snap_masked-scaffold810_size94089-processed-gene-0.1-mRNA-1, snap_masked-scaffold810_size94089-processed-gene-0.1-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namesnap_masked-scaffold810_size94089-processed-gene-0.1-mRNA-1
Unique Namesnap_masked-scaffold810_size94089-processed-gene-0.1-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold810_size94089supercontigscaffold810_size94089:4309..6345 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
low quality protein: tyrosine-protein phosphatase non-receptor type 9-likesnap_masked-scaffold810_size94089-processed-gene-0.1Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
snap_masked-scaffold810_size94089-processed-gene-0.1-mRNA-1:exon:29snap_masked-scaffold810_size94089-processed-gene-0.1-mRNA-1:exon:29Tigriopus kingsejongensisexon
snap_masked-scaffold810_size94089-processed-gene-0.1-mRNA-1:cdssnap_masked-scaffold810_size94089-processed-gene-0.1-mRNA-1:cdsTigriopus kingsejongensisexon
snap_masked-scaffold810_size94089-processed-gene-0.1-mRNA-1:cdssnap_masked-scaffold810_size94089-processed-gene-0.1-mRNA-1:cds-1956372Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1956370auto1956370Tigriopus kingsejongensispolypeptide
polypeptide-auto1956373auto1956373Tigriopus kingsejongensispolypeptide
Tk05701Tk05701Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk05701

>Tk05701 ID=Tk05701|Name=Tk05701|organism=Tigriopus kingsejongensis|type=polypeptide|length=678bp
MTDTEDTPPVSPRHHAQPVTAEEEAQVQSFIAAVNEWRSSRGFEPLSWSS
AVKFLMARKFHVERALVLYQQHELMRLREDLARVEPAESPLREELLTEKF
TILPAKDANGATLALFNAHKHDPHVTNHRTTLQGVVYQLDVALEDLVTQR
GGLVFIYNMSGSKYANFDYDLSQKILTLLKGAYPARLKKVLIVTAPLWFK
APFKVLRLFVREKLRDRVFTVSLPQLQMHVPLGAIPQPMGGQLAHDHAHW
LVRCLAVTRSRDGQLVTMSSSQPSTPQDQRKQQPTLEQLESMPLTLQAQG
VSTVLNISNSATSSNGLTKLIIPPPAPPPEDEDALKTVPNGHPQSVMVSS
TCSSGGLSDDDEEDQRVAEGLTLPEFIEHVRLKGRRGLYEEYSEIKNRPP
NGTFHHARAFENHDKNRYTDVLCYDHSRVILESGDCDYINANFVDGYQQP
RAFISSQGPLPKTFPDFWRMIWEQRVIVIVMTTKTSERNRTKCGQYWPED
VGGSLVAAPFQIHSEEIENFEDFYVTHLTLHSFETGETRKVCHFQFISWP
DYGVPDSALSMLHFLERIREKQADMLVNELGEAWDGHPLGPPIVVHCSAG
IGRTGTFATLDMAIRKFEDIQKVDIRTTVEQIRAQRAFSIQMPDQYVFCH
LAFLEYVLHREYVEEIDLTGFNDDCDSE
