snap_masked-scaffold97_size377342-processed-gene-0.1-mRNA-1, snap_masked-scaffold97_size377342-processed-gene-0.1-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namesnap_masked-scaffold97_size377342-processed-gene-0.1-mRNA-1
Unique Namesnap_masked-scaffold97_size377342-processed-gene-0.1-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold97_size377342supercontigscaffold97_size377342:20574..23392 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
yeats domain containing protein 4snap_masked-scaffold97_size377342-processed-gene-0.1Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
snap_masked-scaffold97_size377342-processed-gene-0.1-mRNA-1:exon:969snap_masked-scaffold97_size377342-processed-gene-0.1-mRNA-1:exon:969Tigriopus kingsejongensisexon
snap_masked-scaffold97_size377342-processed-gene-0.1-mRNA-1:exon:970snap_masked-scaffold97_size377342-processed-gene-0.1-mRNA-1:exon:970Tigriopus kingsejongensisexon
snap_masked-scaffold97_size377342-processed-gene-0.1-mRNA-1:exon:971snap_masked-scaffold97_size377342-processed-gene-0.1-mRNA-1:exon:971Tigriopus kingsejongensisexon
snap_masked-scaffold97_size377342-processed-gene-0.1-mRNA-1:five_prime_utrsnap_masked-scaffold97_size377342-processed-gene-0.1-mRNA-1:five_prime_utrTigriopus kingsejongensisexon
snap_masked-scaffold97_size377342-processed-gene-0.1-mRNA-1:cdssnap_masked-scaffold97_size377342-processed-gene-0.1-mRNA-1:cdsTigriopus kingsejongensisexon
snap_masked-scaffold97_size377342-processed-gene-0.1-mRNA-1:cdssnap_masked-scaffold97_size377342-processed-gene-0.1-mRNA-1:cds-1965471Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1965472auto1965472Tigriopus kingsejongensispolypeptide
Tk12109Tk12109Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk12109

>Tk12109 ID=Tk12109|Name=Tk12109|organism=Tigriopus kingsejongensis|type=polypeptide|length=258bp
MAALIPAFPSQALPERLYGRRLTTEPMSDLGDGSGGGARVKGVTVVKPIV
YGNVSKHFGKKRESDSHTHEWTVYLKAYQNEDISNYVKKVQFKLHESYAN
PNRIVFKPPYEVSETGWGEFEVQIKIHFNDANERPITFYHMLKLFHTGAD
PNTTTALVQGRKTVVSENYDEIIFQEPTQYINTLLTTTRCITLNAYKHET
NFDEKRDKTMDSIKGGRAKVQEEITELKDKLELAKATLAQFKAELDKVSK
EKGEDMVF
back to top

mRNA from alignment at scaffold97_size377342:20574..23392+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold97_size377342-processed-gene-0.1-mRNA-1 ID=snap_masked-scaffold97_size377342-processed-gene-0.1-mRNA-1|Name=snap_masked-scaffold97_size377342-processed-gene-0.1-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=2819bp|location=Sequence derived from alignment at scaffold97_size377342:20574..23392+ (Tigriopus kingsejongensis)
GTCCCCGCCAACCCGCCTCAAAACATGGCAGCCCTGATCCCAGCATTTCC
ATCTCAAGCATTGCCAGAGCGGCTCTATGGGCGGCGTCTGACTACGGAGC
CAATGAGCGATTTGGGCGACGGTTCGGGCGGGGGGGCCCGGGTCAAGGGC
