Tk00010, Tk00010 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk00010
Unique NameTk00010
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length415
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000175Sodium:neurotransmitter symporterPRINTSPR00176NANEUSMPORTcoord: 93..114
score: 65.72
coord: 391..410
score: 38.52
coord: 122..141
score: 42.62
coord: 166..192
score: 46.14
IPR000175Sodium:neurotransmitter symporterPFAMPF00209SNFcoord: 211..407
e-value: 4.1E-76
score: 256.6
coord: 85..210
e-value: 5.7E-48
score: 163.8
IPR000175Sodium:neurotransmitter symporterPANTHERPTHR11616SODIUM/CHLORIDE DEPENDENT TRANSPORTERcoord: 211..408
IPR000175Sodium:neurotransmitter symporterPANTHERPTHR11616SODIUM/CHLORIDE DEPENDENT TRANSPORTERcoord: 81..211
IPR000175Sodium:neurotransmitter symporterPROSITEPS00610NA_NEUROTRAN_SYMP_1coord: 109..123
IPR000175Sodium:neurotransmitter symporterPROSITEPS50267NA_NEUROTRAN_SYMP_3coord: 84..415
score: 68.433
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..24
NoneNo IPR availablePANTHERPTHR11616:SF236SUBFAMILY NOT NAMEDcoord: 81..211
NoneNo IPR availablePANTHERPTHR11616:SF236SUBFAMILY NOT NAMEDcoord: 211..408
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 359..393
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 195..227
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 308..325
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 250..260
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 146..164
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 413..415
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 326..336
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 165..175
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 228..249
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 141..145
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 176..194
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 289..307
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..119
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 337..358
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 261..288
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 394..412
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 120..140
NoneNo IPR availableTMHMMTMhelixcoord: 308..325
NoneNo IPR availableTMHMMTMhelixcoord: 119..141
NoneNo IPR availableTMHMMTMhelixcoord: 255..277
NoneNo IPR availableTMHMMTMhelixcoord: 156..178
NoneNo IPR availableTMHMMTMhelixcoord: 391..413
NoneNo IPR availableTMHMMTMhelixcoord: 337..359
NoneNo IPR availableTMHMMTMhelixcoord: 180..200
NoneNo IPR availableTMHMMTMhelixcoord: 224..246
IPR037272Sodium:neurotransmitter symporter superfamilySUPERFAMILY161070SNF-likecoord: 85..407

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
snap_masked-scaffold342_size201858-processed-gene-1.1-mRNA-1snap_masked-scaffold342_size201858-processed-gene-1.1-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk00010 ID=Tk00010|Name=Tk00010|organism=Tigriopus kingsejongensis|type=polypeptide|length=415bp
MPRRTQRSLSGSGTSSMGLKNGSIRLRSGSAGHQPLHNDEEDHQAIQFSA
NPIIIDPADIKIDEVNPEEEVAGDDGVFEFEDDERGGWDNKLDFLFSCIS
VSVGLGNVWRFPYLCYKNGGGTFLLIYFIAMFACGIPIFFQEVAAGQYLG
SGGATLVGQFVPILKGVGYATMTIVFFLDIYYCIIIAWTLFYLINSFVAI
PDLPWGSCGNRRVLKITSGIDDLGGLNMELLGCLLLGWFIVYGIIWKGLH
SSGKIIWFTALFPYFVMTILLFRSVTLPGASIGLWRYITPDWSKLSDSET
WIDSATQIFFAYSIGTGALPALGSYNKFHHNCVKDTIITCFVNTGTCLFA
GCVTFSILGHMAYNQGVEIEEVVNSGPGLVFITYPEVVLKLPGGPIWAVT
FFVMLVVSFIYISSH
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000175Na/ntran_symport
IPR037272SNS_sf
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0006836neurotransmitter transport
Vocabulary: Molecular Function
TermDefinition
GO:0005328neurotransmitter:sodium symporter activity
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