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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold961_size76351 | supercontig | scaffold961_size76351:9077..13562 - |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| maker | 2018-02-12 .496401 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| snap_masked-scaffold961_size76351-processed-gene-0.8-mRNA-1:exon:151 | snap_masked-scaffold961_size76351-processed-gene-0.8-mRNA-1:exon:151 | Tigriopus kingsejongensis | exon |
| snap_masked-scaffold961_size76351-processed-gene-0.8-mRNA-1:exon:152 | snap_masked-scaffold961_size76351-processed-gene-0.8-mRNA-1:exon:152 | Tigriopus kingsejongensis | exon |
| snap_masked-scaffold961_size76351-processed-gene-0.8-mRNA-1:exon:153 | snap_masked-scaffold961_size76351-processed-gene-0.8-mRNA-1:exon:153 | Tigriopus kingsejongensis | exon |
| snap_masked-scaffold961_size76351-processed-gene-0.8-mRNA-1:exon:154 | snap_masked-scaffold961_size76351-processed-gene-0.8-mRNA-1:exon:154 | Tigriopus kingsejongensis | exon |
| snap_masked-scaffold961_size76351-processed-gene-0.8-mRNA-1:three_prime_utr | snap_masked-scaffold961_size76351-processed-gene-0.8-mRNA-1:three_prime_utr | Tigriopus kingsejongensis | exon |
| snap_masked-scaffold961_size76351-processed-gene-0.8-mRNA-1:cds | snap_masked-scaffold961_size76351-processed-gene-0.8-mRNA-1:cds | Tigriopus kingsejongensis | exon |
| snap_masked-scaffold961_size76351-processed-gene-0.8-mRNA-1:cds | snap_masked-scaffold961_size76351-processed-gene-0.8-mRNA-1:cds-1958480 | Tigriopus kingsejongensis | exon |
| snap_masked-scaffold961_size76351-processed-gene-0.8-mRNA-1:cds | snap_masked-scaffold961_size76351-processed-gene-0.8-mRNA-1:cds-1958481 | Tigriopus kingsejongensis | exon |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of Tk11636 >Tk11636 ID=Tk11636|Name=Tk11636|organism=Tigriopus kingsejongensis|type=polypeptide|length=360bp
MAFSTLATNLGGRTERLRPLFWTSLMSSPSLRSLLTLRIICLIALVATAS
TVSGQRRAKSLVNTFPFSQGGAAANHAHDHHDHAHAAHPVQAAAPARASR
QGQGDEVALDIGSIAAAGERCIDKVVMVEETEYDEEIECHHSYSERCHTT
YTTDFEPQQEEECEENFKKSCFIEYRKVAFEEPITFCHTPLICEGEGPEE
CKTVYESQCETRYHEHEVEDDVVECETIQEEKCEDKCTKWPKQVCKNEKK
TVKKYTPETECKKVGRELCGPSGCLLQPGPEECFDKKETVVQEVPEETCN
LEPQRSCKHVTKLVPLLKPAEECVDIPKEVCSRSRKNPRKVQKPVVKKWC
