snap_masked-scaffold7064_size3409-processed-gene-0.0-mRNA-1, snap_masked-scaffold7064_size3409-processed-gene-0.0-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namesnap_masked-scaffold7064_size3409-processed-gene-0.0-mRNA-1
Unique Namesnap_masked-scaffold7064_size3409-processed-gene-0.0-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold7064_size3409supercontigscaffold7064_size3409:75..626 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
short-chain dehydrogenasesnap_masked-scaffold7064_size3409-processed-gene-0.0Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
snap_masked-scaffold7064_size3409-processed-gene-0.0-mRNA-1:exon:819snap_masked-scaffold7064_size3409-processed-gene-0.0-mRNA-1:exon:819Tigriopus kingsejongensisexon
snap_masked-scaffold7064_size3409-processed-gene-0.0-mRNA-1:cdssnap_masked-scaffold7064_size3409-processed-gene-0.0-mRNA-1:cdsTigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1949066auto1949066Tigriopus kingsejongensispolypeptide
Tk05159Tk05159Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk05159

>Tk05159 ID=Tk05159|Name=Tk05159|organism=Tigriopus kingsejongensis|type=polypeptide|length=183bp
MGPLRVLINSAGLGMAARTVDRNNDPMPQKTFDFVIKVNLLGSFNMLRLC
AAAMAKTDPIDDDGARGAIVNMASAAAFDGQIGQAAYSASKGGIVGMTLP
IARDLSAMGIRVNTIAPGLIDTPIYGEGEQSDAFKAHLGQSVLFPKRLGH
GEELAFMAIDTVTNPYMNGETIRVDGGIRMPPK
back to top

mRNA from alignment at scaffold7064_size3409:75..626+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold7064_size3409-processed-gene-0.0-mRNA-1 ID=snap_masked-scaffold7064_size3409-processed-gene-0.0-mRNA-1|Name=snap_masked-scaffold7064_size3409-processed-gene-0.0-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=552bp|location=Sequence derived from alignment at scaffold7064_size3409:75..626+ (Tigriopus kingsejongensis)
ATGGGCCCGCTCCGCGTGCTCATCAACTCGGCCGGCCTCGGCATGGCGGC
TCGCACCGTCGACCGCAACAACGACCCGATGCCGCAGAAGACGTTCGACT
TCGTCATCAAGGTCAACCTGCTCGGCTCGTTCAACATGCTGCGCCTCTGC
GCCGCCGCCATGGCCAAGACCGACCCCATCGACGATGACGGCGCACGCGG
CGCCATCGTCAACATGGCATCGGCAGCAGCCTTCGACGGCCAGATCGGCC
AGGCCGCCTACTCGGCGTCCAAGGGCGGCATCGTCGGCATGACCCTGCCG
ATCGCTCGTGACCTTTCGGCCATGGGCATCCGAGTCAACACCATCGCACC
GGGACTCATCGACACGCCGATCTACGGCGAAGGCGAGCAGTCCGATGCGT
TCAAGGCCCACCTCGGCCAGTCCGTCCTCTTCCCCAAGCGCCTCGGCCAT
GGTGAAGAGTTGGCGTTCATGGCGATCGACACGGTCACCAACCCGTACAT
GAATGGCGAGACCATTCGTGTCGACGGCGGCATCCGGATGCCGCCCAAGT
AA
back to top
Add to Basket