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Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR002347 | Short-chain dehydrogenase/reductase SDR | PRINTS | PR00081 | GDHRDH | coord: 149..168
score: 39.09
coord: 10..27
score: 40.64
coord: 75..86
score: 33.67
coord: 170..187
score: 45.23
coord: 209..229
score: 34.69
coord: 122..138
score: 34.01 |
| IPR002347 | Short-chain dehydrogenase/reductase SDR | PRINTS | PR00080 | SDRFAMILY | coord: 128..136
score: 50.78
coord: 149..168
score: 38.55
coord: 75..86
score: 36.0 |
| None | No IPR available | PFAM | PF13561 | adh_short_C2 | coord: 16..246
e-value: 2.7E-60
score: 203.8 |
| None | No IPR available | GENE3D | 3.40.50.720 | | coord: 4..247
e-value: 5.2E-79
score: 267.0 |
| None | No IPR available | PANTHER | PTHR43477 | FAMILY NOT NAMED | coord: 5..247 |
| None | No IPR available | PANTHER | PTHR43477:SF4 | 3-HYDROXYBUTYRATE DEHYDROGENASE TYPE 2 | coord: 5..247 |
| None | No IPR available | PHOBIUS | SIGNAL_PEPTIDE_N_REGION | Signal peptide N-region | coord: 1..9 |
| None | No IPR available | PHOBIUS | SIGNAL_PEPTIDE | Signal Peptide | coord: 1..25 |
| None | No IPR available | PHOBIUS | SIGNAL_PEPTIDE_H_REGION | Signal peptide H-region | coord: 10..17 |
| None | No IPR available | PHOBIUS | SIGNAL_PEPTIDE_C_REGION | Signal peptide C-region | coord: 18..25 |
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 26..247 |
| IPR020904 | Short-chain dehydrogenase/reductase, conserved site | PROSITE | PS00061 | ADH_SHORT | coord: 136..164 |
| IPR036291 | NAD(P)-binding domain superfamily | SUPERFAMILY | 51735 | NAD(P)-binding Rossmann-fold domains | coord: 7..247 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk01470 ID=Tk01470|Name=Tk01470|organism=Tigriopus kingsejongensis|type=polypeptide|length=247bp
MSSRRLEGKVAVVSAAAQGIGRATAIKWAQEGCQVYAVDLNGDKLKELEH
VDGIVTRKVDVLNKSDIAALADEIDVIDILFNCVGYVHQGTILDCTEDIL
EKSFDINVKGMFLMCQAFLPKMMKQKRGSVVNMSSVVSSIMGAKARFAYG
VTKAAVIGLTKSLAVDYVAYGIRVNSVCPGTVETPSWHDRVNEHEDPAQA
KKDFVQRQKMGRLGTAEEIAHIVTYLGSDESAYATGQEFVIDGGMSL back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016491 | oxidoreductase activity |
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