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mRNA from alignment at scaffold810_size94089:4309..6345+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold810_size94089-processed-gene-0.1-mRNA-1 ID=snap_masked-scaffold810_size94089-processed-gene-0.1-mRNA-1|Name=snap_masked-scaffold810_size94089-processed-gene-0.1-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=2037bp|location=Sequence derived from alignment at scaffold810_size94089:4309..6345+ (Tigriopus kingsejongensis)
ATGACGGACACGGAGGACACGCCCCCCGTCTCCCCGCGGCACCACGCCCA
GCCGGTGACGGCCGAAGAGGAGGCCCAAGTCCAGTCCTTCATCGCGGCCG
TCAATGAGTGGCGCTCCTCCCGGGGCTTCGAGCCGCTGTCCTGGTCGTCG
GCCGTCAAGTTCCTCATGGCCCGCAAGTTCCACGTGGAACGCGCCCTGGT
CCTCTATCAGCAGCACGAGCTCATGCGCCTCCGCGAAGACCTGGCCCGGG
TGGAGCCGGCCGAGTCGCCGTTGCGCGAGGAGCTCCTCACGGAAAAGTTC
ACGATCCTGCCGGCCAAGGATGCCAATGGGGCCACGCTGGCCCTGTTCAA
CGCCCACAAGCACGACCCTCACGTGACCAACCACCGGACCACGCTGCAGG
GCGTGGTCTACCAGTTGGACGTGGCCCTGGAGGATCTGGTCACGCAGCGC
GGCGGACTTGTCTTCATCTACAACATGTCGGGCTCTAAGTACGCCAATTT
TGACTACGATCTGAGTCAAAAGATTCTCACCCTCCTCAAGGGCGCCTATC
CGGCCCGACTGAAAAAGGTGCTAATCGTGACCGCGCCCCTGTGGTTTAAG
GCCCCCTTCAAGGTGCTGCGCCTTTTTGTACGGGAGAAGCTCCGGGACCG
CGTGTTCACTGTCAGTCTGCCCCAGCTTCAAATGCACGTCCCACTCGGGG
CCATTCCCCAGCCTATGGGGGGCCAGCTGGCCCACGACCACGCCCACTGG
CTTGTCCGCTGTCTGGCCGTCACCCGCAGCCGCGACGGTCAGCTCGTCAC
CATGAGTAGCAGTCAGCCCTCCACGCCTCAGGACCAGCGCAAACAGCAAC
CCACGCTCGAGCAGCTCGAGTCCATGCCCCTCACCTTGCAGGCGCAAGGG
GTGTCCACGGTCCTCAACATCTCCAACTCGGCCACCTCGTCCAACGGGTT
GACCAAGTTGATCATACCGCCGCCCGCTCCCCCGCCCGAGGACGAGGATG
CGCTCAAGACGGTGCCCAACGGTCATCCCCAATCCGTCATGGTCAGTTCC
ACCTGCAGTTCCGGCGGTCTCTCCGACGACGATGAGGAGGACCAGCGGGT
GGCCGAGGGGCTCACCTTGCCCGAGTTCATTGAGCACGTCCGCCTCAAGG
GTCGGCGGGGCCTCTACGAGGAGTACAGTGAGATCAAAAATCGCCCGCCC
AATGGAACCTTTCACCACGCTCGCGCCTTCGAGAACCACGACAAGAACCG
CTACACGGACGTGTTGTGCTACGACCACAGCCGGGTCATCCTCGAGAGCG
GGGATTGTGATTATATCAACGCCAACTTTGTGGACGGCTATCAGCAGCCG
CGAGCCTTCATTTCCTCCCAGGGCCCCCTGCCCAAGACTTTCCCGGACTT
TTGGCGCATGATCTGGGAGCAGAGAGTGATAGTGATTGTCATGACCACCA
AGACTTCGGAGCGCAACCGAACCAAGTGTGGGCAGTACTGGCCCGAGGAC
GTGGGCGGTAGCCTCGTGGCCGCCCCATTCCAGATCCACTCGGAAGAGAT
CGAAAACTTCGAGGACTTCTACGTCACCCACCTCACTCTCCATAGCTTCG
AGACGGGGGAGACGCGCAAGGTGTGCCACTTCCAGTTCATATCCTGGCCC
GATTACGGTGTCCCGGATTCGGCCCTCTCAATGTTGCATTTCCTCGAGAG
GATCCGCGAGAAGCAGGCGGACATGCTGGTGAACGAATTGGGTGAGGCTT
GGGATGGCCATCCCTTGGGTCCGCCCATTGTGGTCCACTGCTCCGCCGGC
ATTGGACGTACGGGCACGTTCGCCACCCTGGACATGGCCATCCGCAAGTT
CGAGGACATTCAAAAGGTAGACATACGCACCACGGTGGAACAGATCCGCG
CACAAAGGGCGTTCTCCATTCAGATGCCGGATCAGTACGTGTTTTGCCAT
CTCGCCTTCCTGGAGTACGTGCTCCACCGGGAGTACGTGGAGGAAATCGA
CTTGACGGGCTTCAACGACGACTGCGACTCGGAGTAA
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