GTGACCGTGGTCAAGCCCATCGTGTACGGCAATGTGTCCAAGCATTTTGG
CAAGAAACGCGAGAGCGACAGTCACACGCACGAGTGGACCGTGTACCTGA
AAGCCTACCAGAACGAGGACATATCCAACTACGTCAAGAAAGTTCAGTTC
AAGCTCCACGAGAGCTACGCCAATCCCAATCGCATCGTCTTCAAACCACC
TTACGAGGTAGGCTCACTGGACGTCAACCCGGGGCGGGTTACCCATTGGG
CTAAGTCATGGAGTACTAGAATCACCTGGAGGTCGCACAGAACGAAAAAT
GGGTCCAGAGACGGCATGGTTGAGGAGGCTCGAAAGCCGTTAATGCTATT
AGTTGACGGGCGAGAGTTGCGGGGACATTTCACCCAGTTCCGTAGGGTTT
CAGAGTGACTAGTTGATAAGGCTCTAAAATCCTACAGAACTGGTAGAAAT
ATTACGCGCAACTCTCGCCCGTCAACTAATAGCATTAACGGCTTTCGAGC
CTCCTCAACCATGCCGTCTTTGGACACATTTTTCGTTCTGTGCGACCTCC
AGGTGATTCTAGCACTCCATGGCTAAGTGTCGACTCAATCAATTTCTAGG
CCTACCCATGGGGTACTAGAATCACCTGGAGGTCGTACAGAGCGAAAAAT
GTGTCCAAAGACGGCATGGTTGAGGAGGCTCGAAAGCCGTTAATGCTATT
AGTTGACGGGCGAGAGTGGCGGGGACATTTCACCCAGTTCCGTAGGGTTT
CAGAGTGACTAGTTGGTGGACTCTTAAACCCCACAGAACTGGTAGAAATA
TCATGAGCACCTCCAGTCCTTCAAGTCATGGCATTAACGGCGTTCGAGCT
TCCTGCGTCTTTGGACACATTTTTCGCTCTGTACGACCTCCAGGTGATTC
TAGTACTCCATGGGCCAGACGACCTTTTCTCATTGGGCTGGGTAAAATGG
CCACGCCCCCAGTTGTCGTGGCGATGATGGGCGCAATCACTGTGTTCTAT
CCACGAGTTTGATCCCGATGTGGGCTCAAAACACCTGTCGCTCCCAAGGA
GCCCACCATCGACGTCAACTCCGCCTGGACGAGAACGCTATACCGCCTTC
TGAGTCACTTGGGCACCGTTTGGATGCCAATTGTAACCCAGCCAGGGCTT
GCCCACTGGGCCAAGTGCCTTGGGTGAAAGAGGTTTGGGTCCGGGGAGAT
TGGTGCGCACCTGGGTTTCTAATAGGGTATCCAAAAATACGGCATCCCAG
ATGACCCAACACGGTCAGACTGGCCGTATTCAAACTCCAGTGTTTGGGAC
GTTTTTAGGCCAAGTTCGACAATTGCAATGCTCTTTTACTGTACATTGTT
GTCTGGACCTACATTTTATCTCAGAAATCCCTTTTCACTTCAAGTGTGTT
TGTTTCAAAGGAAGAAAATATCCGCCCAAGTTTTCAGTCAATTTGTATGT
TAAGATGTTTGCCATTGCAGGCTTCTTACAGAACAAATTGAAAGATCGCG
CGTATGTTCCCAAAAACTGGTGTGAAGATTCCAATGATACCGAAAAGCGA
AAATGTTCAAAGATAGTCCCAGACAAGCCATTTTCCATCACTTTTTTTAG
AGGTCGAGGGTTTGCCAATGGTAAGGTTGGAGCGCAGAACCGGAACCGAT
TTTTTTGGCTTGGCACGGCCGGTTCGAAACCCTCCGTTCCACTCCGCTGG
GCTGAGGATGGAACGGGGCTTTTAAAAACGCACCCCACCCAAGTAAACTG
CACGGACCGGGGATGTGGTTGGCTAGGTCGTATGGGCTCGACTCCTTGAG
CTGGCCACCGATCGAAATGTCTACGGGGGAAAACCCGCCCGTTAAATCAT
AAGCGAATACTGAATCAGGTGTCCTAGGAGAGAGGGGAAGGATTGGGAGT
GTCTAACTCACGGCTGGGTAGATAAGCAGTTGGAGCCATGAGTGCCCAAC
CTGGATGATGGTCGACTTAGTCGATTGAGGCATCGACGACGGCCGCTCTA
TCCTGAACATTCAGCCACTCTATCGTTTTTATGCGGAACTTTCCTCGCGT
AGGTGAGTGAAACCGGCTGGGGTGAGTTCGAGGTCCAGATCAAGATCCAC
TTCAACGATGCCAACGAGCGACCCATCACCTTCTACCACATGCTCAAGCT
CTTTCACACGGGAGCCGATCCCAACACGACCACGGCCCTGGTACAAGGCC
GGAAGACCGTGGTGTCGGAGAACTACGACGAAATCATATTCCAAGAGCCC
ACGCAGGTACGTACGATCCATTTTGCTTGCTGTACTTACCCTGGGTGACA
TCAAAGCGGTTGACCCCCATGCCATTTCTACCTCTTTGGCCCCCCACTTA
ATGGCTTTATGGGCTACCCCCGAACCAGGAGTGACCGTGTCGTCTTCGTC
TGTTCTAGTACATCAACACCCTCCTCACCACCACTAGGTGCATAACCCTG
AACGCGTACAAGCACGAGACCAACTTTGATGAGAAGCGGGACAAAACCAT
GGACAGTATTAAAGGGGGCCGGGCCAAGGTCCAGGAAGAGATCACCGAGT
TGAAAGATAAGCTGGAGCTGGCCAAAGCGACTTTGGCACAGTTCAAGGCC
GAGCTGGACAAAGTGAGCAAGGAGAAGGGCGAGGACATGGTCTTCTAATT
CGTTCGTGGGCATATAATG
back to top
Add to Basket