snap_masked-scaffold5636_size4459-processed-gene-0.2-mRNA-1, snap_masked-scaffold5636_size4459-processed-gene-0.2-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namesnap_masked-scaffold5636_size4459-processed-gene-0.2-mRNA-1
Unique Namesnap_masked-scaffold5636_size4459-processed-gene-0.2-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold5636_size4459supercontigscaffold5636_size4459:3157..4395 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
molecular chaperonesnap_masked-scaffold5636_size4459-processed-gene-0.2Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
snap_masked-scaffold5636_size4459-processed-gene-0.2-mRNA-1:exon:450snap_masked-scaffold5636_size4459-processed-gene-0.2-mRNA-1:exon:450Tigriopus kingsejongensisexon
snap_masked-scaffold5636_size4459-processed-gene-0.2-mRNA-1:cdssnap_masked-scaffold5636_size4459-processed-gene-0.2-mRNA-1:cdsTigriopus kingsejongensisexon
snap_masked-scaffold5636_size4459-processed-gene-0.2-mRNA-1:cdssnap_masked-scaffold5636_size4459-processed-gene-0.2-mRNA-1:cds-1954367Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1954366auto1954366Tigriopus kingsejongensispolypeptide
polypeptide-auto1954368auto1954368Tigriopus kingsejongensispolypeptide
Tk08289Tk08289Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk08289

>Tk08289 ID=Tk08289|Name=Tk08289|organism=Tigriopus kingsejongensis|type=polypeptide|length=412bp
MRIVNYLAEEFKKEHSVDLTQDKMALQRLKEAAEKAKIELSSSSQTEINQ
PFISMGKNGQPLHMVMKMTRAKLETLVGDLIKASMKPCAAALKDAGLKAS
DIDEVVLVGGMTRMPRVIEEVTKFFGKEPHKGVNPDEVVALGAAIQAGVL
QGDVKDVVLLDVTPLSLGIETLGGVFTRLIDRNTTIPTKKSQIFSTAEDN
QNAVTIRCFQGEREMAADNKILGAFNLESIPPAPRGMPQIEVTFDIDANG
IVSVGAMDKGTGKEQKITIQASGGLSDADIEKMVQDAADNADADKERRTL
IEAKNQAESLIHSTEKSVEEHSDKVDPTTVEAIELAIAALKDELETENAE
KIKSGIQNVTEAAMKLGEAIYKNAQDASEDDMAAAADHASNGGPDDDIVD
ADFEDLDNDKRA
back to top

mRNA from alignment at scaffold5636_size4459:3157..4395-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold5636_size4459-processed-gene-0.2-mRNA-1 ID=snap_masked-scaffold5636_size4459-processed-gene-0.2-mRNA-1|Name=snap_masked-scaffold5636_size4459-processed-gene-0.2-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=1239bp|location=Sequence derived from alignment at scaffold5636_size4459:3157..4395- (Tigriopus kingsejongensis)
ATGCGCATCGTCAACTACCTCGCGGAAGAGTTCAAGAAAGAGCACTCTGT CGATCTGACCCAAGACAAGATGGCCCTCCAGCGTCTGAAAGAAGCTGCCG AGAAAGCCAAGATCGAACTGTCGTCCTCTTCGCAGACTGAAATCAACCAG CCGTTTATCTCCATGGGTAAAAACGGCCAGCCGCTGCACATGGTTATGAA AATGACCCGCGCCAAGCTGGAAACACTGGTAGGTGACCTGATCAAAGCAT CGATGAAGCCTTGCGCCGCAGCGTTGAAAGACGCGGGCCTGAAAGCATCC GACATCGACGAAGTCGTCTTGGTTGGCGGTATGACCCGCATGCCACGCGT CATCGAAGAAGTGACCAAGTTCTTCGGCAAAGAGCCACACAAAGGTGTGA ACCCCGACGAAGTTGTGGCCCTTGGCGCTGCCATTCAGGCCGGTGTTCTT CAGGGTGACGTCAAAGACGTGGTTCTGCTGGACGTGACACCTCTGTCCTT GGGTATTGAAACCCTCGGCGGTGTTTTTACACGCCTGATCGACCGCAACA CAACCATCCCGACGAAGAAGTCGCAGATCTTCTCGACTGCGGAAGACAAC CAGAACGCTGTGACAATCCGCTGCTTCCAGGGCGAGCGTGAAATGGCTGC CGATAACAAAATCCTCGGTGCCTTCAACCTCGAGAGCATCCCGCCCGCAC CTCGCGGCATGCCCCAGATCGAAGTGACCTTCGACATTGACGCAAACGGC ATCGTATCCGTTGGCGCCATGGACAAAGGTACCGGCAAAGAACAGAAAAT CACCATTCAGGCTTCTGGTGGTCTGTCCGATGCCGACATCGAAAAAATGG TTCAGGACGCTGCTGACAACGCAGATGCGGACAAAGAACGCCGCACGTTG ATCGAAGCGAAAAACCAGGCCGAGAGCCTCATACACTCTACAGAGAAATC TGTGGAAGAGCACTCCGACAAGGTTGATCCGACAACTGTCGAAGCGATCG AACTGGCAATTGCCGCGCTGAAAGACGAACTGGAAACAGAGAACGCCGAA AAGATCAAATCCGGCATCCAGAACGTGACCGAAGCGGCAATGAAACTGGG CGAAGCCATCTACAAGAACGCTCAGGACGCCTCCGAAGACGACATGGCGG CAGCAGCTGATCATGCGTCTAACGGTGGTCCCGATGATGACATCGTCGAT GCCGATTTCGAAGACCTCGACAACGACAAGCGCGCGTAA
back to top
Add to Basket