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Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
IPR001030 | Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain | PRINTS | PR00415 | ACONITASE | coord: 518..531 score: 55.25 coord: 295..308 score: 58.16 coord: 233..248 score: 51.4 coord: 391..405 score: 41.36 coord: 219..232 score: 56.27 coord: 309..322 score: 57.58 coord: 190..198 score: 46.94 coord: 166..179 score: 39.21 coord: 456..467 score: 62.07 |
IPR001030 | Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain | PFAM | PF00330 | Aconitase | coord: 87..587 e-value: 2.0E-178 score: 594.0 |
None | No IPR available | GENE3D | 3.30.499.20 | | coord: 23..391 e-value: 2.0E-171 score: 571.2 |
None | No IPR available | GENE3D | 1.10.1440.20 | | coord: 616..677 e-value: 1.3E-29 score: 103.9 |
None | No IPR available | PHOBIUS | SIGNAL_PEPTIDE_N_REGION | Signal peptide N-region | coord: 1..2 |
None | No IPR available | PHOBIUS | SIGNAL_PEPTIDE_H_REGION | Signal peptide H-region | coord: 3..13 |
None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 22..912 |
None | No IPR available | PHOBIUS | SIGNAL_PEPTIDE | Signal Peptide | coord: 1..21 |
None | No IPR available | PHOBIUS | SIGNAL_PEPTIDE_C_REGION | Signal peptide C-region | coord: 14..21 |
None | No IPR available | CDD | cd01586 | AcnA_IRP | coord: 105..589 e-value: 0.0 score: 763.0 |
None | No IPR available | CDD | cd01580 | AcnA_IRP_Swivel | coord: 693..860 e-value: 5.87314E-105 score: 320.377 |
None | No IPR available | SUPERFAMILY | 52016 | LeuD/IlvD-like | coord: 656..911 |
IPR006249 | Aconitase/Iron-responsive element-binding protein 2 | TIGRFAM | TIGR01341 | TIGR01341 | coord: 51..911 e-value: 0.0 score: 1310.6 |
IPR006249 | Aconitase/Iron-responsive element-binding protein 2 | PANTHER | PTHR11670 | ACONITASE | coord: 24..910 |
IPR015931 | Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 | GENE3D | 3.30.499.10 | | coord: 392..615 e-value: 5.7E-107 score: 357.9 |
IPR000573 | Aconitase A/isopropylmalate dehydratase small subunit, swivel domain | PFAM | PF00694 | Aconitase_C | coord: 716..841 e-value: 4.3E-43 score: 146.7 |
IPR015928 | Aconitase/3-isopropylmalate dehydratase, swivel | GENE3D | 3.20.19.10 | | coord: 678..912 e-value: 2.7E-104 score: 349.4 |
IPR029784 | Iron regulatory protein 1 | PANTHER | PTHR11670:SF32 | CYTOPLASMIC ACONITATE HYDRATASE | coord: 24..910 |
IPR018136 | Aconitase family, 4Fe-4S cluster binding site | PROSITE | PS01244 | ACONITASE_2 | coord: 518..531 |
IPR018136 | Aconitase family, 4Fe-4S cluster binding site | PROSITE | PS00450 | ACONITASE_1 | coord: 452..468 |
IPR036008 | Aconitase, iron-sulfur domain | SUPERFAMILY | 53732 | Aconitase iron-sulfur domain | coord: 52..652 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk00863 ID=Tk00863|Name=Tk00863|organism=Tigriopus kingsejongensis|type=polypeptide|length=912bp LTFQLSSVSVLAIKMAPSAPSAPSPFGHLLRDLKVEGHGNLKFFDLASLG PEYGQLPFSIRVLLESAVRNCDNFQVLETDVIKILKWAQNQSVPSGVEVP FRPARVILQDFTGVPAVVDFAAMRDAVQRLGGDPEMINPQCPSDLVIDHS VQVDFVRTPDALSKNEELEFERNKERFTFLKWGAKAFKNMLIVPPGSGIV HQVNLEYLARVCFTDSDIVYPDSVVGTDSHTTMINGLGVVGWGVGGIEAE AVMLGQPISMVLPKVLGYKISGKMHSLVTSTDVVLTITKHLRQIGVVGKF VEFYGPGVASLSIADRATIANMCPEYGATVGYFPVDSQSIDYLKQTNRDA TKIKAIEAYLNAVGMMRNYSDASQDPTFSEVVELDLASVVPSLSGPKRPH DRVSVSDMKTDFLNCLSANIGFKGYGLPKDKLTTTVPFVLNGKEHVISHG AVLIAAITSCTNTSNPSVMLGAGLMAKKAVEKGLSVAPYIKTSLSPGSGV VTYYLKESGVIPYLDALGFSIVGYGCMTCIGNSGPLEEPVSEAIKKGDLV CCGVLSGNRNFEGRIHADTRANYLASPPLVIAYAIAGRVDIDFETEALGQ DADGKPVFLRDIWPSREEIQAVEKKYVIPTMFEEVYSKITTGNDRWNKLE APEGKLYPWDQNSTYIKSPPFFDGMTKELPAPRKVENALPLLNLADSVTT DHISPAGSIARNSPAARFLGSKGITPREFNSYGSRRGNDAVMARGTFANI RLVNKFIGQAGPKTLHIPSNEVMDVFDAAEEYKKENRHLVILAGQDYGCG SSRDWAAKGPFLQGVRAVMAESYERIHRSNLVGMGIVPLQYMSGENADSL GLTAKEEFTVHIPADLKPQQTLEVQVSGKKSFKVLARFDTELELTYYRHG GILNYMIRKMIA back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
Term | Definition |
GO:0003994 | aconitate hydratase activity |
GO:0051539 | 4 iron, 4 sulfur cluster binding |
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