Tk00260, Tk00260 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk00260
Unique NameTk00260
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length694
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000276G protein-coupled receptor, rhodopsin-likePRINTSPR00237GPCRRHODOPSNcoord: 178..200
score: 26.33
coord: 313..337
score: 26.47
coord: 97..121
score: 31.38
coord: 130..151
score: 29.72
coord: 357..383
score: 32.41
IPR000276G protein-coupled receptor, rhodopsin-likeSMARTSM013817TM_GPCR_Srsx_2coord: 106..390
e-value: 0.0024
score: -60.3
IPR000276G protein-coupled receptor, rhodopsin-likePFAMPF000017tm_1coord: 112..375
e-value: 7.4E-36
score: 123.7
IPR000276G protein-coupled receptor, rhodopsin-likePROSITEPS00237G_PROTEIN_RECEP_F1_1coord: 184..200
IPR000611Neuropeptide Y receptor familyPRINTSPR01012NRPEPTIDEYRcoord: 178..193
score: 27.84
coord: 362..371
score: 37.27
coord: 373..386
score: 38.64
coord: 122..134
score: 35.31
IPR037036GMP phosphodiesterase, delta subunit superfamilyGENE3D2.70.50.40coord: 551..694
e-value: 5.5E-68
score: 229.3
IPR008015GMP phosphodiesterase, delta subunitPFAMPF05351GMP_PDE_deltacoord: 557..693
e-value: 4.1E-41
score: 140.6
NoneNo IPR availableGENE3D1.20.1070.10coord: 73..430
e-value: 3.0E-67
score: 228.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 458..480
NoneNo IPR availablePANTHERPTHR12976RETINAL ROD RHODOPSIN-SENSITIVE CGMP 3',5'-CYCLIC PHOSPHODIESTERASE DELTA-SUBUNITcoord: 556..694
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 357..378
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 234..273
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 274..295
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..92
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 156..166
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 93..120
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 213..233
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 379..694
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 316..337
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 167..192
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 193..212
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 296..315
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 121..131
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 132..155
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 338..356
NoneNo IPR availableSUPERFAMILY81321Family A G protein-coupled receptor-likecoord: 90..398
NoneNo IPR availableTMHMMTMhelixcoord: 274..296
NoneNo IPR availableTMHMMTMhelixcoord: 98..120
NoneNo IPR availableTMHMMTMhelixcoord: 316..338
NoneNo IPR availableTMHMMTMhelixcoord: 132..154
NoneNo IPR availableTMHMMTMhelixcoord: 212..234
NoneNo IPR availableTMHMMTMhelixcoord: 169..191
IPR017452GPCR, rhodopsin-like, 7TMPROSITEPS50262G_PROTEIN_RECEP_F1_2coord: 112..375
score: 32.769
IPR014756Immunoglobulin E-setSUPERFAMILY81296E set domainscoord: 557..694

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
snap_masked-scaffold272_size230267-processed-gene-1.9-mRNA-1snap_masked-scaffold272_size230267-processed-gene-1.9-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk00260 ID=Tk00260|Name=Tk00260|organism=Tigriopus kingsejongensis|type=polypeptide|length=694bp
MRLFSPQSSLVIRGKRRAYPMDLDLDFDQIYADLLAPEGVGTWSSDHGVL
DFDWDFLENQTYADQLSLELDLESFLEEFQENIEGPASEDDNLAFYLISL
AYLTVILIGVSGNILVILAVVSKAKMRNTHNFFITTLAMSDLFFCCISLP
ITLWELFHYRWPFGRDTLVLCQLVVCAQVVPLFMSSMAIGGIAMDRYRSV
VQNKRSPFSGSSALLICVGMVGLSFLLAGPLFATATLEPLVNFESNPMVA
DILICRQEWSSRTVRVAYKVGTCFFQFFLPIGFVMYTNMCIVLRLSHRPP
SQHRNLNERRKRTNQIIVSVTVVFFLSWLPLNTFRLLSEFGPAQLHPLLG
GREELTFGILNLLGATNACVNPLLYGYFNENFRNEYKYIYRAMPWQRPSA
AQFPIKSMEEGTHEKYEDEVSNEPLCNHQVRRDTSMDTNSEAESLHEILH
NPVKIFNISETGSPGQTQDQEGRSRSSIPRHATFNVDELDRRIQPFASWP
KSSSLTSLSGATTSSLNLCSEGQLIVPTSRATKATTNGLEFDEWTWKKLF
NGGTFKSNVKVNWMNLRDADSGKILWQGNEDVSMPEAEHEARVPKKILKC
RAVSREINFSSVEPMEKFRLEQKVLYRGRCLEEWNFDFGFVIPNSTNTWQ
SLIEAAPESQMMPARVLNGNVVIETRFFDDDLEVSTSKVRLFYV
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000276GPCR_Rhodpsn
IPR000611NPY_rcpt
IPR037036PDED_dom_sf
IPR008015PDED_dom
IPR017452GPCR_Rhodpsn_7TM
IPR014756Ig_E-set
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0004930G-protein coupled receptor activity
GO:0004983neuropeptide Y receptor activity
Vocabulary: Biological Process
TermDefinition
GO:0007186G-protein coupled receptor signaling pathway
Add to Basket