snap_masked-scaffold638_size121162-processed-gene-0.4-mRNA-1, snap_masked-scaffold638_size121162-processed-gene-0.4-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namesnap_masked-scaffold638_size121162-processed-gene-0.4-mRNA-1
Unique Namesnap_masked-scaffold638_size121162-processed-gene-0.4-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold638_size121162supercontigscaffold638_size121162:47193..56126 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
wd repeat-containing protein 47snap_masked-scaffold638_size121162-processed-gene-0.4Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
snap_masked-scaffold638_size121162-processed-gene-0.4-mRNA-1:exon:214snap_masked-scaffold638_size121162-processed-gene-0.4-mRNA-1:exon:214Tigriopus kingsejongensisexon
snap_masked-scaffold638_size121162-processed-gene-0.4-mRNA-1:exon:215snap_masked-scaffold638_size121162-processed-gene-0.4-mRNA-1:exon:215Tigriopus kingsejongensisexon
snap_masked-scaffold638_size121162-processed-gene-0.4-mRNA-1:exon:216snap_masked-scaffold638_size121162-processed-gene-0.4-mRNA-1:exon:216Tigriopus kingsejongensisexon
snap_masked-scaffold638_size121162-processed-gene-0.4-mRNA-1:cdssnap_masked-scaffold638_size121162-processed-gene-0.4-mRNA-1:cdsTigriopus kingsejongensisexon
snap_masked-scaffold638_size121162-processed-gene-0.4-mRNA-1:cdssnap_masked-scaffold638_size121162-processed-gene-0.4-mRNA-1:cds-1978274Tigriopus kingsejongensisexon
snap_masked-scaffold638_size121162-processed-gene-0.4-mRNA-1:cdssnap_masked-scaffold638_size121162-processed-gene-0.4-mRNA-1:cds-1978275Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1978276auto1978276Tigriopus kingsejongensispolypeptide
Tk11616Tk11616Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk11616

>Tk11616 ID=Tk11616|Name=Tk11616|organism=Tigriopus kingsejongensis|type=polypeptide|length=799bp
MAMAAISPSGTHLTLKEEDVIKLASEFLQNRQLHISQVMLERESGVINGN
YSDDTLFLRQLILDGQWDDIMEFIQPLASLPSFNFKLFQFLILRAKFVEL
LCIKSEAPEVPHENAVNTVVDVLKEIEQVAPTKEHYSNLCLLLTMNKLSD
HLDYRAWNPTKGRINCFKEVLPLVAGLLGGEKDKQKRVMSEESGASTNDR
