snap_masked-scaffold59_size442576-processed-gene-0.17-mRNA-1, snap_masked-scaffold59_size442576-processed-gene-0.17-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namesnap_masked-scaffold59_size442576-processed-gene-0.17-mRNA-1
Unique Namesnap_masked-scaffold59_size442576-processed-gene-0.17-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold59_size442576supercontigscaffold59_size442576:86496..88151 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
nuclear receptor 1snap_masked-scaffold59_size442576-processed-gene-0.17Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
snap_masked-scaffold59_size442576-processed-gene-0.17-mRNA-1:exon:1513snap_masked-scaffold59_size442576-processed-gene-0.17-mRNA-1:exon:1513Tigriopus kingsejongensisexon
snap_masked-scaffold59_size442576-processed-gene-0.17-mRNA-1:cdssnap_masked-scaffold59_size442576-processed-gene-0.17-mRNA-1:cdsTigriopus kingsejongensisexon
snap_masked-scaffold59_size442576-processed-gene-0.17-mRNA-1:cdssnap_masked-scaffold59_size442576-processed-gene-0.17-mRNA-1:cds-1990735Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1990733auto1990733Tigriopus kingsejongensispolypeptide
polypeptide-auto1990736auto1990736Tigriopus kingsejongensispolypeptide
Tk11668Tk11668Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk11668

>Tk11668 ID=Tk11668|Name=Tk11668|organism=Tigriopus kingsejongensis|type=polypeptide|length=551bp
MSFEESGGASFPGTSSGDFALRDPEESLEGGEVVLEATEECQICKDPSIK
HLHYGAITCFSCKAFFRRTSQGNANEKFVCKNSGECNVLHKLRKKCRKCR
YEKCLQVGMKPSLVLTEEEKVKRFKKSLTKKAMEKHPKTERHPALMSMSG
DKDLSRAVSSSSSMSYYEDPHEGRPPVHPGLMGRDKTPLDHIWGMSQRNG
YPSYAKPAVTMADGIGNPYTRYKMVPKSIHLRSSYPGPSSIPVEAPPPGH
PGYEEDIWNLHEERGQPVSNLRMENLQSLALDVDPGLAITESEVLLLQKL
QHIHDSNYRSVAFGEDLIKSLVMSSAFGVPLSPSHTMMAYRLMIQRVTKV
AQGLDEFTELPVEDQTMLLKSNADLMVSLKGAGFFDNKNRGIDQILYTLG
IDDMDVAKRMVMTTSKTFGCMMNRIDYKSYNSLQDLTNQDMEQRYQWLLG
QVAEVTTLFPSLTKLMTFVVLFLPPEDGVLKDGVRVCRMQKWLLNLAHKL
VISQYSPEIGADLSMKITKICDYLKEITIIKRNRPLIAQVDENSPQPAGV
N
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mRNA from alignment at scaffold59_size442576:86496..88151-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold59_size442576-processed-gene-0.17-mRNA-1 ID=snap_masked-scaffold59_size442576-processed-gene-0.17-mRNA-1|Name=snap_masked-scaffold59_size442576-processed-gene-0.17-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=1656bp|location=Sequence derived from alignment at scaffold59_size442576:86496..88151- (Tigriopus kingsejongensis)
ATGTCATTTGAGGAGAGCGGTGGTGCCTCATTTCCAGGGACTTCCTCCGG
GGATTTCGCCTTGAGGGATCCGGAGGAGAGTTTGGAGGGCGGCGAAGTTG
TTTTGGAAGCCACGGAGGAATGTCAGATTTGCAAGGATCCATCCATTAAG
CACCTTCACTATGGAGCCATCACTTGCTTCTCGTGCAAGGCCTTCTTTCG
AAGGACCAGTCAGGGCAATGCCAATGAGAAATTTGTGTGCAAGAACAGTG
GTGAGTGCAATGTGCTCCACAAGCTGAGGAAGAAATGTCGCAAGTGTCGC
TACGAAAAGTGCTTGCAAGTGGGCATGAAGCCCTCCTTGGTCTTGACCGA
GGAGGAGAAAGTGAAGCGCTTCAAGAAGTCCTTGACCAAGAAGGCCATGG
AGAAGCATCCCAAAACCGAGAGGCACCCGGCCTTGATGTCCATGAGTGGT
GACAAGGATTTGAGCCGAGCCGTTTCGTCCAGTAGTTCAATGTCCTACTA
TGAGGACCCTCACGAGGGCCGGCCGCCCGTGCATCCGGGATTGATGGGGC
GGGACAAGACGCCTCTGGATCATATCTGGGGCATGTCCCAGCGGAACGGC
TATCCCTCGTATGCCAAGCCGGCCGTGACCATGGCCGACGGCATTGGCAA
CCCCTACACCCGTTATAAAATGGTCCCCAAGTCCATCCACTTGCGATCCT
CCTACCCGGGTCCCAGTTCCATTCCCGTGGAGGCTCCTCCGCCTGGACAC
CCGGGCTATGAGGAGGACATTTGGAACCTCCACGAAGAGCGAGGCCAGCC
CGTTAGCAATCTCAGGATGGAGAACCTTCAATCCCTGGCCCTCGACGTTG
ACCCTGGCCTGGCCATCACCGAGTCGGAGGTGCTCCTCCTCCAGAAGCTG
CAGCATATCCACGACAGTAATTACCGATCCGTGGCATTTGGCGAGGATCT
CATCAAAAGTCTGGTCATGTCATCGGCCTTTGGCGTCCCCCTCTCACCTT
CTCACACTATGATGGCCTATCGACTCATGATTCAGCGAGTCACGAAGGTG
GCCCAAGGCCTGGACGAGTTCACGGAGTTGCCCGTGGAAGACCAGACCAT
GCTCCTCAAGAGCAATGCCGACCTCATGGTGAGCTTGAAGGGGGCCGGCT
TCTTCGACAACAAAAATCGCGGGATCGATCAAATCCTGTACACCCTCGGG
ATTGATGACATGGACGTGGCCAAGCGGATGGTGATGACCACGTCCAAGAC
CTTCGGCTGCATGATGAACCGCATCGACTACAAAAGCTATAACTCCCTGC
AAGATCTGACCAACCAGGACATGGAGCAACGCTACCAATGGCTCCTGGGT
CAAGTGGCCGAGGTCACGACGCTCTTTCCATCCCTCACCAAACTCATGAC
CTTCGTGGTCCTCTTCCTACCTCCCGAGGATGGAGTGCTGAAAGATGGAG
TTCGGGTTTGTCGCATGCAGAAATGGCTGCTCAACTTGGCCCATAAGCTG
GTGATCAGCCAATATTCGCCGGAGATTGGAGCAGACCTTTCCATGAAAAT
CACCAAAATATGTGACTACCTCAAGGAGATAACTATAATCAAACGTAACC
GACCATTAATTGCCCAAGTCGACGAAAATTCTCCTCAACCGGCCGGAGTC
AACTGA
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