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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold5_size1054832 | supercontig | scaffold5_size1054832:4610..8870 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| maker | 2018-02-12 .496401 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| snap_masked-scaffold5_size1054832-processed-gene-0.1-mRNA-1:exon:205 | snap_masked-scaffold5_size1054832-processed-gene-0.1-mRNA-1:exon:205 | Tigriopus kingsejongensis | exon |
| snap_masked-scaffold5_size1054832-processed-gene-0.1-mRNA-1:exon:206 | snap_masked-scaffold5_size1054832-processed-gene-0.1-mRNA-1:exon:206 | Tigriopus kingsejongensis | exon |
| snap_masked-scaffold5_size1054832-processed-gene-0.1-mRNA-1:exon:207 | snap_masked-scaffold5_size1054832-processed-gene-0.1-mRNA-1:exon:207 | Tigriopus kingsejongensis | exon |
| snap_masked-scaffold5_size1054832-processed-gene-0.1-mRNA-1:five_prime_utr | snap_masked-scaffold5_size1054832-processed-gene-0.1-mRNA-1:five_prime_utr | Tigriopus kingsejongensis | exon |
| snap_masked-scaffold5_size1054832-processed-gene-0.1-mRNA-1:cds | snap_masked-scaffold5_size1054832-processed-gene-0.1-mRNA-1:cds | Tigriopus kingsejongensis | exon |
| snap_masked-scaffold5_size1054832-processed-gene-0.1-mRNA-1:cds | snap_masked-scaffold5_size1054832-processed-gene-0.1-mRNA-1:cds-1954776 | Tigriopus kingsejongensis | exon |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of Tk04014 >Tk04014 ID=Tk04014|Name=Tk04014|organism=Tigriopus kingsejongensis|type=polypeptide|length=1040bp
MDIPMSQKKKPTVGDFVRTGSCVGEPQANALHCLLNRELTVFTDVLNDTD
TENRSQSFPLPDDHWINQAFPEEDDKTLLMLALEKDLHDFTKVLLQTGAS
GRLYNHILGRAPVHVAALSGNLRSLQLLFSLKGNQPDINATMRSNGRTAL
HLCVEKKHGECVNFLLDQPGIDVNIKDKKNGQTALYMAVKASHLVITKAL
VEAGADYDYVCFGKTIFPELMADKLPGFHPNQVRRKNPPIVQQLSQGTFE
ALADILEKAANRKGEGPKLLEDFRSLLLQTDSFTLNNRVTNGSTLLQKAC
DLGLVSYVAEILNEEYEVNPDGVTEARAIPPILLAANRGHIGCIKELVQS
KVSLDLTNVRTDETILHCLLKGGRRNDEHFVQDLLDILGNEAIRSQIQKI
INQRDLLENTALHYATQMWPQTVVRSLLDLGANIGMTNHWNETPVTKILP
QTLEAYLDDCIEAEGDVNHEKFEVTYNYSFLAPPKEDLPFVSRQDLRPSP
SDPESQKLAEGETDERVALPETQTLWHMGQSKAHRHLLKHPVVTSFLYLK
WSRIRRYFNRNLRFYLLFVFILTWYIFERFGGKSLRDSEAQDIPALFILY
AAFALVLVAFILRDWAMDIKDLVRSEKVKSEDEEATSSVKFALIVMFSNW
VECLFVLFLGAVLWGGEPILWHALLFLTILLLIREFFQVSVSLKRYIVSP
ENWIEVSMIILIGFILFWNDTALDGLNRHFSAIVLVLSWAELITLVGKHP
KLTTYNVYVTMFYKVLGTFFFFLCWYVFFIIAFGLGFYIMLHKDGPNDDV
AGPDDYVFFNRPWTALVKTSTMFVGELEFSDIPINLDSRLGALSYAFFLS
FVFLIVVVLMNLLNGLAVSDTGLIQEKAEIVSYISRVETISYTESILLGD
PFNFLSQWPALKWLLNIPSCSLCAQLSKSRTMQRIFNKITGATGILLFYT