LLQLIIKGILYESCVDYCQQKATGAKQSNSIEFTTILSHSDFNDSDLSLL
SWLQSIPPDTFACPFEQKSLNVDVERIKAPSLETNWTEHMLVTPIKPNIF
PHSAMPNGRHKGADIMTKSLSVSIMNKSGENGVGDMTKSLAAFHLNSKKI
MESSVDHLFVREGEANGAKKISPESRGNPPPPPPPAPPKPPKQMIPEGLP
TTQIIMPQVREGRGMMGKKLLCTPPKFLPVNSLEDVQAIRCAEFHPSGHM
FAVGSNSKVLRLCQYPDMNNLRDTQEMGEITVLCKRPKHHKGSIYCLAWN
PTGELIATGSNDKTVKVVRFNNDTSALEPAASGEMELAMHDGTVRDCIFM
LDHPNILVSGGAGECKIHLTDCTTGQNIHSMVGHSGHVLSLCTWGGPIFA
SGSQDKTVRFWDLRTHGCVNVVQFHGGPGGPAQGSPVAACSVDPSGRLLV
TGHEDSMCCMYDIRGSRSIQAFKPHSQDIRSVRFSPNAYYLLSGGYDNRL
ILTDLQGDLSQPLPSVVVAQHQDKVISGRWHPTDFSFISTSNGQDGLWEH
TTDQARNIDQIIEGLELQIDALRRNWNEEDDVSLEQHGLKELDGGLAQT
back to top

mRNA from alignment at scaffold638_size121162:47193..56126+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold638_size121162-processed-gene-0.4-mRNA-1 ID=snap_masked-scaffold638_size121162-processed-gene-0.4-mRNA-1|Name=snap_masked-scaffold638_size121162-processed-gene-0.4-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=8934bp|location=Sequence derived from alignment at scaffold638_size121162:47193..56126+ (Tigriopus kingsejongensis)
ATGGCCATGGCGGCGATTAGTCCCTCCGGAACTCATCTCACTCTCAAAGA GGAGGATGTCATCAAATTAGCGAGTGAATTTCTCCAGAACCGGCAACTCC ACATCTCGCAAGTGATGCTTGAGCGCGAATCCGGCGTCATCAATGGCAAT TACTCCGATGATACCCTCTTTCTCAGGCAACTCATTCTGGATGGACAGTG GGATGATATCATGGAGTTCATTCAACCCCTGGCCTCGCTGCCCTCCTTCA ACTTCAAGCTGTTCCAATTCCTCATCCTCCGCGCCAAATTCGTGGAGCTC TTGTGCATCAAGAGCGAGGCTCCCGAGGTGCCTCACGAGAACGCCGTGAA CACAGTCGTGGACGTGCTCAAGGAGATCGAGCAAGTGGCACCCACGAAGG AGCACTACTCCAACCTATGCCTGCTTCTCACCATGAACAAGCTCTCAGAT CATCTCGACTACCGGGCCTGGAACCCGACCAAAGGTCGCATCAATTGCTT CAAGGAGGTCCTACCTCTCGTGGCTGGCCTTTTGGGCGGGGAGAAGGACA AACAGAAACGTGTGATGAGCGAGGAGTCCGGGGCGTCAACCAATGATCGC CTGCTCCAGCTCATCATCAAAGGCATCTTATACGAGTCATGTGTGGATTA TTGTCAGCAAAAGGCCACCGGAGCCAAACAGTCCAATTCGATCGAATTCA CCACCATTCTAAGTCATTCGGATTTCAACGATTCCGATTTGAGCCTCCTG TCATGGCTTCAGAGCATTCCCCCCGACACCTTTGCGTGTCCATTTGAACA AAAGAGCCTGAACGTGGATGTGGAGCGGATAAAGGCCCCCAGTCTGGAAA CTAATTGGACCGAACACATGCTCGTTACTCCAATCAAACCCAATATTTTC CCCCACTCCGCCATGCCCAATGGGCGGCATAAGGGAGCGGACATCATGAC