snap_masked-scaffold93_size381549-processed-gene-2.18-mRNA-1, snap_masked-scaffold93_size381549-processed-gene-2.18-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namesnap_masked-scaffold93_size381549-processed-gene-2.18-mRNA-1
Unique Namesnap_masked-scaffold93_size381549-processed-gene-2.18-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold93_size381549supercontigscaffold93_size381549:255172..259064 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
vacuolar proton translocating atpase 116 kda subunit asnap_masked-scaffold93_size381549-processed-gene-2.18Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
snap_masked-scaffold93_size381549-processed-gene-2.18-mRNA-1:exon:1004snap_masked-scaffold93_size381549-processed-gene-2.18-mRNA-1:exon:1004Tigriopus kingsejongensisexon
snap_masked-scaffold93_size381549-processed-gene-2.18-mRNA-1:exon:1005snap_masked-scaffold93_size381549-processed-gene-2.18-mRNA-1:exon:1005Tigriopus kingsejongensisexon
snap_masked-scaffold93_size381549-processed-gene-2.18-mRNA-1:exon:1006snap_masked-scaffold93_size381549-processed-gene-2.18-mRNA-1:exon:1006Tigriopus kingsejongensisexon
snap_masked-scaffold93_size381549-processed-gene-2.18-mRNA-1:exon:1007snap_masked-scaffold93_size381549-processed-gene-2.18-mRNA-1:exon:1007Tigriopus kingsejongensisexon
snap_masked-scaffold93_size381549-processed-gene-2.18-mRNA-1:exon:1008snap_masked-scaffold93_size381549-processed-gene-2.18-mRNA-1:exon:1008Tigriopus kingsejongensisexon
snap_masked-scaffold93_size381549-processed-gene-2.18-mRNA-1:exon:1009snap_masked-scaffold93_size381549-processed-gene-2.18-mRNA-1:exon:1009Tigriopus kingsejongensisexon
snap_masked-scaffold93_size381549-processed-gene-2.18-mRNA-1:three_prime_utrsnap_masked-scaffold93_size381549-processed-gene-2.18-mRNA-1:three_prime_utrTigriopus kingsejongensisexon
snap_masked-scaffold93_size381549-processed-gene-2.18-mRNA-1:cdssnap_masked-scaffold93_size381549-processed-gene-2.18-mRNA-1:cdsTigriopus kingsejongensisexon
snap_masked-scaffold93_size381549-processed-gene-2.18-mRNA-1:cdssnap_masked-scaffold93_size381549-processed-gene-2.18-mRNA-1:cds-2013696Tigriopus kingsejongensisexon
snap_masked-scaffold93_size381549-processed-gene-2.18-mRNA-1:cdssnap_masked-scaffold93_size381549-processed-gene-2.18-mRNA-1:cds-2013697Tigriopus kingsejongensisexon
snap_masked-scaffold93_size381549-processed-gene-2.18-mRNA-1:cdssnap_masked-scaffold93_size381549-processed-gene-2.18-mRNA-1:cds-2013698Tigriopus kingsejongensisexon
snap_masked-scaffold93_size381549-processed-gene-2.18-mRNA-1:cdssnap_masked-scaffold93_size381549-processed-gene-2.18-mRNA-1:cds-2013699Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto2013700auto2013700Tigriopus kingsejongensispolypeptide
Tk04409Tk04409Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk04409