FLPTKKLTLQPNVRKSRCDCLRVELMDDDIIARTKEIVLQKATPNPEEDR
WQKLEGKLGLEIVGLNASVGARMANLEAKMDLLLSSLSKR back to topmRNA from alignment at scaffold5_size1054832:4610..8870+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >snap_masked-scaffold5_size1054832-processed-gene-0.1-mRNA-1 ID=snap_masked-scaffold5_size1054832-processed-gene-0.1-mRNA-1|Name=snap_masked-scaffold5_size1054832-processed-gene-0.1-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=4261bp|location=Sequence derived from alignment at scaffold5_size1054832:4610..8870+ (Tigriopus kingsejongensis)
AGAAAAGCGACGCTTCTCCGAGAGTGAGCTTGGGAGAGAGTATTTTTAAT
CAATAAGAAGTAAATGTCAGGACTATTGGAGACATAGAACCGAGTGGATC
CACTATGGACATTCCCATGTCCCAGAAGAAAAAGCCCACAGTGGGTGACT
TTGTGCGTACCGGAAGCTGTGTGGGCGAACCTCAGGTAAGGTTTTACACC
CATATTAGCAAAGCCATGTGATTCATGGACACCCGCTGCCAGGGCATGAT
ATCGCGCATGAATGAGATCATAATATTCCAACTACAATGATCCAAAGTTG
GTACCAATTGGGATCGCACACACAGCTGAATCACGAAAACATAGCTAGGA
TGGTGATGTCAGGTACCGGAATACTAGCATTTGGGATCCTTATAAGCAAA
GCACAATGCTCCTGCACTCTCTGATGTGCCTGGAGTAGTGTTCCTACGTG
AAACCTAAACTTGATGAATGAATAAAGAATGTAACGAGTTGACGTTGTAA
ATGTTCACCTCCGAGTGGATTTGAGTTCAGTTTTGCACATCCACTTTGCA
TTATGCGATCAAATTGGTGTCATGTTCTTTCGCTTTCGACACGCCCTGGT
GAATCCACATCAGGCGAGTCATAGCTCTGCTCATGTATTCCAATGATTTC
CAACCGTCCTGGTGTCCCTCCTAATTAGAATATTTTTTTTTCAAAATGAA
CTCATAATTCAGTGTGAACATTGTTAGAGACGGTGCAGCGCTTGAACGAA
ATGTGAATTTTCTTCGAAGCAGCAGGGGAGCCATCCAGATCTTCCTGAAT
TCGCCCATTTTTCAAAGCTTTAATAGAGTTCATCATCAATCGTATCGAGA
GCAACTAACTCTTTGACTCCTGCGCGTGGGTCATTCACGCTTGGCAACCT
TGATCGAACCTTTGAACGAAGGACAATATTTGCGCTATCATATGGTATAC
GTAATTTCATTAACATATCAGAAAAACTTGCATGTAGCTCATTTGAAGGG
TTTCTAAATTGTTTGTTCATTGCAATTCCAGGCTAATGCTCTTCATTGTC
TTCTGAACCGAGAATTGACCGTGTTCACTGACGTTCTGAATGATACCGAC
ACGGAGAATCGCAGCCAATCCTTTCCATTGCCTGATGATCACTGGATTAA
CCAGGCTTTTCCCGAGGAAGATGACAAGACCCTGCTCATGTTGGCTTTGG
AGAAGGATCTTCACGATTTTACCAAGGTATTGCTTCAAACTGGGGCCAGT
GGCCGACTTTACAACCACATCCTCGGCCGGGCTCCAGTTCATGTGGCAGC
TTTGAGTGGCAATTTGAGGTCGCTCCAACTCTTGTTCAGCCTCAAAGGCA
ACCAGCCCGACATCAATGCCACCATGAGGAGCAATGGGAGGACGGCACTC
CATCTGTGTGTGGAGAAGAAGCATGGGGAATGCGTCAACTTCCTCCTGGA
TCAGCCTGGCATTGACGTAAACATCAAGGACAAGAAAAACGGACAAACTG
CCTTGTACATGGCAGTCAAAGCTAGCCACTTGGTCATCACGAAGGCCTTG
GTCGAGGCGGGAGCCGACTATGATTACGTCTGCTTTGGCAAGACCATCTT
TCCGGAGTTGATGGCCGACAAATTGCCCGGATTCCATCCCAATCAAGTGA
GACGAAAGAATCCCCCCATCGTTCAGCAGTTGAGTCAAGGCACCTTTGAG
GCCTTGGCTGATATCCTGGAAAAGGCGGCCAACAGAAAGGGAGAAGGGCC
CAAATTACTGGAGGATTTCCGATCACTCCTGCTCCAAACCGACTCGTTTA
CCCTCAATAATCGAGTCACCAATGGGAGCACTCTGCTCCAAAAGGCGTGT
GACCTCGGTTTGGTCTCTTACGTAGCCGAGATCCTCAATGAAGAGTACGA
