Tk00523, Tk00523 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk00523
Unique NameTk00523
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length1050
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 845..873
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1013..1050
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1003..1050
NoneNo IPR availablePANTHERPTHR12785:SF6SPLICING FACTOR 3B SUBUNIT 2coord: 464..1050
NoneNo IPR availablePANTHERPTHR12785FAMILY NOT NAMEDcoord: 464..1050
IPR006568PSP, proline-richSMARTSM00581testneucoord: 738..796
e-value: 4.2E-31
score: 119.3
IPR006568PSP, proline-richPFAMPF04046PSPcoord: 742..792
e-value: 1.9E-19
score: 69.1
IPR003034SAP domainSMARTSM00513sap_9coord: 14..48
e-value: 3.6E-5
score: 33.2
IPR003034SAP domainPFAMPF02037SAPcoord: 16..47
e-value: 3.3E-7
score: 29.8
IPR003034SAP domainPROSITEPS50800SAPcoord: 14..48
score: 10.166
IPR007180Domain of unknown function DUF382PFAMPF04037DUF382coord: 608..733
e-value: 3.5E-59
score: 198.4
IPR036361SAP domain superfamilyGENE3D1.10.720.30coord: 7..60
e-value: 2.4E-7
score: 32.2
IPR036361SAP domain superfamilySUPERFAMILY68906SAP domaincoord: 12..51

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold2324_size17203-snap-gene-0.3-mRNA-1maker-scaffold2324_size17203-snap-gene-0.3-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk00523 ID=Tk00523|Name=Tk00523|organism=Tigriopus kingsejongensis|type=polypeptide|length=1050bp
LSFIMSGLPTITQLRALRVVDLKERLVELDLSTQGLKADLINRLHEYFNI
QREGAREARLEAEAAAAAAAPPPVGEPVVVPEATDPEVVPEPEVVPEPEA
TEAAPEIPAAVPEAPEAVPEAAEIVPVVEASLVDQPAPASEVTAHMAAAT
HTVATTPSPQVEAQPHESTALAQTYPEPPTPATPATPEAPVVVELPVVEP
PPTTAPAIPTAQPEESATTVVPPQDTQVTEPEPEVRALASPPTTAELPPT
SPAVEPEAAPMEIPSPETPSGADVTRSPAAAITSAPPLSSGQLRAESPVP
EPMDEDLPPGTTPEPKPSLARIVIPSTAVIKESPALIRQPPVASAYGASD
DLEDEATPAGPQAPVPLMSLNVHRPPPTYEGQEPSGDEPEPMTNVAIPKA
LEEALAYKHERAMQVGVNPADIERVESEGIADQAQPARLPTFRPQTVTDP
NPTPLVDDPELDERSDRGKRHKRKKKRKKNRPEEWARQAAEAERKKKEED
EKPSEPEVEIEYVPEKVELDMADPMYRTFAKIFDAFKIQEEEPEDQSEVP
PQEDIKREELNKVPKLLEEDDLIEPRDADDDDQPKISKRKMKKLNRLSVA
ELKQLVPRPDVVEMHDVTARDPRLLVHLKSTRNTVPVPRHWCFKRKYLQG
KRGIEKPPFDLPDFIKKTGIMEMRAALQEKEDSKTMKTKMREKVRPKLGK
IDIDYQKLHDAFFKWQSKPRMTMHGDLYYEGKEFEIRLKEKKPGDLTDEL
RTALGMPVGPNAHKVPPPWLIAMQRYGPPPSYPNLKIPGLNAAIPESCSF
GYHAGGWGKPPVDEAGKPLYGDVFGTADAAFDQSVPVEEIDTALWGELES
ESEEEEEEESEEEDEEEEGAEGAVASGLQTPVVDAGQATPSGLSSVGGGL
GMETPEQLVDLRKKRIEAEMEGGETPNLYTVIPEKRNERIGTSMMGSTHT
YDITNKGSQPSSTGSKAPGYIDPGGVELALNPEEVDLMDTEAMQARAEAA
LRAKQASLAKEDLSDMVAEHAAKQTSKRKRQAGGKDEGKSGAKKYKEFKF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006568PSP_pro-rich
IPR003034SAP_dom
IPR007180DUF382
IPR036361SAP_dom_sf
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
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