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Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR001723 | Nuclear hormone receptor | PRINTS | PR00398 | STRDHORMONER | coord: 258..273
score: 45.42
coord: 173..194
score: 34.12
coord: 194..210
score: 35.32
coord: 317..334
score: 35.8 |
| IPR000536 | Nuclear hormone receptor, ligand-binding domain | SMART | SM00430 | holi | coord: 172..329
e-value: 1.8E-32
score: 123.9 |
| IPR000536 | Nuclear hormone receptor, ligand-binding domain | PFAM | PF00104 | Hormone_recep | coord: 167..341
e-value: 8.7E-28
score: 97.2 |
| IPR000536 | Nuclear hormone receptor, ligand-binding domain | PROSITE | PS51843 | NR_LBD | coord: 123..349
score: 40.897 |
| None | No IPR available | GENE3D | 1.10.565.10 | | coord: 147..349
e-value: 2.2E-66
score: 225.6 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 38..61 |
| None | No IPR available | PANTHER | PTHR24083:SF87 | NUCLEAR HORMONE RECEPTOR FAMILY | coord: 164..349 |
| None | No IPR available | PANTHER | PTHR24083 | NUCLEAR HORMONE RECEPTOR | coord: 164..349 |
| IPR035500 | Nuclear hormone receptor-like domain superfamily | SUPERFAMILY | 48508 | Nuclear receptor ligand-binding domain | coord: 150..347 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk01458 ID=Tk01458|Name=Tk01458|organism=Tigriopus kingsejongensis|type=polypeptide|length=349bp
MNPYYTAVVAAAGFHLKQPGGRFPSFFPPPFATHHSSALMRPTCSPKSGS
GGSPLPPLFPSLASNGGSSAFTAVSAGSRPTFSREINRTFAVEPKPEETR
NGEPKMNSLRRESFEDKECRRGKLDHEHSMEVSAESGILDCSTEDKEGKI
SHFSPPGILSISSLGHPENIYESAAKLLFMSVKWARSIPSFHQLVARDQN
LLLEETWSQLFIIGLAQWSISFDEATLVKDSVCLDDEKSHLLAKAQRLKD
LVTKINTLRLDHTEYTCLKAIILFKPEIIGIRQPSQVELLQDQTHLMLQE
YCQSKPNLPNGKVRFGRLLLVLPALQAISARTVEMLFFKKTVGNIAMER back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003677 | DNA binding |
| GO:0003707 | steroid hormone receptor activity |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
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