snap_masked-scaffold7580_size3107-processed-gene-0.2-mRNA-1, snap_masked-scaffold7580_size3107-processed-gene-0.2-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namesnap_masked-scaffold7580_size3107-processed-gene-0.2-mRNA-1
Unique Namesnap_masked-scaffold7580_size3107-processed-gene-0.2-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold7580_size3107supercontigscaffold7580_size3107:2157..2921 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
3-hydroxy-2-methylbutyryl- dehydrogenasesnap_masked-scaffold7580_size3107-processed-gene-0.2Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
snap_masked-scaffold7580_size3107-processed-gene-0.2-mRNA-1:exon:1snap_masked-scaffold7580_size3107-processed-gene-0.2-mRNA-1:exon:1Tigriopus kingsejongensisexon
snap_masked-scaffold7580_size3107-processed-gene-0.2-mRNA-1:cdssnap_masked-scaffold7580_size3107-processed-gene-0.2-mRNA-1:cdsTigriopus kingsejongensisexon
snap_masked-scaffold7580_size3107-processed-gene-0.2-mRNA-1:cdssnap_masked-scaffold7580_size3107-processed-gene-0.2-mRNA-1:cds-1952801Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1952799auto1952799Tigriopus kingsejongensispolypeptide
polypeptide-auto1952802auto1952802Tigriopus kingsejongensispolypeptide
Tk08058Tk08058Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk08058

>Tk08058 ID=Tk08058|Name=Tk08058|organism=Tigriopus kingsejongensis|type=polypeptide|length=254bp
MDLNNNIAAITGGASGLGAATAEYFASKGCKVALFDLDQERGEKHAAAIG
GLFVKVDVTDEASVNAGLDAVEAWAGGTARILVNCAGIAIGCKTVGKHGP
HPLADFEKVIKINLVGSFNCSRLAAARMCDAEPMRCGDRGVIISTASVAA
FDGQIGQVAYGASKAAVAGMTLPIARDLSGNAVRVCTIAPGIFMTPMMAG
MPENVQQALGESVPYPKRLGEPSEYAKLAAHIVDNQYLNGETIRIDGAIR
MPPR
back to top

mRNA from alignment at scaffold7580_size3107:2157..2921+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold7580_size3107-processed-gene-0.2-mRNA-1 ID=snap_masked-scaffold7580_size3107-processed-gene-0.2-mRNA-1|Name=snap_masked-scaffold7580_size3107-processed-gene-0.2-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=765bp|location=Sequence derived from alignment at scaffold7580_size3107:2157..2921+ (Tigriopus kingsejongensis)
ATGGACTTGAACAACAACATCGCTGCCATTACCGGCGGCGCCAGCGGGCT
CGGTGCCGCAACCGCAGAGTACTTCGCCAGCAAAGGCTGCAAAGTCGCAC
TGTTTGATCTCGATCAAGAGCGCGGAGAAAAGCACGCAGCAGCCATCGGC
GGCCTGTTTGTCAAAGTGGATGTCACAGACGAAGCCAGCGTCAACGCAGG
TCTAGACGCTGTTGAAGCTTGGGCTGGTGGCACAGCGCGTATTTTGGTCA
ATTGCGCAGGCATTGCGATTGGCTGCAAAACGGTTGGCAAGCACGGCCCT
CACCCATTGGCCGATTTCGAGAAGGTTATCAAAATCAATTTGGTTGGTAG
TTTTAACTGTTCGCGCTTAGCAGCCGCCCGCATGTGCGATGCCGAACCCA
TGCGCTGCGGTGATCGCGGTGTGATAATCAGCACCGCAAGCGTTGCGGCC
TTTGATGGGCAGATTGGACAAGTGGCTTATGGCGCCTCAAAAGCAGCCGT
CGCCGGTATGACCTTACCCATTGCCCGTGATTTATCCGGCAACGCCGTGC
GTGTTTGCACCATAGCGCCAGGTATTTTTATGACGCCGATGATGGCGGGC
ATGCCAGAGAATGTGCAGCAGGCCCTCGGCGAGTCCGTGCCTTACCCCAA
ACGCTTGGGCGAGCCCTCAGAGTATGCCAAGCTGGCGGCCCATATTGTCG
ACAACCAGTATCTCAATGGCGAAACTATCCGTATCGACGGCGCTATTCGC
ATGCCGCCTCGCTAG
back to top
Add to Basket