>Tk04409 ID=Tk04409|Name=Tk04409|organism=Tigriopus kingsejongensis|type=polypeptide|length=939bp
MDSDDSVVVQFAGDEPRLVTITSVEGLGSSRNGSSTALGRNRTSSYSSLE
QSATAGACQGLFSNMCSFGSDAALFRSEPMSRCQLILQSEAAYNCIAELG
ELGLVQFVDLNPDVSSFQRKFVGEVKRCEEMERKMRYIQRETMRDDIPLL
ETDENPRAPAPREMSELETSLTNLERDLSDVTTNYVSLMKNQQDLLEIKN
LLIKADSFLSDSSLQIADSTHDEESRNTDDANLIDIRADEGFRSMKFNIT
AGVVERTKVVSFERLLWRVSKGNVFIRFSEIEDTGANGALLDKTVFMIFY
QGEALKSRVKKICEGYHAVIYPCPEKASERREMLYGVNTRLEDMRTVLEE
TENHRRRLLQTGASHLRLWFTKIRKIKAIYHCLNLFSFDVTQKAMVAECW
MPENDLQVIQEALRRGAETSGSTIPPILNLVTYIDETPPTFNRLSKYTAG
FQNLVDSYGVNSYREVNPAVYTIATFPFLFAVMFGDVGHALVMFFAGLWM
VMQEKKLEKAAEKSEIFGIFFGGRYIVLLMGLFSIYTGFIYNDIFSKSLN
MFGSRWNYNETVQFPLNMKETVMLDPGNRAQYVGTPYVFGLDPAWALASN
KINFLNGYKMKISLIFGLFHMVFGLTLCLWNKMLKRSYADIFLEFIPQLY
FIVSIFMYLIFMIFYKWTHYYADNATQETNVYSEHCAPNLLITFINMMLF
KGADPDPKLVSICKGRETFMYPGQYYVQVFLVLSGVLMVPIMLFGKPVYT
VLTRRARRRNYEPMADQLLDAEGGTSLEEGNDDQVEIRNGQNRPTNQEGE
GELEFGEIMIYQSIHTIEYVLGTVSHTASYLRLWALSLAHSQLSEVLWTK
GLAIPLEMKNPYVSIPMLFVIFSFWAMASVAILVVMEGLSAFLHTLRLHW
VEFQSKFYKGEGVLFVPFHFKGYLKEAETEDLEVLKGTP
back to top

mRNA from alignment at scaffold93_size381549:255172..259064-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold93_size381549-processed-gene-2.18-mRNA-1 ID=snap_masked-scaffold93_size381549-processed-gene-2.18-mRNA-1|Name=snap_masked-scaffold93_size381549-processed-gene-2.18-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=3893bp|location=Sequence derived from alignment at scaffold93_size381549:255172..259064- (Tigriopus kingsejongensis)
ATGGACTCGGACGACAGTGTGGTTGTTCAATTTGCCGGTGACGAACCCCG
TCTAGTGACAATCACATCGGTGGAAGGCTTAGGTAATCCTATTCTGTTCA
TTTCCAGGCTCCTCTAGGAACGGTAGTTCCACCGCCTTGGGCCGCAATCG
CACTTCCTCCTACTCCTCTTTGGAACAAAGCGCCACTGCGGGTGCTTGCC
AGGGATTATTCTCCAACATGTGCTCCTTTGGCAGCGATGCGGCCTTGTTC
CGCTCCGAGCCCATGTCTCGATGTCAGCTGATCCTCCAATCCGAGGCCGC
CTACAATTGCATTGCGGAACTTGGCGAATTGGGCCTCGTCCAATTCGTGG
ATCTCAACCCGGATGTGTCGTCCTTCCAGAGGAAATTTGTGGGCGAGGTG
AAGCGATGCGAGGAGATGGAAAGGAAGATGAGGTATATCCAACGGGAAAC
CATGAGGGATGATATTCCACTCCTTGAAACAGGTACGTGTTTGTATGTTA
GGGCAAGTAAAGGCTCTAGAGCTCCTACATCACAGTGTGGGTTGAACTAC
GGTATTCTGGAAAGCTTTGTTTTCCATTGGCAGATGAGAATCCCAGGGCT
CCAGCTCCGAGGGAAATGAGCGAATTGGAGACATCTCTCACCAACTTGGA
GAGGGATTTGTCGGATGTGACCACCAACTACGTGTCTTTGATGAAGAACC
AGCAAGACTTGCTGGAGATCAAGAACCTTCTGATCAAGGCCGATAGTTTC
TTGTCTGACAGTTCGTTGCAGATCGCCGATTCAACCCACGATGAGGAATC
CCGAAGTAAGTTCAAAGGCCTGATCCAAGTGCAAGCTGTACTGCCAAGCC
AAAGCCCTAATCAGTTTCAATTATTGCATGGAACTAACGTGTCCACAAGT
GTAACCATTGCATCACTAAAACGATATACATTGTCTGTTTTGTCTCCCTC
GCAGATCTCTTGGAAGGTAAGTGTCACATTTCCCCGATGTCGAAGGTGGT
GGTGGGGTACACTTATGGCAATGCCTTTTTGAAGCGGTTTTGTATGAATC
TAATACTAACACTTAGCCCTCTTTCTCTCTCTCTTTCTCTCTCTATTCGA
CTCCTATAAAAAAGCTATGGGTTTAGTGGACGATCGAGGTACAGTTTGAT
GTATTACCCAAACATCTGGTTGCACCCGGCCCTTCTAATAATTTATCGCT
