Tk01551, Tk01551 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk01551
Unique NameTk01551
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length491
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 334..356
e-value: 0.0013
score: 28.0
coord: 362..384
e-value: 0.11
score: 21.6
coord: 467..489
e-value: 0.14
score: 21.3
coord: 306..328
e-value: 0.012
score: 24.9
coord: 418..440
e-value: 0.041
score: 23.0
coord: 390..412
e-value: 4.0E-5
score: 33.0
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 308..328
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 420..440
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 392..412
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 469..489
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 364..384
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 336..356
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 418..445
score: 11.24
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 467..491
score: 11.51
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 306..333
score: 15.293
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 334..361
score: 16.02
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 390..417
score: 12.487
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 362..389
score: 14.149
NoneNo IPR availableGENE3D2.170.270.10coord: 2..167
e-value: 3.2E-7
score: 32.0
NoneNo IPR availableGENE3D3.30.160.60coord: 360..384
e-value: 1.1E-11
score: 46.2
coord: 333..359
e-value: 2.1E-16
score: 61.3
NoneNo IPR availableGENE3D3.30.160.60coord: 453..491
e-value: 2.7E-6
score: 29.0
NoneNo IPR availableGENE3D3.30.160.60coord: 385..410
e-value: 1.8E-9
score: 39.4
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 390..412
e-value: 3.5E-5
score: 23.9
coord: 418..440
e-value: 0.0041
score: 17.4
coord: 307..328
e-value: 5.8E-4
score: 20.1
coord: 362..384
e-value: 5.6E-4
score: 20.1
NoneNo IPR availablePFAMPF13912zf-C2H2_6coord: 334..358
e-value: 3.8E-5
score: 23.4
NoneNo IPR availableGENE3D3.30.160.60coord: 307..332
e-value: 4.6E-10
score: 41.1
NoneNo IPR availableGENE3D3.30.160.60coord: 411..442
e-value: 3.0E-8
score: 35.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 228..284
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 287..301
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 228..301
NoneNo IPR availablePANTHERPTHR44801FAMILY NOT NAMEDcoord: 347..489
coord: 227..408
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 462..490
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 384..436
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 343..399
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 305..356

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold424_size175595-snap-gene-0.23-mRNA-1maker-scaffold424_size175595-snap-gene-0.23-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk01551 ID=Tk01551|Name=Tk01551|organism=Tigriopus kingsejongensis|type=polypeptide|length=491bp
MESRVLLPEELVLCAKNNRECSSSVARLLEQTVGVAARVPLPTGHVFFPL
QGTVRVGKLDIYSTLPDSDVRHDCGAWEEVLELARGRIRQCNWVRFLQTS
PDHPPTQRESSQGAESSDQPGLEANLHYRPNWVTANGQMAFEVVRELAAG
DELVVDFGQIGEKNAPKTTSPSSILIGAISQLMSESPMDLSIPLLRQPLS
LSPSKPPEIKPVPALSIYCGTDSNASSSEDSELSVSLSNSSKSPTWLSPD
RPSSTDTQSSVDTHTNIVIHVNSSNNNNPHVVHPHSGRSSRPKEGTKKGS
KSKRMLSCSFCAKCFDRPSLLNRHLRTHTGERPHVCDICSKGFSTSSSLN
THRRIHSGEKPHSCGVCGKRFTASSNLYYHRMTHVKEKPHKCELCQKSFP
TPGDLKSHMYIHNGSWPHRCHICDRGFSKVTNLKNHIFLHSGNMNMLPKI
PHDGHAQIAVEDRQKPHRCSKCGKCFALGCNMKAHMKTHED
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR036236Znf_C2H2_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
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