CAAGTCACTCAGTGTGTCCATCATGAACAAGAGTGGGGAGAACGGGGTGG GAGACATGACCAAAAGTCTGGCTGCCTTTCATTTGAACAGCAAAAAGATA ATGGAGTCCTCGGTGGACCACCTCTTCGTCAGAGAGGGTGAGGCCAATGG CGCCAAGAAGATATCGCCCGAGTCGAGAGGCAATCCTCCGCCGCCTCCTC CTCCGGCTCCGCCCAAACCACCGAAGCAGATGATTCCCGAAGGGCTTCCA ACCACGCAAATCATCATGCCCCAAGTCAGAGAGGGGCGTGGCATGATGGG GAAGAAACTCTTATGCACTCCGCCCAAATTCTTGCCCGTGAACTCCTTGG AAGATGTTCAAGCCATTCGTTGTGCCGAGTTCCATCCTAGCGGACACATG TTCGCCGTGGGATCCAACTCCAAAGTGCTTCGTCTGTGCCAGTATCCGGA CATGAACAACTTGCGAGACACGCAAGAGATGGGCGAGATAACGGTGCTCT GTAAACGGCCCAAGCACCACAAGGGATCGATCTATTGCCTAGCTTGGAAC CCCACCGGTGAGCTCATCGCCACTGGCTCCAACGACAAGACGGTCAAGGT GGTCCGATTCAATAATGACACTTCGGCACTGGAACCGGCTGCCTCCGGCG AGATGGAGCTGGCCATGCACGATGGCACCGTCCGGGATTGCATCTTCATG CTCGACCATCCCAACATATTGGTGTCGGGGGGGGCCGGCGAATGCAAGAT CCACCTGACCGATTGCACGACGGGCCAGAACATCCACTCCATGGTGGGTC ACAGTGGCCATGTCCTCTCACTCTGCACGTGGGGTGGACCAATATTCGCC TCCGGATCCCAAGACAAAACCGTGCGCTTCTGGGATCTCCGCACTCACGG ATGTGTGAACGTGGTCCAATTCCACGGCGGTCCCGGCGGTCCTGCCCAGG GCTCCCCAGTGGCTGCCTGTTCCGTGGATCCATCAGGTCGACTCCTGGTC ACCGGACACGAGGATTCTATGTGCTGCATGTACGATATCCGAGGATCCCG CTCGATCCAGGCTTTCAAGCCGCATTCTCAAGATATTCGCTCTGTCCGCT TCTCGCCCAATGCCTATTACTTACTCAGTGGTGGCTACGACAACCGTCTG ATCCTCACCGACCTCCAAGGAGACCTCAGTCAGCCTCTCCCAAGTGTGGT GGTGGCGCAACACCAGGACAAAGTGATATCCGGACGCTGGCATCCCACGG ATTTCTCGTTCATTAGCACAAGTGCAGATAAGACATGCACATTATGGGGC CTGCCTCCCATCTAGACGCACTCGGGGAATAAGGAGCTGGATATCCGAAT GGACTCCCTATTGGAATCCTCTTAACCATTTTGTGATATCTGCTTTAGAG AGGGATCCCCAGGGAGAGAAGAGGCACTGCGTCCGACCCAAAAGCTTGAA TGTAATCTTGAACGATATGACGTTACCCACAAGCCAGGCCTTTCCTTGGA CTGTGTACGGGCCTTGGCCAGACCTGGACAACCCCAAACCCTTCAAGGAA CAATTAGATAAATATAATCATCCGAAACGCAATTCCAAGCAACTCGTGAA CGAGTTGTTTCATTGCCTTCCAAGTACTACTGAACCGCTAACCAGCCCCC CAAAAGTATCGTTCCTGGACAGTCATGATAATCTCTCGTTAATTGTCAAA TACATACACTAGTTTTGTTTCGCACTGATTATATTTTATCAACATGGGCA TGACACATTTTTTACGATATGAGTTTGGTAGCAGTGAAAGGGTGACTAGA CATTCTTTAGAAAGCAAGGGGTTTGAAGTGACAACTGGATTTGAAATTCG AGGAGACTCGCACGTCAGTCTCTTGCGCACTGAGTGTCTTTTACATAAGC CGAAACGGATGTTATGAAAACATTGCACAATTAAAGTTCATTCGAGCCGA GGCATTCTTCGAGTAATGTTATGTCTTTGATGTCATCACGATACAAAACC