snap_masked-scaffold899_size83673-processed-gene-0.9-mRNA-1, snap_masked-scaffold899_size83673-processed-gene-0.9-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namesnap_masked-scaffold899_size83673-processed-gene-0.9-mRNA-1
Unique Namesnap_masked-scaffold899_size83673-processed-gene-0.9-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold899_size83673supercontigscaffold899_size83673:79021..82054 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
e3 ubiquitin-protein ligase rnf8-b-likesnap_masked-scaffold899_size83673-processed-gene-0.9Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
snap_masked-scaffold899_size83673-processed-gene-0.9-mRNA-1:exon:110snap_masked-scaffold899_size83673-processed-gene-0.9-mRNA-1:exon:110Tigriopus kingsejongensisexon
snap_masked-scaffold899_size83673-processed-gene-0.9-mRNA-1:exon:111snap_masked-scaffold899_size83673-processed-gene-0.9-mRNA-1:exon:111Tigriopus kingsejongensisexon
snap_masked-scaffold899_size83673-processed-gene-0.9-mRNA-1:exon:112snap_masked-scaffold899_size83673-processed-gene-0.9-mRNA-1:exon:112Tigriopus kingsejongensisexon
snap_masked-scaffold899_size83673-processed-gene-0.9-mRNA-1:exon:113snap_masked-scaffold899_size83673-processed-gene-0.9-mRNA-1:exon:113Tigriopus kingsejongensisexon
snap_masked-scaffold899_size83673-processed-gene-0.9-mRNA-1:cdssnap_masked-scaffold899_size83673-processed-gene-0.9-mRNA-1:cdsTigriopus kingsejongensisexon
snap_masked-scaffold899_size83673-processed-gene-0.9-mRNA-1:cdssnap_masked-scaffold899_size83673-processed-gene-0.9-mRNA-1:cds-1988467Tigriopus kingsejongensisexon
snap_masked-scaffold899_size83673-processed-gene-0.9-mRNA-1:cdssnap_masked-scaffold899_size83673-processed-gene-0.9-mRNA-1:cds-1988468Tigriopus kingsejongensisexon
snap_masked-scaffold899_size83673-processed-gene-0.9-mRNA-1:cdssnap_masked-scaffold899_size83673-processed-gene-0.9-mRNA-1:cds-1988469Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1988470auto1988470Tigriopus kingsejongensispolypeptide
Tk06724Tk06724Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk06724

>Tk06724 ID=Tk06724|Name=Tk06724|organism=Tigriopus kingsejongensis|type=polypeptide|length=284bp
AREPCSPARELSSPAREPSSPARAGPSDAFRDQFSQELSCTICHELFIRP
KTLPCGHVFCDFCIMQWKRKCDASLACPNCRQRVGRDKITPNIYVENLIH
NFIQGYGPDLKAERDRRLAERQAQVEATDQLLAEKESLRQANRGRPGAPS
GGLSTIHAMFQRVQHNLNRTEGGQSGGVSTRSNTRVIQVDSDSSESNDEA
TSHPEDEHEDEADTDSSMEGEEGAPYGGYGRCYSCDAVPGRPSRDLVEGH
LARPHVVDKDGGEGGGLGKSQPLAIEDETAEEKR
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mRNA from alignment at scaffold899_size83673:79021..82054+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold899_size83673-processed-gene-0.9-mRNA-1 ID=snap_masked-scaffold899_size83673-processed-gene-0.9-mRNA-1|Name=snap_masked-scaffold899_size83673-processed-gene-0.9-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=3034bp|location=Sequence derived from alignment at scaffold899_size83673:79021..82054+ (Tigriopus kingsejongensis)
GCCCGTGAGCCCTGTTCGCCGGCCCGTGAGCTCAGTTCGCCGGCCCGTGA
GCCCAGTTCGCCGGCCCGTGCGGGTCCGTCGGACGCCTTTCGGGACCAGT
