snap_masked-scaffold808_size94304-processed-gene-0.6-mRNA-1, snap_masked-scaffold808_size94304-processed-gene-0.6-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namesnap_masked-scaffold808_size94304-processed-gene-0.6-mRNA-1
Unique Namesnap_masked-scaffold808_size94304-processed-gene-0.6-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold808_size94304supercontigscaffold808_size94304:2312..4602 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Prohibitin-2snap_masked-scaffold808_size94304-processed-gene-0.6Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
snap_masked-scaffold808_size94304-processed-gene-0.6-mRNA-1:exon:874snap_masked-scaffold808_size94304-processed-gene-0.6-mRNA-1:exon:874Tigriopus kingsejongensisexon
snap_masked-scaffold808_size94304-processed-gene-0.6-mRNA-1:exon:875snap_masked-scaffold808_size94304-processed-gene-0.6-mRNA-1:exon:875Tigriopus kingsejongensisexon
snap_masked-scaffold808_size94304-processed-gene-0.6-mRNA-1:exon:876snap_masked-scaffold808_size94304-processed-gene-0.6-mRNA-1:exon:876Tigriopus kingsejongensisexon
snap_masked-scaffold808_size94304-processed-gene-0.6-mRNA-1:exon:877snap_masked-scaffold808_size94304-processed-gene-0.6-mRNA-1:exon:877Tigriopus kingsejongensisexon
snap_masked-scaffold808_size94304-processed-gene-0.6-mRNA-1:exon:878snap_masked-scaffold808_size94304-processed-gene-0.6-mRNA-1:exon:878Tigriopus kingsejongensisexon
snap_masked-scaffold808_size94304-processed-gene-0.6-mRNA-1:three_prime_utrsnap_masked-scaffold808_size94304-processed-gene-0.6-mRNA-1:three_prime_utrTigriopus kingsejongensisexon
snap_masked-scaffold808_size94304-processed-gene-0.6-mRNA-1:cdssnap_masked-scaffold808_size94304-processed-gene-0.6-mRNA-1:cdsTigriopus kingsejongensisexon
snap_masked-scaffold808_size94304-processed-gene-0.6-mRNA-1:cdssnap_masked-scaffold808_size94304-processed-gene-0.6-mRNA-1:cds-1952136Tigriopus kingsejongensisexon
snap_masked-scaffold808_size94304-processed-gene-0.6-mRNA-1:cdssnap_masked-scaffold808_size94304-processed-gene-0.6-mRNA-1:cds-1952137Tigriopus kingsejongensisexon
snap_masked-scaffold808_size94304-processed-gene-0.6-mRNA-1:five_prime_utrsnap_masked-scaffold808_size94304-processed-gene-0.6-mRNA-1:five_prime_utrTigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1952139auto1952139Tigriopus kingsejongensispolypeptide
Tk09780Tk09780Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk09780

>Tk09780 ID=Tk09780|Name=Tk09780|organism=Tigriopus kingsejongensis|type=polypeptide|length=242bp
LGGIQDDIYSEGLHFRMPWFQYPIIYDIRSRPRKISSPTGSKDLQMVNIS
LRVLSRPDMLFIPTMHRELGLDFDEKVLPSICNEVLKGVVAKFNASQLIT
QRQQVSMLIRKQLVDRARDFNIILDDVAITELSFGREYAAAVEAKQVAQQ
EAQRAAFIVDRAIQEKQQKIVQAEGEAAAAEMLGEAISRNPGYLKLRKLR
ASAQIAKTVSQSQNRVYLNAGTLMLNINEDDYDKGIKSLNKK
back to top

