATAAATA
TGAGGTTCATCTTGTTGTTCACTCGCAGTTAAATTCTGGTTCTCATTAAA
CGTGCGATTTGGCCAGCATCATGAAAGTAAGTAGCCTGTGCTGTGTTCCA
TGGGGGACTTGGGACCCGGGGCTTTATTTCTGCACATGGCTTGAGCGCTC
CTGGCTAAGCAACCACCCACTGATTGGAGGGAGTGAATGATGACCCTTTC
AATACTCTGGCTTCTTTAGTCCCAATGTTTTCCTTGGATTGTAGGTCTTC
GTTTCCGTTTTGTCCCTCTTGGCTTTGGCCACGGCTGACCGCATCAATCC
CTTCGACCGTCAGGGCCGTCAAGGAGGTGGCCAAGGATCCGGAGTCGACT
TCAGCAACTGTCAGAACGATCCTGAGACGGGTTTTTGCTGCGTGGAGAGC
GAAGAGATCGTCCAGACGCTGAAAAAAGACCCCATCCTCGAATGTACCCA
CAAGAATATTGAGAAATGCCACTACACCTATGTCACACAATTCGAGCCCG
CCCAAGAAGAGGTTTGCGAGGAGAACTTTGAGAAGTCCTGTCAGATCACC
TTCAAGCAGCAAGCTGTCGAGGAGCAGGTCAAGAAATGCTACCGTCCTCT
GGAGAAGGTCTGCAATGGCCAGGGACCCGAGGAGTGCCGCACCGTCTACG
AGTCCTCGTGCACCACCAAGTACATCGAGAAGCAGCCCGGCAAGTTCGTC
GGCGACACCAGCTGCGAGAAGCTCCCCATTGAGATCTGCGGTGCCGGTTG
CGTCACCGAGGAGGGACCCGAGGAGTGCCACGACAAAACCGTCACTTCCC
TCATCGATGTCCCCGAGGAGGTGTGCGACCTGAACCCCCAGAAGACTTGC
AAGTTCCAAACCAAGTTGGTGCCCAAGCTGAAGCCCGAGCACGAGTGTAC
CATCATCCCCCAGGAGATCTGCAACTTGAAGTTCACCTCGCCCCAACAAG
TGGACCAACCCTTGAAGACCAAGTGGTGTCTGGATCCCACTCCCGCTGCC
GCCGGTGAAACCTACGACGAGAACAGTGCCGGAGCTGCTCCTTTGGGCTA
G

Add to Basket

Search form