snap_masked-scaffold613_size124221-processed-gene-0.1-mRNA-1, snap_masked-scaffold613_size124221-processed-gene-0.1-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namesnap_masked-scaffold613_size124221-processed-gene-0.1-mRNA-1
Unique Namesnap_masked-scaffold613_size124221-processed-gene-0.1-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold613_size124221supercontigscaffold613_size124221:17798..19879 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
abc transporter abcc1snap_masked-scaffold613_size124221-processed-gene-0.1Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
snap_masked-scaffold613_size124221-processed-gene-0.1-mRNA-1:exon:938snap_masked-scaffold613_size124221-processed-gene-0.1-mRNA-1:exon:938Tigriopus kingsejongensisexon
snap_masked-scaffold613_size124221-processed-gene-0.1-mRNA-1:cdssnap_masked-scaffold613_size124221-processed-gene-0.1-mRNA-1:cdsTigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1964970auto1964970Tigriopus kingsejongensispolypeptide
Tk11739Tk11739Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk11739

>Tk11739 ID=Tk11739|Name=Tk11739|organism=Tigriopus kingsejongensis|type=polypeptide|length=693bp
MDDPLSAVDPHVADHIFDRVISTKNGILQDKTRILVTNCVAILDRVDLIL
VMANGQISERGTYEELLAKEQDFARLIREYSQIGQVQSKEQPEDLAWDDE
THTKTDAGRLIHDEEAMVGRVRWSVYVDYMKIIGLFPSTIILALFVIAQS
LQVSGTAWMSHWADLNADSTNHEPYFYLGIFGAIGMCSTGIAFGRQYVLF
HACAKASRSLHHTLLYHIMRTPMAFFERTPIGRILNRFSADLDAADGKVP
QEITDFVWCLMEMMSILLIIACLLTWFIPVALVLFTIFYLIIVYYIQTSR
QLTRLESISKSPLLSHFSESLQGVSSLRVFRCQERFVDTCYNRLDENTTC
HYLNACCVLWLKQWTESLGSLVIFSSSLLVVLARGSLSAGLAGLILTYSF
ELLSTFSWMVQMACNLESNTVSLERIMEYNDVDQEDGWVKTPCAKPVLSD
PKVPAIEFQGYSTRYRPGLDLCLKSLDLKVHSGERLGVCGRTGAGKSSLT
KALFRILEPVDGRILLNGQDVSELGLHDLRNQITVIPQDPTLFTGTLRFN
LDPIGLHSDSELWLALERAHLGSYISALEQGLECTVQQNGGNFSVGQRQL
ICLARALLRNAQILILDEATAAVDLETDALIQKTIREDFHHCTVLTIAHR
LNTIVDSDRILVLEDGRVAEIDSPQKLQANPNSMFSSMITSLP
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mRNA from alignment at scaffold613_size124221:17798..19879+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold613_size124221-processed-gene-0.1-mRNA-1 ID=snap_masked-scaffold613_size124221-processed-gene-0.1-mRNA-1|Name=snap_masked-scaffold613_size124221-processed-gene-0.1-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=2082bp|location=Sequence derived from alignment at scaffold613_size124221:17798..19879+ (Tigriopus kingsejongensis)