GGTCAACCCCGACGGGGTCACAGAGGCTAGAGCCATTCCTCCCATACTCC
TGGCCGCAAACCGCGGCCACATTGGATGTATCAAAGAATTGGTTCAATCA
AAGGTGAGCCTGGACCTCACTAACGTGAGGACAGATGAGACAATCCTCCA
CTGCCTTTTGAAAGGCGGAAGGCGGAACGATGAGCACTTCGTACAAGATC
TTTTGGACATTCTCGGGAACGAGGCGATCCGCTCCCAAATTCAGAAAATT
ATCAATCAAAGGGACCTTTTGGAGAATACGGCCTTGCACTACGCCACACA
GATGTGGCCTCAGACTGTGGTTCGGAGCCTGCTCGATCTTGGAGCCAACA
TTGGCATGACCAACCATTGGAACGAAACTCCCGTCACCAAAATCTTACCT
CAGACTTTGGAGGCCTACCTCGATGACTGCATCGAAGCCGAGGGTGACGT
TAACCACGAGAAATTCGAGGTGACCTACAACTACTCGTTCCTGGCCCCGC
CGAAGGAGGACCTCCCCTTCGTGAGCCGGCAAGACCTCCGTCCGTCTCCC
TCAGATCCGGAGAGCCAGAAACTGGCCGAAGGCGAGACCGATGAGCGGGT
AGCGTTGCCCGAAACCCAGACCCTCTGGCATATGGGCCAATCCAAGGCTC
ATCGACATCTCCTCAAACATCCAGTCGTGACCAGCTTCCTCTACTTGAAG
TGGAGTCGGATCCGGCGTTATTTCAACCGTAATCTTCGCTTCTATCTGTT
GTTCGTTTTTATCCTCACGTGGTACATCTTCGAGAGGTTTGGCGGGAAGA
GCCTCAGGGACAGCGAAGCCCAAGACATTCCGGCCCTCTTCATTCTTTAC
GCCGCCTTCGCTCTGGTTCTGGTGGCTTTCATTCTCAGAGACTGGGCGAT
GGATATCAAAGACCTCGTGCGGTCGGAGAAAGTCAAATCTGAGGACGAAG
AGGCTACGTCCTCAGTGAAATTTGCCCTCATCGTTATGTTCTCAAATTGG
GTGGAATGCCTCTTTGTCCTCTTTTTGGGCGCAGTCCTTTGGGGTGGCGA
GCCTATATTGTGGCACGCCCTTCTGTTTCTGACCATCCTCTTGTTGATCC
GCGAGTTCTTTCAAGTGAGCGTTTCCCTCAAACGGTATATCGTGAGTCCG
GAGAACTGGATCGAGGTTTCCATGATCATCTTGATTGGCTTTATCCTTTT
CTGGAATGACACAGCCCTGGACGGCCTCAACCGGCATTTCTCAGCCATCG
TCCTAGTACTCTCATGGGCCGAGCTCATCACCTTGGTGGGCAAACATCCC
AAGCTCACCACCTACAACGTCTATGTGACCATGTTCTACAAGGTTCTGGG
CACGTTCTTCTTCTTTCTGTGCTGGTACGTGTTCTTCATTATCGCTTTCG
GGTTGGGCTTCTACATCATGCTCCACAAGGATGGCCCCAATGACGACGTT
GCCGGTCCGGACGATTACGTCTTCTTTAACCGGCCTTGGACGGCCTTGGT
CAAGACCTCTACCATGTTCGTGGGAGAGCTGGAGTTTTCTGATATCCCCA
TCAATCTAGACAGCCGCTTGGGCGCTCTCAGCTACGCATTCTTCCTCAGC
TTCGTTTTCCTCATCGTGGTGGTGCTCATGAATCTCCTCAATGGTCTGGC
CGTCAGTGACACCGGACTCATTCAAGAGAAGGCCGAGATCGTGAGCTACA
TCTCGCGGGTGGAGACAATCTCGTACACCGAGTCCATCCTCCTGGGCGAT
CCCTTCAACTTTCTGAGCCAATGGCCAGCCCTGAAGTGGCTTCTGAACAT
ACCCAGCTGCTCACTTTGCGCCCAACTCTCGAAGTCCCGCACGATGCAAA
GGATCTTCAACAAGATCACGGGGGCAACGGGTATCCTCCTCTTCTACACG
TTTCTCCCCACCAAGAAGCTCACCCTACAGCCCAACGTCCGGAAGAGCCG
CTGTGATTGTCTACGGGTGAGTTTGAACAATGTTTTGAAAACTCCTTAAC
CGTGTCAGCTGCTCAGCTCCTTTAGAGCCTAGTGAGTTAATGAGAGGTTC
CGTTTCCGTCCCTCGGAGAATTTCCCTCAAATATCAACCCCATTTTCTTC
CTTCTCTCTTACAGGTTGAATTGATGGACGACGACATCATTGCCCGCACC
AAGGAGATTGTCTTGCAAAAGGCTACTCCCAATCCGGAAGAGGATCGATG
GCAAAAGCTGGAGGGAAAATTGGGGCTGGAAATTGTCGGCCTGAATGCCA
GTGTTGGGGCTCGTATGGCCAATTTGGAGGCCAAAATGGACCTCCTCCTC
TCGTCGCTGTCCAAACGTTAGATTAACAACTTGACTTCACGTAGGTCAAG
CTTGTTCGTGG back to top
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