snap_masked-scaffold712_size108441-processed-gene-0.9-mRNA-1, snap_masked-scaffold712_size108441-processed-gene-0.9-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namesnap_masked-scaffold712_size108441-processed-gene-0.9-mRNA-1
Unique Namesnap_masked-scaffold712_size108441-processed-gene-0.9-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold712_size108441supercontigscaffold712_size108441:58464..61181 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
hypothetical protein BRAFLDRAFT_212201snap_masked-scaffold712_size108441-processed-gene-0.9Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
snap_masked-scaffold712_size108441-processed-gene-0.9-mRNA-1:exon:847snap_masked-scaffold712_size108441-processed-gene-0.9-mRNA-1:exon:847Tigriopus kingsejongensisexon
snap_masked-scaffold712_size108441-processed-gene-0.9-mRNA-1:exon:848snap_masked-scaffold712_size108441-processed-gene-0.9-mRNA-1:exon:848Tigriopus kingsejongensisexon
snap_masked-scaffold712_size108441-processed-gene-0.9-mRNA-1:exon:849snap_masked-scaffold712_size108441-processed-gene-0.9-mRNA-1:exon:849Tigriopus kingsejongensisexon
snap_masked-scaffold712_size108441-processed-gene-0.9-mRNA-1:exon:850snap_masked-scaffold712_size108441-processed-gene-0.9-mRNA-1:exon:850Tigriopus kingsejongensisexon
snap_masked-scaffold712_size108441-processed-gene-0.9-mRNA-1:exon:851snap_masked-scaffold712_size108441-processed-gene-0.9-mRNA-1:exon:851Tigriopus kingsejongensisexon
snap_masked-scaffold712_size108441-processed-gene-0.9-mRNA-1:exon:852snap_masked-scaffold712_size108441-processed-gene-0.9-mRNA-1:exon:852Tigriopus kingsejongensisexon
snap_masked-scaffold712_size108441-processed-gene-0.9-mRNA-1:exon:853snap_masked-scaffold712_size108441-processed-gene-0.9-mRNA-1:exon:853Tigriopus kingsejongensisexon
snap_masked-scaffold712_size108441-processed-gene-0.9-mRNA-1:five_prime_utrsnap_masked-scaffold712_size108441-processed-gene-0.9-mRNA-1:five_prime_utrTigriopus kingsejongensisexon
snap_masked-scaffold712_size108441-processed-gene-0.9-mRNA-1:cdssnap_masked-scaffold712_size108441-processed-gene-0.9-mRNA-1:cdsTigriopus kingsejongensisexon
snap_masked-scaffold712_size108441-processed-gene-0.9-mRNA-1:cdssnap_masked-scaffold712_size108441-processed-gene-0.9-mRNA-1:cds-1981695Tigriopus kingsejongensisexon
snap_masked-scaffold712_size108441-processed-gene-0.9-mRNA-1:cdssnap_masked-scaffold712_size108441-processed-gene-0.9-mRNA-1:cds-1981696Tigriopus kingsejongensisexon
snap_masked-scaffold712_size108441-processed-gene-0.9-mRNA-1:cdssnap_masked-scaffold712_size108441-processed-gene-0.9-mRNA-1:cds-1981697Tigriopus kingsejongensisexon
snap_masked-scaffold712_size108441-processed-gene-0.9-mRNA-1:cdssnap_masked-scaffold712_size108441-processed-gene-0.9-mRNA-1:cds-1981698Tigriopus kingsejongensisexon
snap_masked-scaffold712_size108441-processed-gene-0.9-mRNA-1:cdssnap_masked-scaffold712_size108441-processed-gene-0.9-mRNA-1:cds-1981699Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1981700auto1981700Tigriopus kingsejongensispolypeptide
Tk06085Tk06085Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk06085

>Tk06085 ID=Tk06085|Name=Tk06085|organism=Tigriopus kingsejongensis|type=polypeptide|length=406bp
MNGKSFLQKFRTHWHTLPSLHRRFLGTSINRDKQVVQFEFTDGTKDDFPF
VWLRDSCQSSKSFDASSFSRLTNLRDFAMDIQPVSCEHNSKGKFTITWED
GHVSPFSEEFLRNHSFQNEARASRRMRDQVELELWSDDFHQNFPRADFRR
VMTCRKSFLAWLQDLSKFGFVLLQNVPLEEGHIKQIAERVAFEKLTHYGS
GYTVIVRDTPSNIAYTPHTIGFHTDLTYYKYTPGVVLLHCIKQHEGRGGE