ATGGACGATCCCCTCTCCGCTGTTGATCCTCATGTGGCTGATCACATCTT
TGACCGAGTCATCTCGACGAAGAATGGAATTCTCCAGGACAAAACCAGGA
TCCTGGTTACCAACTGCGTCGCCATCTTGGATCGGGTGGACTTAATCCTC
GTCATGGCCAATGGGCAGATCTCGGAAAGAGGGACTTATGAAGAGTTGCT
GGCAAAAGAGCAAGATTTTGCCCGACTCATCCGGGAGTACAGTCAAATCG
GGCAAGTCCAGTCCAAGGAGCAACCAGAAGATTTGGCATGGGATGACGAA
ACACACACCAAGACTGATGCTGGCCGACTTATTCATGACGAAGAGGCCAT
GGTGGGTCGAGTCCGATGGAGCGTCTATGTGGACTACATGAAAATCATCG
GACTCTTTCCGTCAACCATCATCTTGGCCTTGTTTGTGATTGCGCAATCG
TTGCAAGTGTCAGGGACGGCGTGGATGTCCCATTGGGCGGACTTGAATGC
CGACTCCACTAATCATGAGCCGTATTTCTACCTGGGCATATTCGGTGCAA
TTGGGATGTGCTCCACTGGGATTGCATTTGGAAGACAGTACGTCCTCTTT
CACGCCTGTGCTAAAGCATCACGATCTCTGCATCACACTTTGCTGTATCA
CATCATGCGAACGCCCATGGCCTTCTTTGAGAGGACGCCCATTGGGCGGA
TCTTGAATCGATTCTCAGCCGATCTTGATGCGGCGGATGGAAAAGTTCCC
CAAGAGATCACGGACTTCGTGTGGTGTCTCATGGAAATGATGTCCATCCT
CCTCATAATCGCCTGCCTCCTCACTTGGTTCATTCCGGTGGCCTTGGTCC
TATTCACAATCTTCTACCTCATCATTGTCTACTACATTCAGACCTCACGC
CAGCTTACACGCTTGGAATCTATTAGCAAATCCCCACTCCTGAGCCACTT
CTCCGAGTCTTTGCAAGGTGTCTCCAGCTTACGAGTCTTCCGCTGTCAAG
AGCGATTTGTAGACACATGCTATAATCGGTTGGATGAGAACACCACTTGC
CACTACCTGAATGCATGCTGTGTCTTATGGCTGAAACAATGGACAGAGAG
TTTGGGATCTCTGGTCATTTTCTCTAGCTCGCTCTTGGTTGTCCTCGCAC
GGGGCTCTTTGAGTGCAGGCTTGGCCGGATTGATCCTGACCTATTCATTT
GAGCTGCTCTCCACGTTCTCCTGGATGGTTCAGATGGCTTGCAATTTGGA
GTCCAACACTGTCTCCTTGGAGAGGATCATGGAATACAACGACGTGGACC
AAGAAGATGGTTGGGTCAAGACCCCTTGCGCCAAGCCTGTCCTTAGCGAC
CCAAAAGTGCCAGCAATCGAATTTCAGGGCTACAGCACCCGATACAGGCC
AGGGTTGGATCTCTGTCTGAAGAGTCTGGACCTGAAGGTTCACAGCGGAG
AGCGATTAGGAGTCTGTGGACGCACTGGAGCGGGCAAAAGCAGCCTCACC
AAGGCTCTTTTCCGAATCCTCGAGCCAGTTGACGGAAGGATCCTTCTGAA
CGGACAAGATGTGTCTGAACTTGGCCTCCACGACTTGAGGAACCAAATCA
CGGTTATTCCCCAGGATCCAACGCTCTTCACTGGTACCCTGCGCTTCAAC
CTCGATCCCATTGGCCTTCACTCGGACAGCGAACTCTGGCTGGCACTGGA
ACGTGCCCACTTGGGATCTTACATTTCGGCGCTGGAACAAGGCCTGGAGT
GTACTGTCCAACAAAATGGCGGAAATTTCTCCGTGGGTCAACGCCAACTG
ATCTGCTTGGCCAGAGCTCTCCTAAGGAACGCCCAGATTCTTATCCTGGA
CGAAGCCACAGCCGCAGTGGACCTGGAGACTGATGCACTCATTCAGAAGA
CCATTCGGGAGGATTTCCACCACTGCACGGTCTTGACTATCGCTCATCGC
TTGAACACAATCGTTGACTCGGACCGAATACTAGTTCTGGAAGATGGCAG
GGTGGCCGAGATTGACTCGCCCCAAAAACTTCAAGCCAATCCAAATTCGA
TGTTTTCATCCATGATTACGTCCTTGCCGTAG
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