TTAGCCAAGAGCTGAGCTGCACCATTTGCCACGAGTTATTCATCCGGGTA
AGCGCGAGTCCAGCCAGGCTAAAGCTAGCCTTGCGGGGAGCTGAGGAGGT
TACTCCGGGTTTGGGTCTGAATTGGGGTCCTTCAAGCCTCGAGGAACCAG
TCGACGTCCGGAGCCCCGCCTAATAGGCGCCGAAATCAGGCCCAGTCACC
ACTGGTTTTTCCCGGCGTCAACGCGCAATGAGGCTGACAACAGCCAAGCT
GTATGTGTAATAGTTTACTCCTACATATAGTATACATATCGCTCTAACGA
CTTCGAGATTTCACTCCAGGTCGATTATCGATATTTGACTTCGCATCGAA
TATCGAGTGTCTTTGACTTCACATCGACTATCGAGTTCCATGAGCGATAT
GATATTCCCTCGAAAAAATTGCGCACATTGCTTTTCTGTCCGGGTACGAG
ACTTGGCTGCTCTCTTGTCACAACTGACCCCGGAAATCTCAGCCATTACT
CATCACATACCTCAAGCATAGTCTATTCTAGTGAGCCAACGAGATCTGGT
TTAGCCGAAACTTCGGTTCGAATCCGAATAGAACAACAGCATTATTTTCC
CCCAAAGTAATGAGCATACAGCTTCGAAGAAGATTTTAATCATTCAAGGT
GTTTGGCCATTATTTCCGACATTACTATGTAGGTTACTGAACTGTTGGAT
TTGTCACTATTCCAAACAGTAATGGAGGCCTTGAACTCCACCACCTAGGC
TCTCGTTGTGCGGCGTGAATTTAATACCGGAACAAATTAATAACACTATC
TCTCACTCCTTGAGTCCGTTTTGCGCACTTAATTGGATTAAATGAGCCGG
GAAAATGCAACATTTCAATCCCTGGGGAAAAAAACTTCAATCCTGGGAAT
GGGCATGGCGAAAAAAAATAGCATTTTCCCGAAAAATCAGAATGACAATT
CCAATCTGAGCAACTCTAATTGGCTACTTTTCTCTATCTCATTATGTGTC
AAATACGATCGATGCATCGGATATCGAACTAACCTAACCTCAGTAATCTA
AATTGGAAGTCCTGTTTCGGTGATCGAATCCGATAATTGAATATGACACA
TCCCTAGTCTTGGTCCTGGCGTGCCCAATCACCATCCAATGGGATCCGCC
GACCCCGTGCTCTTTAGTCATCGATGGTTTTTTTGTTTTGTTTCGTTTGG
AAGGCCCCGGGCATTTCTGCACAGCTAGGAAAATCTCTACGGAGACATGG
TCAGCCTGGCGGTCAAATTTATCATGAATTATTACCTTACCCTCGAGGAA
TGACCACAGGTACGCCCACTTTAATCCCGCAAGGGCAGCCAGCAATAGCT
GTGAGTGAACACCACTAGTGGCCGGAACTTGGCAAGCCCGGGGATCGAAC
CCACGACCCTCGGATAGCGCAATGATAGATGACTGATTGTGCCACTCTAC
CATTGCGCTACGCTGCTTGCCTTCGGGTATGCCCAGATCACTTTTCGCGG
TCGGCTAGGTCCAGTCTGCCAGCGAAACCCGTGGTCTCTCCCCTCAGTCC
CTACCCGTGGTCTCTTCCCTCAGTCCCTGCCCGTGACAGCGGCTCGGTGT
CCGACTCGAGGAGCTCGCTCAGTGTGTTGAAAGCTCACGTTGCCTTTCAG
CCCAAAACCCTACCGTGTGGTCACGTCTTTTGCGATTTTTGCATCATGCA
ATGGAAGCGGAAATGCGATGCTTCGCTGGCCTGCCCCAATTGCCGACAAC
GCGTGGGACGGGACAAAATCACGCCCAATATTTATGTGGAGAACCTCATC
CACAACTTCATCCAAGGCTACGGACCCGATCTGAAGGCGGAGCGCGACCG
CCGATTGGCCGAGCGGCAGGCTCAAGTGGAAGCCACGGACCAGTTGCTAG
CCGAGAAAGAGTCACTCCGACAGGCTAATCGGGGCCGACCCGGAGCGCCC
AGTGGTGGACTGAGTACCATTCACGCCATGTTTCAGCGGGTCCAACATAA
CCTCAATCGGACGGAAGGAGGCCAATCCGGGGGCGTGAGTACGCGATCCA
ACACCAGGTACGCCATGACCGCTTCAAAAAATTGACCGGTCAATGTTATC
AATATAAACACAAATATTGTGTTTGCCATTTGACAAAATTATCTGGTCAG
ACACTCGTTCTTGAATCTGTGAGTCAGGTCGATTCGGACTTCCAAAACGA
TTTGAAAATGTTACAATGATGCGCTAAAATGGGAACACTAACCACTGGAT
GCCTAGTGAATGTTATGCTTATTTCCCGACTAGGGTCATTCAGGTCGATT
CCGACTCTTCCGAGAGCAATGACGAGGCAACATCTCATCCAGAAGACGAG
CATGAAGACGAAGCTGATACCGATTCGTCCATGGAGGGCGAGGAAGGTGC
CCCGTATGGCGGTTACGGAAGATGCTACAGTTGTGGTACGTGTAAACTTA
ACATGAGCCCGTCTGTAACCCTACTTTTTCATTTTTCACCACCGCCATCA
GTAGAAATGGCGAGCATGCTGCAGATATGCGTGTGTAATGTAGTAAAAAG
TGTGGTCATAAAGTGATGTAATAAAATGCCGTCCTTCACAGGGTAGCTAG
CCTGTTTCCGGTCAAGGAAATATCACTTCTTTGGTCAGAACAGCCGAGCA
AATTAAAATATTTTTTTGAAAGGAAAATTGGATTATTTCAAGTGGCCAAG
NGCTTCCTGAATCGAGATTTCCCCGTGGTTGATCTTGGCCACCTCGGAGC
TGGATAAACTCATTTCCAGGTCCTCTAGGAGACAGACGCCGTCCCCGGAC
GGCCCTCCCGTGATTTGGTTGAAGGCCACCTCGCCCGCCCGCACGTAGTC
GACAAAGATGGCGGTGAGGGCGGCGGCCTCGGAAAATCCCAGCCTCTCGC
CATAGAGGACGAGACGGCGGAAGAAAAGCGCTGA
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