TQLADGFKAAHLLKARNPQAYDLLANTTLNFRDNGTDYIKFNKLNITRIL
SHDLTGRLERLNWSNFARHTELDLPLDDVRPFYDAMREYEDILHSNECHL
KHKMKPGDMITVKNTRIVHGRTALEGKLTGRHLQCGYIDLDEVDSRIRVL
QSEISD
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mRNA from alignment at scaffold712_size108441:58464..61181+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold712_size108441-processed-gene-0.9-mRNA-1 ID=snap_masked-scaffold712_size108441-processed-gene-0.9-mRNA-1|Name=snap_masked-scaffold712_size108441-processed-gene-0.9-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=2718bp|location=Sequence derived from alignment at scaffold712_size108441:58464..61181+ (Tigriopus kingsejongensis)
AGTCATCGCCTCGCATCATGAACGGAAAGAGTTTCCTCCAAAAATTCCGA
ACCCACTGGCACACGTTGCCTTCGCTTCATCGCCGATTCTTGGGTGAGTT
TCCCCTGGCCAGGATAGATATTTGGACTTAACCGACTCGATTCTACCAAT
ATCGTAGGGACAAGTATCAACCGTGACAAGCAAGTGGTCCAATTCGAATT
CACCGATGGAACCAAAGATGATTTTCCGTTTGTTTGGCTTCGGGACAGCT
GTCAGAGCTCGAAAAGCTTCGATGCGAGCTCGTTTTCTCGGCTCACCAAC
CTGAGAGACTTCGCCATGGACATCCAACCAGTCTCTTGTGAAGTGAGTAC
AATCCCAAATGGGCTTTTAAAAGCACGTGCGAAAGCGATTCCCAAGCCGA
GGTCAAAATACGTCAAAGTCAGACAGTTGCACCTACGTACATCTAAGAGG
TTAACAGGCCACGTACGGATCCGTCTGAGGCCACACCTGCTGGGACAGCA
CTCGATCCACATAATCCAATAATGGGGGTCACTCATGAAATTAGTCAACA
AAATGAGCCAGTGCCATTGGATCAACACGACAGTCGACAGGTTTCGTGTT
GAAAAACATAACAAACAGCCCTCAAATATTGCTCGCCCCAAATCTTGGCA
TCCAGTTCCCTGATAACATGTATTCCTCAGTGGGCCACTAATGACCATTC
CTTGGCTCCCCAAAATAGCACAACTCCAAGGGCAAATTTACCATCACTTG
GGAAGATGGTCATGTGAGTCCATTCTCTGAGGAGTTCCTGAGGAATCATT
CGTTCCAGAACGAAGCTCGAGCCAGTCGCAGGATGAGGGACCAAGTGGAG
CTCGAGCTTTGGAGCGACGATTTCCATCAAAACTTCCCTCGAGCCGACTT
CAGGTGGGACGTGGCCCATGTGTCGACTCGTTCCGGCCAGTAATGAAATT
GTCCTCCCGATTCCAGGAGGGTGATGACTTGCCGAAAGTCCTTCTTGGCC
TGGCTCCAAGATCTGTCAAAGTTTGGCTTTGTACTTCTTCAAAATGTTCC
ACTCGAGGAAGGTCACATCAAACAAATTGCCGAGCGTGTGGCCTTTGAAA
AACTCACACACTACGGGTAAATGCATTTATCAAGATTCCCAACGACCCAC
GAGTCGGAGCCCAGCACTGGGGTCAATTTCCTGCGTGGCACGTCAGAGCA
TTTGGCACCTAATCCAATCAACCGAACCCAGACATATTCTCGCATCTAGT
GCAATGTTCCACTTTCAGCTCTGGCTACACCGTGATTGTGCGAGACACGC
CCAGCAATATCGCCTACACGCCTCATACAATTGGATTTCACACGGATTTG
ACCTATTACAAATACACGCCTGGGGTAAGACCACACAGTCATTGCTCATT
TTTCTGCTGACGAAGTTTGAAGGGCATTTGCATTCATTCATCATAAACTA
ACGTTCGAGAAAGAGTCTCATGGCGAACACTATAAAGAATTGTATTAATG
GAGCCACGTCCGTCTTCGCTTCATCTTATCTCCCTTGAGGCCTGTTCAGA
TGATCTTCGGACTGCGACTGAAATTTACACGCATGGGTGTACTTTCAGGT
GGTTCTTTTACATTGTATTAAGCAGCACGAGGGTCGAGGAGGCGAGACGC
AATTAGCGGATGGATTTAAAGCGGCTCACCTATTAAAAGCGCGAAATCCA
CAGGCGTATGACCTTTTGGCGAACACGACATTGAACTTCCGCGACAATGG
CACCGATTACATCAAATTCAACAAGCTGAACATCACTCGTATTCTCAGGT
GAGTCATCTGTCGAAGTCTGACTGTTTTCACAACTTCACAAGTGAGCATC
GATGTGCTCAGCCAGGGTGACATGCATACACATTGTGCTTACAGTATCAA
CGAAAGAGTCAACCGGAATCGGGCCTCGAATAGCTAGCGCCAAATGAGAA
AATCCCACCAAGATATCCCTACGTTCAATCCAAAATAGAGACAGCCTCTA
CTGGTTGCTGCAGTTGAAATTTTCTTCTACATGTACACGTATAGGATTGG
CCTAGCCCTGGTCCAGTCCGTCGTTAGTATTGCTTGAATGTCACCCTGGC
TCGTTGAGCACACATCGGTGATATTCTTGTTCTCGGTCGGGAAACTTGAC
CAGGCGAAAATCGCCGTTTTATGGGTCAAGGACATCATGGATCTTATGCT
GACTTGTGACAGCCATCAAGGTCCACAGATCAAGGATGAGAATGTGTGCT
TCCCTTCCAACATGAACCTGGAATAGCCATGAAGGAAATAGAATCCCCTT
GGAAGTAGCTCAGAGAGTCTCAACTACCGTTTCCTTTCATCTTCAGCCAC
GATCTTACCGGTCGTTTGGAACGCTTAAATTGGAGCAATTTTGCCCGACA
CACCGAATTGGATCTACCTCTGGACGATGTTCGCCCATTCTATGATGCCA
TGCGAGAATACGAGGATATCCTACATTCTAATGAGTGCCACCTCAAGCAC
AAGATGAAACCAGGCGATATGATAACCGTGAAAAATACCCGAATTGTCCA
CGGAAGAACGGCTCTGGAGGGGAAACTAACCGGGCGACATCTCCAATGTG
GATACATCGATCTGGACGAGGTGGACTCGAGGATTAGAGTCCTGCAGAGC
GAGATATCTGATTGAAACAAATTGTTGCATCAAGGATGTCATCACGATAT
GGCGTGTGTCATCATTCC
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