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Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
IPR000276 | G protein-coupled receptor, rhodopsin-like | PRINTS | PR00237 | GPCRRHODOPSN | coord: 178..200 score: 26.33 coord: 313..337 score: 26.47 coord: 97..121 score: 31.38 coord: 130..151 score: 29.72 coord: 357..383 score: 32.41 |
IPR000276 | G protein-coupled receptor, rhodopsin-like | SMART | SM01381 | 7TM_GPCR_Srsx_2 | coord: 106..390 e-value: 0.0024 score: -60.3 |
IPR000276 | G protein-coupled receptor, rhodopsin-like | PFAM | PF00001 | 7tm_1 | coord: 112..375 e-value: 7.4E-36 score: 123.7 |
IPR000276 | G protein-coupled receptor, rhodopsin-like | PROSITE | PS00237 | G_PROTEIN_RECEP_F1_1 | coord: 184..200 |
IPR000611 | Neuropeptide Y receptor family | PRINTS | PR01012 | NRPEPTIDEYR | coord: 178..193 score: 27.84 coord: 362..371 score: 37.27 coord: 373..386 score: 38.64 coord: 122..134 score: 35.31 |
IPR037036 | GMP phosphodiesterase, delta subunit superfamily | GENE3D | 2.70.50.40 | | coord: 551..694 e-value: 5.5E-68 score: 229.3 |
IPR008015 | GMP phosphodiesterase, delta subunit | PFAM | PF05351 | GMP_PDE_delta | coord: 557..693 e-value: 4.1E-41 score: 140.6 |
None | No IPR available | GENE3D | 1.20.1070.10 | | coord: 73..430 e-value: 3.0E-67 score: 228.6 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 458..480 |
None | No IPR available | PANTHER | PTHR12976 | RETINAL ROD RHODOPSIN-SENSITIVE CGMP 3',5'-CYCLIC PHOSPHODIESTERASE DELTA-SUBUNIT | coord: 556..694 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 357..378 |
None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 234..273 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 274..295 |
None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 1..92 |
None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 156..166 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 93..120 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 213..233 |
None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 379..694 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 316..337 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 167..192 |
None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 193..212 |
None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 296..315 |
None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 121..131 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 132..155 |
None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 338..356 |
None | No IPR available | SUPERFAMILY | 81321 | Family A G protein-coupled receptor-like | coord: 90..398 |
None | No IPR available | TMHMM | TMhelix | | coord: 274..296 |
None | No IPR available | TMHMM | TMhelix | | coord: 98..120 |
None | No IPR available | TMHMM | TMhelix | | coord: 316..338 |
None | No IPR available | TMHMM | TMhelix | | coord: 132..154 |
None | No IPR available | TMHMM | TMhelix | | coord: 212..234 |
None | No IPR available | TMHMM | TMhelix | | coord: 169..191 |
IPR017452 | GPCR, rhodopsin-like, 7TM | PROSITE | PS50262 | G_PROTEIN_RECEP_F1_2 | coord: 112..375 score: 32.769 |
IPR014756 | Immunoglobulin E-set | SUPERFAMILY | 81296 | E set domains | coord: 557..694 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk00260 ID=Tk00260|Name=Tk00260|organism=Tigriopus kingsejongensis|type=polypeptide|length=694bp MRLFSPQSSLVIRGKRRAYPMDLDLDFDQIYADLLAPEGVGTWSSDHGVL DFDWDFLENQTYADQLSLELDLESFLEEFQENIEGPASEDDNLAFYLISL AYLTVILIGVSGNILVILAVVSKAKMRNTHNFFITTLAMSDLFFCCISLP ITLWELFHYRWPFGRDTLVLCQLVVCAQVVPLFMSSMAIGGIAMDRYRSV VQNKRSPFSGSSALLICVGMVGLSFLLAGPLFATATLEPLVNFESNPMVA DILICRQEWSSRTVRVAYKVGTCFFQFFLPIGFVMYTNMCIVLRLSHRPP SQHRNLNERRKRTNQIIVSVTVVFFLSWLPLNTFRLLSEFGPAQLHPLLG GREELTFGILNLLGATNACVNPLLYGYFNENFRNEYKYIYRAMPWQRPSA AQFPIKSMEEGTHEKYEDEVSNEPLCNHQVRRDTSMDTNSEAESLHEILH NPVKIFNISETGSPGQTQDQEGRSRSSIPRHATFNVDELDRRIQPFASWP KSSSLTSLSGATTSSLNLCSEGQLIVPTSRATKATTNGLEFDEWTWKKLF NGGTFKSNVKVNWMNLRDADSGKILWQGNEDVSMPEAEHEARVPKKILKC RAVSREINFSSVEPMEKFRLEQKVLYRGRCLEEWNFDFGFVIPNSTNTWQ SLIEAAPESQMMPARVLNGNVVIETRFFDDDLEVSTSKVRLFYV back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Cellular Component
Term | Definition |
GO:0016021 | integral component of membrane |
Vocabulary: Molecular Function
Term | Definition |
GO:0004930 | G-protein coupled receptor activity |
GO:0004983 | neuropeptide Y receptor activity |
Vocabulary: Biological Process
Term | Definition |
GO:0007186 | G-protein coupled receptor signaling pathway |
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