TGAACGTCGTTGATCCTGTTCCAACTGGTCCCCTCGCTTCTTTATGGGAC
CAGCGATCCTTTTGATTTGGACTGGAAACGATTTTGCCATCCTTAGGGAT
GCACATCTTTTCAATGTGATCCGTCTTCTAGATACTGACGATGCCAATCT
CATTGATATTCGGGCCGACGAAGGATTCCGTAGCATGAAGTTCAACATCA
CAGCCGGCGTGGTGGAGCGAACAAAAGTGGTCTCATTTGAGCGTCTCCTG
TGGCGTGTATCCAAAGGTAAGGGGGGGTCTCATTCGTTTGGCTCTTTTTC
CAGAAATGATTGCCAGTTCAGAGTTTGTAATACCCATGCGTTTTCAGGCA
ATGTCTTCATTCGATTCTCCGAGATCGAGGATACCGGCGCCAATGGCGCT
CTTTTGGATAAGACCGTGTTCATGATCTTTTACCAGGGGGAGGCCTTGAA
GTCTCGCGTGAAGAAGATCTGCGAAGGCTACCACGCCGTGATCTATCCTT
GTCCGGAGAAGGCCTCCGAGCGAAGGGAGATGCTCTACGGGGTTAACACC
AGACTGGAGGACATGAGGACCGTTCTGGAGGAGACCGAGAACCACCGGAG
GCGATTGCTCCAAACTGGGGCGAGTCATCTTCGTCTCTGGTTTACCAAAA
TTCGGAAGATCAAGGCCATCTATCACTGCTTGAACTTGTTCAGCTTCGAT
GTGACCCAAAAGGCCATGGTGGCCGAATGTTGGATGCCCGAGAACGACCT
CCAGGTCATCCAGGAAGCGCTGAGGCGGGGGGCCGAAACCAGCGGATCCA
CTATCCCGCCCATCCTCAACTTGGTGACCTACATAGACGAGACGCCGCCG
ACCTTCAATCGACTGAGCAAGTACACGGCTGGTTTCCAGAATTTGGTTGA
CTCGTACGGAGTCAATTCGTACCGAGAGGTCAATCCCGCCGTGTACACCA
TTGCCACCTTCCCATTCCTGTTCGCTGTCATGTTCGGCGACGTGGGCCAC
GCCCTCGTCATGTTTTTTGCCGGCTTGTGGATGGTGATGCAGGAGAAGAA
GTTGGAGAAGGCTGCGGAGAAGTCCGAGATCTTTGGCATCTTCTTTGGTG
GGCGGTACATCGTCCTCCTGATGGGCTTGTTCTCAATCTACACGGGCTTT
ATCTACAACGACATCTTCAGCAAGTCGTTGAACATGTTCGGTAGCCGCTG
GAACTACAACGAGACGGTCCAGTTCCCACTGAATATGAAAGAAACGGTCA
TGCTGGATCCGGGCAATCGTGCCCAATACGTTGGCACTCCCTACGTGTTC
GGTTTGGACCCGGCCTGGGCTCTGGCCTCGAACAAGATCAACTTCCTCAA
CGGATACAAGATGAAGATCTCGCTCATCTTTGGACTCTTCCACATGGTAT
TCGGGCTCACCCTGTGCCTGTGGAACAAGATGCTGAAACGCTCCTATGCC
GACATCTTTCTGGAATTCATCCCTCAGTTATACTTCATCGTGTCCATCTT
CATGTACCTCATCTTCATGATCTTCTACAAGTGGACCCACTACTACGCCG
ACAACGCCACTCAGGAAACGAATGTCTATTCTGAGCATTGCGCTCCCAAC
CTTTTGATCACCTTCATCAACATGATGCTCTTCAAGGGGGCTGACCCCGA
TCCGAAGTTGGTGTCTATCTGCAAAGGCAGGGAGACCTTCATGTACCCAG
GTCAATACTACGTCCAGGTGTTCCTCGTCCTCTCGGGCGTGCTCATGGTC
CCTATCATGCTCTTTGGCAAGCCCGTCTACACCGTTCTGAGTAGGTTAAA
CAGCAAGTTAGTCAACTCTTGAGGATAATAATTACACATCCCCATTTCTT
TAACGCAGCCCGGCGAGCTCGCCGAAGGAATTACGAGCCCATGGCGGATC
AACTCTTGGATGCCGAGGGCGGAACTTCGCTCGAGGAAGGCAACGACGAC
CAAGTGGAGATTCGCAATGGCCAAAACCGCCCAACCAATCAGGAGGGTGA
GGGTGAATTGGAGTTTGGTGAGATCATGATCTACCAAAGCATCCACACGA
TCGAGTACGTCTTGGGTACTGTGTCGCACACGGCTTCATATCTGCGACTG
TGGGCCTTGTCCCTGGCCCATTCCCAATTGTCTGAGGTATTGTGGACCAA
AGGCCTGGCTATCCCATTGGAAATGAAGAATCCCTACGTGTCGATTCCCA
TGCTCTTCGTCATTTTCTCGTTCTGGGCCATGGCTTCGGTCGCCATCTTG
GTGGTCATGGAGGGCCTGTCGGCCTTCTTGCACACCCTCAGGCTCCACTG
GGTCGAGTTCCAGTCCAAGTTTTACAAGGGCGAGGGAGTTCTGTTCGTTC
CCTTCCACTTCAAGGGATACCTGAAAGAGGCTGAAACTGAAGATCTGGAA
GTCCTCAAAGGGACGCCTTAGATGTAACTTACTACTCGTGACGAGTCACG
TACTATAATTGTCAGTGTGTGCAAATTTAGGCGTCTCCCTGATTGCCCAA
TGATTCGAAACCTATCTATTTTTAATCGTCCCATCTGTTCAATATTACTG
ACTGATCCCAGATCTGTGAAACTGCATGCTTCGATACCAACTTGATTCTC
AGAAACGACCTGTTCTGAAAGTTTGCGCTCAAGATCATCCATGTCTACGT
ACTGAATGTTTCCTTTTCATGAATAAATCAATTTGGCAATGTA
back to top
Add to Basket