ATCTTTGCTGTCACAGCCATTCGAGGAATTTTTTGCCCCTATTTGCGGAA AGGCACTCGAGAGCTTAGACCGAACCTGAACAACATCCAAGTCAGAGGAA GCAAGCCACAGCAGTGGGAGGGGGATAGAAATGGCGGATGTGCAGGTTGA AAGCAATTTTAAGCGCCCACTCGGGGAAGGGCTAGGCCAATTGACGCGTG TTCCAGCCTAGGAACACGATTAAGGATACCAGCACCACGAGGACCCGAGA ACCAGGGTCCAAAGCACATAGGGATCCCTCAACAGTACTAATCCCGAATT GAACGCACTGTTTTCTGGAGCTGGAAAGAAAATTGGGATTTAGTGAGATT ACACAGTTCGTCCCCAAGGTCAGCACTCTGGGACCCATGAGCCTAATCGA AAATCATCGACTCCAGCATTCTCGTCAGCCAATTGATCCCAAGGATCGCT GCCAGTCTGGAATACACATTTCGCTCCTAGCCTGACCCAACAGCCCATGA GTGGTCCACGAAAATGCCCTGCCCATCCACTCGGCTTAGAGCCTGTCCAT AAGCTTCAAACATGGCTTTAATACCCCTGCCCAATATTGGTTGCTTCTTA GCCGGGGATAGAGCAAAGTTTCTGGGGCTCATCCACCTTGTTTCAAAGTT TCCCAATCACAACGAACGTACTAATACCTCGGTGAGTTTCTTGGATGTCT TCCTTGACAACTGTCAGATTGCCCGCTGGATTATCCGCGTCAAAGTCCTC ATCGTCGTCGTCATCGGTGACCTCCTCAATCTCGGACCGTGGGGCCAAGA ATATCATCTCTTCCGACATGGAGAAGTTGGTTTGGGGCAGGGAAATCTGG CAGATGAACGTGGTCTCGACCTCGGCGGATATCTGACTCGCGTTCAGCTC GACCTTAAGCAATCCGTCGAAATACATGGAGTTGTTGGGGTTCTCATAAA TAATGGTCTCCTCGAAGCTTTTAAAGGTGGTCCCACTATAGCAGAGAAGA GATTATGTTACAATCTCAAGAGTATAACTCGACAACTTAGTTAGATGACT ATTCCCACCGGGAACTCAGGCCCCACTCGCGATAGAGAGTCTCGAGCAAC TCTTGGGTGAGAAGGCAAAAGAAACACACGCACATAAATGCTCTGGTATT CAGTTACATTGAACAGGAAACGAGGTTAAAGGGGAAAATCAATGCCAAAG TAGAGCAATAATACCTTCCTTCCCAGGTAATGGACAAGATGGGCTCTGGG AACACACCACTGACCAAGCACGTAATATTGACCAGATCATCGAAGGCCTC GAGCTCCAGATCGATGCTCTCAGGCGGAACTGGAACGAGGAAGACGATGT CAGCTTGGAACAACATGGTAACCAACCAGGCCAGGCTATGGATCCACGAG TACTTTGATGGTAATGTGTGCCAGGGGTGATGGTATATTTAGTGCATACC CTTGTACAATGACCAGTTCCTGTTACTAGGATCTGAATGACAGTGTTGTT GGCGATTGTTCACATCTCAATTCTTATTATGGGAACTGTTCCCCCACATT TGGGAACAACACCCCTAATCCAATCAATGCAGGAACCATACTTCTAACAT ATTAGGCGACGCTCTCCTGGGTTCAAATATTTACTGTTCCGTGAAAATGG AACCTTTCATCTTGGCGAGCAGAATTTGGATTCTTTCATCAAAGGGAAAC ATTCGTTCACATCCTTTTAACGGTTGGAAAACCGATACGAGCGGAACATG TTTTGGGGCTTAAACGTTTGCATCTATGGCTTTTCATTTTCCTCTTACTC TAAACAGCGCAGTCGTAAGTTAGTAGTTGTCGAATAGCGTTGAGCATCGT CACTGCAATCCCTTTCTAGCCTTGTACCACACATGATGGCATTCGGAGTC ATGATGCACAAAAAAGCGATCTTGCCATGTCCTGAGACGACCACGTCGAG TGCTCATTATGATTCCAAAGTGACAAAAAGCTTTTCTCCATTACCACAGT