mRNA from alignment at scaffold808_size94304:2312..4602-

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold808_size94304-processed-gene-0.6-mRNA-1 ID=snap_masked-scaffold808_size94304-processed-gene-0.6-mRNA-1|Name=snap_masked-scaffold808_size94304-processed-gene-0.6-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=2291bp|location=Sequence derived from alignment at scaffold808_size94304:2312..4602- (Tigriopus kingsejongensis)
ACTCGAGCGTAGTTGACATTCTGTTAGGGTGAGGTCAGGTCGGGGCAGAT
GAGGTCAGGTTGGATGTTAGCACTGTTTGGGCGCACGACCGCCAGCCCTT
ACCTTTACCCTAGGGGGTGGGGCGCTCATGGCCGGCCTCTGAGAGGTGAG
CAGTTTGGTCGAGTCCCAAGCGCCTCAGCCGGTGGGCTAGTGGTGGCCCG
GAGTCCCGATTCCTCCATGGACTCTGGTCCGGCGGCCAGGCCGGGCTACC
AGACCCTACCAGGGAGTCAAGTCAGGGCCGCCCTGATCCGGCCCGATCGT
TGATCTGGAAGCCCGACTGGCCCATCCCTCTTCCCGATGGACATATCTGA
GCCTCATTGCCTAGCGTGGGCCGCCACGTGTTCCAAGGCTAGGCGGGTCA
TGCGTTTCATGCTGGGCTTTGGTTTCTCTAGTCGAGGGTGGTCATCGGGC
CATCATCTTCAGTCGGCTGGGCGGCATCCAGGACGACATCTATAGTGAGG
GGCTGCACTTCCGCATGCCCTGGTTCCAATATCCGATCATCTACGACATT
CGCTCGCGGCCCCGCAAAATCTCCTCGCCCACCGGCTCCAAGGATCTGCA
GATGGTCAACATCTCGCTCCGCGTGCTCTCCCGACCGGACATGCTCTTCA
TCCCGACCATGCACCGCGAATTGGGTCTGGACTTTGACGAGAAAGTCTTG
CCGTCCATTTGCAATGAGGTGAGTGCGCAGGGGCCAGCCACGCGAGCTTT
GGCCCGTGCCAGCCCAGGTGTAGGGGGCACGCCACCCGATTGCCCCCTTA
CCTTCTGGGGTCTCGGATGATTGGGATTCTGATCTCGGCCGGCGCCTAGC
TCTGATCCATCGACCGTCCGGCTCACATACAGTACATGGGACGGCCTGCC
TCGACCTAGCCATACCCCATTAACATGACTACTAACTACTCTAGTTCAGG
TCTGTTGCACTTTTTCCCCCGGGCCAGGCCCTCTAGGGTGCCCATGATCC
CGTCATGCAACCCAATTTGACAGTTGTGACTGGTGCGGGTTCCGGGCCCC
CAATTGGGCTGCACTGGTTAAAAACAACCACTCGATGAGCCTCTGTCCCT
GCCCACGTGACTAAATACCCTCAATGAATCCCCCCTGGGGTCCCACGCTG
GCTGCTCATTCGTCCACCAACCATTGGACTCGACTTCTGGGCCATTGGGC
CCCATCAAAATCATGGCGTAATTGTTTATAGTGGCCCTCGCTGGTAATCC
GCCTACTCCGGGTACTGGACCCAGCTGGACGATCTCTCTCACCCCCTGTT
TGAGGCCAAGCGTTGAAACCCTCGCCCAACCAAGGTGAAGTGTCCGAAAT
ATCCCTTCCACCCCGGAACTCCCCGTCAACTCTAATCCAACTATCCCCTT
TTGGGAGAGCCATCGATCCATTAACCGTATTCAGCCTTCATTTGACGATT
TTGGGGTTATGCTGCCTATAGGTCTTGAAGGGCGTGGTGGCCAAGTTCAA
TGCCTCCCAGCTGATCACTCAGCGCCAGCAAGTGTCCATGTTGATCCGCA
AGCAATTGGTGGATCGAGCCCGCGATTTCAACATCATCCTGGATGACGTG
GCCATCACCGAGTTGAGCTTTGGCCGAGAATATGCCGCCGCCGTCGAGGC
CAAACAGGTGATTACAGACTTATCCTTGAATTGTTTTGGAATTGCGGGAT
GATTCTCATTCAACCATAATCACTAGTGGTAGTAGATGGTGTTAATTTGG
CTCTGGCTCGGTTCTAGGTTGCCCAACAAGAGGCTCAGAGAGCAGCTTTC
ATTGTGGACCGGGCCATTCAGGAGAAGCAGCAGAAGATTGTTCAGGCTGA
GGGAGAAGCCGCAGCTGCGGAGATGTTGGGAGAGGCCATTTCCAGGAATC
CTGGCTACTTGAAACTGAGGAAATTGAGAGCCTCGGCCCAGATTGCCAAG
ACGGTGAGAGTCCTCTCCGTGTGTCGCTTATTGGCCATTTCGATTCAAAC
GGTTTTTTGGGTGTGCTTTCAGGTGTCCCAGTCCCAGAATCGTGTGTATC
TGAATGCCGGAACTCTGATGCTGAACATCAACGAGGATGACTATGACAAG
GGAATCAAGAGCTTGAACAAGAAATAAGATGGGCTGAATCTTAGTGGACA
GACGTTTATTTTACACTACTCGTCTCATTGGATCGCCATTGGTTTATTTG
CGATCGATGTAGGCCAAGGAACATTTTGTCATTTTGTGCCCGCCCTTTAT
TCATCCAGAGAGCAGAAATGAACAGAGGATCTATGAGCTAG
back to top
Add to Basket