YVPSEQSGLA back to topmRNA from alignment at scaffold961_size76351:9077..13562- Legend: polypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >snap_masked-scaffold961_size76351-processed-gene-0.8-mRNA-1 ID=snap_masked-scaffold961_size76351-processed-gene-0.8-mRNA-1|Name=snap_masked-scaffold961_size76351-processed-gene-0.8-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=4486bp|location=Sequence derived from alignment at scaffold961_size76351:9077..13562- (Tigriopus kingsejongensis)
ATGGCCTTCTCGACCTTGGCCACGAACCTAGGAGGAAGAACCGAGCGCCT
CCGACCACTCTTCTGGACCTCCTTGATGTCCTCACCATCTTTAAGGAGCC
TCTTGACCCTCCGGATAGTAACCATACTGACGTCTAAGGCCTCCATGATG
TCCGAATTTTGGACTCCCGCGTGAACGAGAAGGGCTACGTTCTCCTTCTT
TGATTTCATTTTAGGTTTCCGATGTCCTAAAAACGCTTCTTTTATCATTT
CATTTGTTGTGACAGCTTTGCTCTGCCCGTACAAACGTCTAGATTTACTT
GTTATTAAAGTTTTAATCGGATTAAGTGGTTTTTAAAAGGGCGATCAATA
CTTCTGGCGCACCCTGTATACAGTATTTGTTGAGAGTTTCTTCGTTGCTC
AATGTACTGGTCCGTTCCATGGTTAGTGTTGACTTTATGGTATTTTTTTT
TCAAGATCTTCACATTTGTCGCTGGAAAGTAGGTTTTTTCATCTATATTT
GGTGGAAACGTCATTATTTTGGCCATTTTTCAGCGTTTTTAGCCAAATCG
TATTGCTATTTTACAGCCCTCATAACCTTACTTGACTCATGGACTTAAAA
TGTCGGAAAATGCTGGTTTGCGTTTTCAAGGAGGTTTAGATAATTTGCCG
TAGCTTCATAATGTATAAATAAAGTGGTTCATCTTTTGATGAATGATGAA
GATTTGAGTTAATCTCCTGATATATAATCTAAAATATATATTTTGCATCT
TGGTGACAAAAAATTACAATTTAATGGCATATAGTTGAAGAAGCAGCACT
TGAGTGGAGCTTTTTTTGACCATCAATGATCTGGAATTGAAACTATTTAG
GGGGTGACACCTTATGTATCCTTTGATATGAATCCAACCTTAACTCCTGG
CAAAATTTGACGTCATTCACTCCAATGATGGTGAAGCACTGGACCCCAGT
CCAAAAATGTTGTCCTCCCAAAATTGGAGCAACATGTAGGTCGAGTGTGA
AGGCCAAAATTACGGTTTAGTGTTAATACTTAAAATGAAGATTTGAAGGA
CTCGTGGAAATTTACTGAGTTAAGACTATATGAGCTGCACCCTCTAGTTG
TTCTTGACTTTTTAATTAAAGTCTGAAATTGAGGGCAGAAACTTTTGCGT
TTATACTGTGTACATTTTAAATGAAGTTTGAAATAGTTATCCATGTGCAA
CATCCTATCCTATCACCCACTCCCTCTGTCTGTCTCTCCCTCTCTAAGAA
GAGATATATCACTAACAAGAGAACGTAAGTAATCATTCGACGAGGGAGCG
CGATTTCGTCTGAAAATGAAAAAAAGAGACTAGTCTTTTGAGGTTCACTC
GTGAGGTTCCAATTAAAGTTTATTTGCCCAAATGAATCCCCCAGGTCGGG
AATTTAAAGGCAGGAAACGCTTTTGTGCCTTGTTTGTTCGTAGGGTCCTG
GACATTTATGTCCAGACAGGAAATATCTACTGAGAGATGGTCAACCCGGT
GTGCAAATTTTTAATGAATTACTACTTAACCATAGAGGAATTCCCAGATG
TTCGTCTAATTTAATGCTGCCAGGGATGCAAACAATACCTGTGAGTTATC
ATCGCTGGTTTCCAAGACGTGAGAAATATGGGATTCGAACCCTGGTCACA
CAAAACAAGCAAGGCCCTCGCTGACACTGAGCCATGGTGGGTTCATTTTT
TTAGCTGTTCCCTATAATTAAACAATTACCTATTAGCACCTTGCAAAAAC
TATGTTTGGGTCTTTATGGAACCTATGATATATTTTGGCACGAGTTATAC
ACAAAAATGATAATCTTAAACACAGACTTGAACAGACATAATTGTTTTTC
CTTTAATCCCAAAGCAGACAATTCTGGCGGTAAAAAGATTCCAAATGCTC
TCTTAGCCAAGGCAAAGCCCTCGATTGATTAATCAGTCATTTGCCTCGAT
ATAATTTTGGGTTTGATAAATTTGAGAAGCACTTAACAGGTACACCAGAG