GAATACGCGTCAGGATTCACGTCCTGGCACTTAGCCGGGATGTAGATCAG TCGACATGAGGTGTTTATTGCTCAATGGAACCATCAATCACGTTGGTGGA GGCTAATTTTATTCATTAGAGACCGTGGATCATTCCACAGATGCCTAGTG TATTCCGACTGATAGCACGTTTGGGCTGAGGGAAGGGTTCTTTTCCTCTC AAGACGGATGGTGGCCATTCCACACCGCCTGAGATTCTCTTAATTCGCTT TCGAGATGGCGGAGATTGTTTTGAGATATCCTCGCTCTTACAGATCCCTT GAGAGGAACTTTCTCTCCTCCCCAAAGTCTATGAATGAGGGAGATGAAAA GTCGACCGTAGACTTGATTAATTTCGACAAGGGCTTTACTGTACACACAC AAGTGCCCAAGTATATGTCAATTACGGTCTACTTCAGACATGATTACCGC ACCTTATGACATTCTCGTCGGAGGCATGTTCTTAGGGGCTTGATCTGCCC CTGACACGTCTGACAGGAGCGTGTGGTATTCACAGAATTGGACAAGGCCA TCATACCCATCCGTTTGGGCTTTCCCCATCGGGCAATGGGTAGGGTCAGT GGATTATGTATCCCGAGATCTTACCAAATACCAAGAGTTGCTTTTGCTTG AAGTCCTCGTCGATGAGCGTGGACACCTTGCAGCGGTAGGAGCCGGACAG TTGGGGTCCGGGATTGATGATCTTGAGGGCGCGATACTGCTTGGCCTCGT CCTCGTGGGACACAAAGTCCAAGTCGATGTGATCGGCGAAACGATCCCCA ATCAATTGGGGCTTCCGCCCCTGACCCGGAATCCATTGGAAGAATGGAAT GTGCTCCTCGTTGAAGTACCACTTGATGTCCAGTTGGCTTCGCTCCTCTT CGCTGAAGTCGTAGTCGCAGTCGAGCACGATCTCGCTCTCGTTGCCCGAC TCTGCAGTCTCTGGCATGATCAAGTCGATGATTTCCACTCCCTGACTCAC ATCTGCATGGGAAAGAAAAAGAATTCTCAACCATCGGAAGCAACGGCTAT TTTTGGGAATGGGAGAAAAGTTTCACGAACCAACGGCGAACTTTCTTTCG CATGCTACAGATTAGTTCGCTCTTAAATGCCAAGCATTCCAGTGTCTCTT TTCGTGGCAGCCAAGCAAGCTCGACCCCACATTGAGACTTATACCTTCCA TGGTATTGCCATTCACTGAAGGGTCTGAGATGCTTAGAAGGGATTCTGAG GGGTCGCAGGGAGACTTGTTCACCTCATGCGTGAATTAGTCCCCTTTTTC CAGCTAAACGTAATTTGCTTGACTGCCATACGTCAACCCCCATATTACCC TAGACTGCTGAGCTGATTCCCGATTGGAGATATTTCCTGAGAACACCAAG CTGGCCCTGGTTGTGAAGGTTTTCAGGGTTGTCTTGAGTGGAGGTGCAAA CATATGTTTTGCTTCATAATCGATATGCATAGCTAGGACCATACGACACT TAAATCTCGGGTCTTATATGTGAATATTTAACACAGTCCATCCCTGAATG GTTACTTGCCCGAGCCTGAGTTCCCGTAAGAATCAAGTGTGTTTTCCCTG TGTGTTTGTATCTCTTAGTTGTGTCCATATATTGTACTTATGCACATACA ACCTGTATGTGAATAAGGCTCAAAGGCTGACGACTAAAACAGGCTGCCAA TCTTGAAACCACACTTTTAACAACATTACGGTACAGTCATTCTGAGTTCA TTCTCCGCACCCTGTACCGTAGTCTCAAGTCTGTACTTAAGGACCTGATC TCAAAACAACCCTGAGTAGAAATTTTCATTGAGGCTTGCTTTGAGGCATT CCAGTGATCATTTTCTCTCAAGCTCCATAGTTAAGGATACTTCTGAATCC TTGAGCAATTATGCCCTATTCTAAGCATGAGCCTTATGAGAGTGGCCAAT GTTGGACAAGTATGTTAGTGAGCCTTTGATGAGGATCCTGTCAAAGGGAC