snap_masked-scaffold8278_size2790-processed-gene-0.0-mRNA-1, snap_masked-scaffold8278_size2790-processed-gene-0.0-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namesnap_masked-scaffold8278_size2790-processed-gene-0.0-mRNA-1
Unique Namesnap_masked-scaffold8278_size2790-processed-gene-0.0-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold8278_size2790supercontigscaffold8278_size2790:683..1882 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
malate-- ligase subunit betasnap_masked-scaffold8278_size2790-processed-gene-0.0Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
snap_masked-scaffold8278_size2790-processed-gene-0.0-mRNA-1:exon:906snap_masked-scaffold8278_size2790-processed-gene-0.0-mRNA-1:exon:906Tigriopus kingsejongensisexon
snap_masked-scaffold8278_size2790-processed-gene-0.0-mRNA-1:cdssnap_masked-scaffold8278_size2790-processed-gene-0.0-mRNA-1:cdsTigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1951194auto1951194Tigriopus kingsejongensispolypeptide
Tk07728Tk07728Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk07728

>Tk07728 ID=Tk07728|Name=Tk07728|organism=Tigriopus kingsejongensis|type=polypeptide|length=399bp
MNIHEYQAKQLLKQFGAPVAAGEPILSKDDVEAAIAALPGPLYVVKSQIH
AGGRGKGKFKELPADAKGGVRLAFSPDEVRSHVEEMFGNTLVTAQTGPAG
KQVNRLYLEDGADIASELYLSILVNRETGKVSFVASTEGGMDIEAVAHDT
PEKIHTVDVDVETGVDAAIAAKLVAAFELTGTAAAEAPELFELLYKAFVE
KDMALLEVNPLIVMENGSLRVLDAKMSFDGNALFRHDDVVALRDTSEEDA
KEIEASKHDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGEEPANFLDVG
GGATTEKVTAAFKIITADPNVKGILVNIFGGITRCDVIAEGVVQAVKDVG
LQVPLVVRLEGTKVAEGKAIIDNSDVDVVSADDLDDAAQKIVAAIKGGV
back to top

mRNA from alignment at scaffold8278_size2790:683..1882+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold8278_size2790-processed-gene-0.0-mRNA-1 ID=snap_masked-scaffold8278_size2790-processed-gene-0.0-mRNA-1|Name=snap_masked-scaffold8278_size2790-processed-gene-0.0-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=1200bp|location=Sequence derived from alignment at scaffold8278_size2790:683..1882+ (Tigriopus kingsejongensis)
ATGAACATACATGAGTACCAGGCAAAGCAGCTGCTGAAGCAGTTCGGGGC
CCCCGTGGCCGCCGGTGAGCCAATCCTGAGCAAAGACGATGTTGAAGCTG
CAATAGCAGCATTACCCGGCCCACTTTACGTGGTGAAGAGCCAGATCCAC
GCAGGTGGTCGCGGCAAAGGTAAATTCAAAGAGCTGCCCGCAGACGCCAA
AGGCGGCGTGCGTTTGGCCTTCTCTCCTGACGAAGTGCGCTCGCACGTCG
AAGAGATGTTCGGCAACACACTCGTCACAGCGCAAACCGGTCCCGCTGGC
AAGCAAGTCAATCGCTTGTATCTAGAAGACGGTGCCGACATCGCATCTGA
GCTCTACCTGTCGATTCTCGTCAATCGTGAGACTGGCAAAGTATCTTTTG
TTGCCTCTACTGAAGGCGGCATGGATATCGAAGCGGTTGCTCACGATACG
CCCGAAAAAATCCACACGGTCGACGTCGATGTCGAGACGGGTGTTGACGC
TGCAATCGCTGCCAAGTTGGTCGCTGCATTTGAGTTGACTGGCACAGCCG
CTGCTGAAGCCCCAGAATTGTTCGAGCTGCTCTACAAAGCATTTGTCGAA
AAAGACATGGCGCTGCTCGAAGTGAACCCACTGATCGTGATGGAAAACGG
CTCGCTACGCGTGCTGGACGCCAAAATGTCTTTCGACGGCAACGCGCTTT
TCCGCCACGACGACGTGGTTGCATTGCGTGACACCTCAGAAGAAGACGCC
AAAGAAATCGAAGCGTCTAAACATGATCTGGCTTACGTCGCACTCGACGG
CAACATTGGCTGCATGGTGAACGGCGCTGGCTTGGCGATGGCCACGATGG
ACATCATCAAGTTGTACGGCGAAGAGCCTGCCAACTTCCTCGACGTGGGC
GGCGGTGCCACCACAGAGAAAGTCACGGCTGCTTTCAAAATCATCACAGC
CGACCCGAACGTCAAAGGCATTCTGGTCAACATCTTTGGTGGCATCACGC
GTTGTGATGTTATCGCAGAGGGTGTGGTTCAGGCGGTTAAGGACGTGGGC
CTGCAAGTGCCACTGGTTGTTCGCCTAGAAGGTACCAAGGTAGCTGAGGG
TAAAGCGATCATCGACAACAGCGACGTTGACGTTGTTTCCGCTGACGACT
TGGACGACGCCGCCCAGAAAATTGTTGCCGCCATCAAGGGAGGTGTCTAA
back to top
Add to Basket