Tk00143, Tk00143 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk00143
Unique NameTk00143
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length1090
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 169..189
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 879..899
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 798..821
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 718..740
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 707..717
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 651..675
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 572..588
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 589..630
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 822..878
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 778..797
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 676..706
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 741..759
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 760..777
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 900..1090
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 631..650
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..571
NoneNo IPR availableTMHMMTMhelixcoord: 676..698
NoneNo IPR availableTMHMMTMhelixcoord: 574..593
NoneNo IPR availableTMHMMTMhelixcoord: 630..649
NoneNo IPR availableTMHMMTMhelixcoord: 719..741
NoneNo IPR availableTMHMMTMhelixcoord: 799..821
NoneNo IPR availableTMHMMTMhelixcoord: 879..901
NoneNo IPR availableTMHMMTMhelixcoord: 761..778
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 118..147
e-value: 220.0
score: 9.9
coord: 320..349
e-value: 1600.0
score: 3.4
coord: 426..455
e-value: 2.2
score: 17.3
coord: 155..185
e-value: 0.083
score: 22.0
coord: 84..113
e-value: 310.0
score: 8.8
coord: 190..219
e-value: 6.2E-4
score: 29.1
coord: 286..315
e-value: 3.6
score: 16.6
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 155..188
score: 11.114
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 426..458
score: 10.873
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 190..217
score: 9.831
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 244..374
e-value: 9.5E-8
score: 33.6
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 58..229
e-value: 7.2E-28
score: 99.3
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 375..495
e-value: 5.6E-9
score: 37.9
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 284..340
coord: 73..220
coord: 420..465
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 123..218
e-value: 1.7E-14
score: 54.0
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 84..465
score: 27.637
IPR020683Ankyrin repeat-containing domainCDDcd00204ANKcoord: 86..211
e-value: 2.23493E-23
score: 94.3726
IPR020683Ankyrin repeat-containing domainCDDcd00204ANKcoord: 287..465
e-value: 2.25508E-8
score: 51.6154
IPR005821Ion transport domainPFAMPF00520Ion_transcoord: 647..913
e-value: 1.1E-8
score: 34.5
IPR030288Transient receptor potential cation channel subfamily A member 1PANTHERPTHR24190FAMILY NOT NAMEDcoord: 87..958

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold188_size271682-snap-gene-1.26-mRNA-1maker-scaffold188_size271682-snap-gene-1.26-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk00143 ID=Tk00143|Name=Tk00143|organism=Tigriopus kingsejongensis|type=polypeptide|length=1090bp
MERVPLMTMNTSNKVCAQLSCQDAQSGVLDALRRDDPTTFSSILAEECHL
DDTIFLRGSLSDDEKKKLLLPLDHWINQPILEEGEKTLLQVALQHENVDF
SRALLACGAIANLYNDELDQAPIHNAVQSGNLEHVVALLENPFNKADPNM
AMQPSGQTAVHIASDLGKLDILERLLQESKANVNAKDNKGHQTPLFLAAK
RRNAEAVKLLLEHGASLTDLVGTKSVKEAIKENLPYFDVSQVVVKEKPRE
NTLDYLMEMLERRDLAYFKAVLRFLEPSEVSTSGVRGFTVMQKACIEGLD
DYVEVLLDAGVNSNYGTKENSWRPVLLAAARGHFDVLEVFKRYNQKCMKG
SPQTNVGVWTRDTRETILHLILKKSFRRNLQGIYPTPEEISRWDEKYTKS
LEILVDDPSSAFRRQLELVINKKDNMGNSPIHYAAQYWTQETVRQLMQLG
ANIGQRNWRGDIPLHKIAPETLADFLNEDCVTCPQGHDPNTHEDFSVTFH
YDFLAPPIPEEQLEEWDDEQQSRLEKEALPETDTIWYLSQSKAHRHLIKH
PVITSFLWLKWQRIRRFFNRNMRFYAFFVVALTWYIFARFGGHSLQLRGD
QNFKVAHEVGIEESRPPGFCSPIQWSERSYLGFWYVVFALHSCVQVVLAY
RDWTREMRCSSCSKCAWSVLGSWPELFILSLIILTLWMTIGILWLVLSIS
LVLLGLRELFQMASSLKRYFLCLENWIELWLIALVGMILFIPDSALSSDL
EMSCDIKRHMGAVALLLAWAELITMVGRHPRLARYNIYVTMFYKVLETFF
FFLLWYSFFLIAFGLGFYIMLHQDTASKELGGGEGDDGGESYEFFNSPWL
ALVKTSTMFVGEIEFSDIPINLKGPLAPIGYLFLLAFVFLIVVVLMNLLN
GLAVSDTGLIQEEAEIVSYISRVETISYAESILLGDPFDFLSQWAPVSWA
RMCPSGTLLYHLYNSCPALKRLSHKITGATGILLFFSYLPTKQETFPIRR
RSHKHNRGRYDDDEEVEEEDCCPCCHQDDGNYEDVLKSARAILLQRTNPP
AQAGDTALMMKIMDKQDTLMKLVELQHEEMRHLRNMINLK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom
IPR005821Ion_trans_dom
IPR030288TRPA1/painless
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0005216ion channel activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
GO:0006811ion transport
GO:0034220ion transmembrane transport
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0016021integral component of membrane
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