CTCGTAGCCGGGGGGAGAAAATGACGTCCACATGATCAGTCCACAACTTC TCTCAGGTGCACCTGGATGCTTCAAATGGAGCGGACATTCCAGGATCTTT GTCCGTGTGAAGTAAGTGGTGGGGATGAAGGAGAAAATGATGTACGTTCG CTGCAATTTCGAGCTGGATACAGTTACAGACCTGCGAGTGTTGGGATCTT GATGTTACGAACTGCAAGAAGGCTCACATGTCGCTGTCAAGCGACCACGA GACCTGATATTACATTTGAGATCATTTACTCTGATTATATTCTCTCCGAC CTGATTACAAGCGCAGAAATAATGGATGGTCTGAGAGCCAACGAATCCCA AATGATCTCTATCCTGTGGACAGACACACGACAGATTGGAGCAATGTGAT TCAAAGTCAATTTCACGTTGCACCCCCACAGGTGGACAAACTGTAGAATG CGTTACTCTTGGTATGTGCTCTTTTGAACATCTGCAATCCTCACATGTAC AGGTTGGCCATTGTCCAAGAGTAACTTTAATTCACAAGTAAACAGCTCTT TGCACAAATAGTGTGCTCTGGAGTGTTTCTATAATAAACAAGAACTTTCA GGACCGAACACACAGGTATATGCTCATTTTTGGATAAGAATTTTTTTTTC AAAACTTTAGTATCTTATTTTGAAAAATGTGGTATACTAAAGTATCTTAT CTGCTCAAAGGGTGTGGGTACATTGACCCTTGTTGGCAAACAACCTATCG TGTGTCGCAGTAAGTAAACAGTAATCCGGGGACCAATGGGTTAAGTTGTC TTCCATTCTCATACATATTCACCAAGAAAAATGTGCTTGGAAATGTGCGA ATGGATAAAAGTTTGGATTCCTTTGCTCCCTTGCCTCCAAAACGTAACTT TTCTCCCTGACTAGGATTCCGCTTGTGAGATTTATTGTCTGGCTCGGGAG CAAACTAATTGGGAATTGTCTCGTAATTCTTGAGGTATGACCAAAGGTAA CCTGGTCCACCCTCAACTTGCTCTCCTTACAAAATCTGCAATGTCTAACT TAGTAGACTGAATAATTCAGACTGGAGTGAAATACAAACTCAAGAGATCC CAGGACACGTGGATAGTTTGGCAGTTTACTGTATCTGTGTATCAGCTTTG TTTTTTTGGAAATCCAAGAGGCTCTCTATGGTAGTAAGGTTATCCATGAG TCCATGCATGGGTTATCATAGACAGACTAATATCATTAGGGTTGTTTAGG CCTTAGGTGGTGATGACTAATTTGTTTTTGACTAGATGCAAGTGGTAAAT ATAGTAGGATCACGAACATCTGTCACAAGACAAAGAGCACGATACATATC AAGGCCCTTTTGCCAAACTCCTGAACTCGACATACAGTACTATAAAAATC ATCTCTCGGCCGATTTGAGTCATTCACGATTAGTTTGGGCCGAAACCGAA ATTTTCCTGGCCCAAATAGAGAGTCGCTTGGTTAGAAAAATGCTTCCTTG TACCACAAGAAATTTACCTTACAAAAATACATATAAATTCAAAAGTGCTC GAATGTGTCGCCGTCAATTGTAGCTATTAATTGTGTAGCAAAGTTACTTC AGTTGCAGCGTGAAACGGAGTTTGGTCCATTTTCTTTAAATGGGATTCAA ATAGCTCTCACTTTAGAAGAGCCTATTGAAAGTTGTTGTACTCGATGAAT TATCTCAATGGTTAGGCCCCAAAGGTATGAATGGTGAACACATTTAATGC TTAACACTCAAAATTGGTAATGGTATTTGCTTTGTGAATTGTCAACCCAA CCAGCTTAACCAGAAACACAATGGTCTCCAACTTGATCTGATGCGTCAAA ATGGTTGGCGATACTAGCTTGACCCTGTGTGTGGTATTAATCTACCCACA CTGCAGTTCGGCTGAATCCCTTTTCCCATCTACTCGCCCTCATCAGGCTT GAAAGAACTCGATGGAGGATTAGCCCAGACCTGA
back to top
Add to Basket