TAGCAACGGAAGGTGCAATCCCTTTCCCCCCTGCTCTCAAGGGCTGAGTC
CTTTGCCACCATCTGGAAGAGCAGCAAGGAACTAATGGACATAAAGTGGG
CAGCTTTCGGGGAGTGCTAGGGCCAGCTAGGATGACCCCCATTTAATTTC
TAGTCTTGTCTAAAAAAAAGTCTGTTCTCAAGTCGCTGTTATTTTTCTCT
TGACTTATTCTCTTTTAGAAAAAGTTGCCAAACACTCTTACTACCATATT
GTTGCTAGGTATGGGTCGGTGGGACTATCACGACGTGTCTAACTCGTAAA
AAAGTACGATTTCTCCCCCTGGATAGTATTTGACGGTTGTTGCTGGAAGA
ACCATTGACATCCTTGACGATCGACCATCGATGACTCAATGAATGGACGA
AATGTTTAATCACCGAAGAAAAAAAAGACTAAATTGAAAAGACTATGTCA
ATAAGAATACACAAACGTTTAAACCGGACCATCATATTTTTGGACGATGA
GTAATTGAACCCAACGTTAAAAGTCGCCGTGCGAAGATGAGCATCCTGGG
GGAAGCCTCCTCGTTGGAAGAAGACGCACGCCGTCCGACGGCAAAGTAGA
CAAAAATCAGGCACCGATTTTAAACCACCGAGATGGGGAGAGATGGCGGT
GGTGTACCAGAGTAAAGGGCATATAAAAGGCCCCGGGTTATGGTTGACCA
ATCAGTCCATATTGAGCAGTACTCGTGTCATCAGCACACCTGTAGGCTCT
TTTTTACTCTGAAAAATGGTTGCTTTTGCCAAGGTAAGCAGCTTTGGTAC
AAAAGACTTACCTCAAACCATCCCAAAGCAATTGATAGTGGAGGTCCAGG
ATCCATTGATCCACAATTGGACTACAAACAGATGGTTAAAACAATGTGCT
TCTCCTATTCCTTCTAGATCTGCCTGATCGCCCTTGTGGCCACTGCCTCC
ACCGTCTCTGGCCAACGACGTGCCAAGAGCTTGGTCAACACCTTCCCCTT
CAGTCAGGGTGGTGCTGCTGCAAACCATGCCCATGATCATCATGATCATG
CTCACGCCGCTCACCCCGTCCAAGCTGCTGCCCCCGCCCGTGCTTCCCGT
CAAGGCCAAGGAGACGAAGTCGCTCTCGACATTGGATCCATTGCCGCCGC
CGGAGAGCGTTGCATTGACAAGGTCGTGATGGTGGAGGAGACCGAGTACG
ACGAGGAGATCGAGTGCCACCATAGCTACTCCGAGCGATGCCACACCACT
TACACCACCGACTTTGAGCCCCAGCAGGAGGAAGAGTGCGAGGAGAACTT
CAAGAAGAGCTGCTTCATTGAGTACCGCAAGGTCGCTTTTGAGGAACCCA
TCACCTTCTGCCACACTCCCCTCATCTGCGAGGGCGAGGGACCCGAGGAA
TGCAAGACCGTCTACGAGTCTCAGTGCGAGACCCGCTACCACGAGCACGA
GGTCGAGGATGATGTCGTCGAGTGCGAGACCATCCAGGAGGAGAAGTGCG
AGGATGTGACCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNTCCAGGAGGAGAAGTGCGAGGATGTGACCCAAGGTTACACCACCG
AGCAGAAGTGCACCAAGTGGCCCAAGCAGGTGTGCAAGAACGAGAAGAAG
ACTGTGAAGAAGTACACCCCCGAGACCGAATGTAAGAAGGTCGGTCGAGA
GCTCTGCGGACCCTCCGGTTGTCTTCTCCAACCCGGACCTGAGGAGTGCT
TTGACAAGAAGGAGACTGTTGTCCAGGAGGTGAGTTGCTCCTTGCACGCT
CTTTCCAGCATTTTTTACTTATTCCCCATGTCTTGTTTGCCTTTAGGTGC
CCGAGGAGACCTGCAACTTGGAGCCCCAGAGATCGTGCAAGCACGTCACC
AAGTTGGTGCCTCTGCTCAAGCCCGCCGAGGAGTGTGTGGACATCCCCAA
AGAGGTCTGCTCGCGATCCCGCAAGAATCCCCGCAAGGTGCAAAAGCCCG
TCGTCAAGAAGTGGTGCTACGTGCCATCCGAGCAATCTGGCCTGGCCTAA
GCGCGTTTTGCCTTTGGACAGTCCAACCATCATTGCACTACAGCTCCCAA
CTTCCTATATACAAAAGTCAAAACCTCTCTCTCAGTTTCTTTGCCGTGAC
CCTGAGTCTCTCGCCAAAACTAGTCTTGGAAAGCTGACACATGGCCAAGA
AACCCACTACCAATTAGACGCGGGTGTCCAACCCGCTGGTCGTCAACATC
ATCTGAGAGAAGAACACTTTTGGGCATTATCAAAAG back to top
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