Tk01573, Tk01573 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk01573
Unique NameTk01573
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length316
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 36..50
score: 22.07
coord: 123..137
score: 43.54
coord: 255..269
score: 32.88
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 139..176
e-value: 360.0
score: 0.9
coord: 10..49
e-value: 0.021
score: 24.0
coord: 97..136
e-value: 3.6E-8
score: 43.1
coord: 181..223
e-value: 52.0
score: 6.1
coord: 271..309
e-value: 1.8
score: 15.4
coord: 226..268
e-value: 1.9E-4
score: 30.8
IPR001680WD40 repeatPFAMPF00400WD40coord: 228..268
e-value: 6.7E-7
score: 29.8
coord: 101..136
e-value: 2.0E-6
score: 28.3
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 104..139
score: 15.555
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 247..277
score: 11.444
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 246..309
e-value: 1.1E-14
score: 55.9
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 5..245
e-value: 1.4E-40
score: 141.1
NoneNo IPR availablePANTHERPTHR19861WD40 REPEAT PROTEIN SWD2coord: 1..314
NoneNo IPR availableCDDcd00200WD40coord: 15..301
e-value: 1.79631E-46
score: 156.341
IPR037846WD repeat-containing protein 82PANTHERPTHR19861:SF2WD REPEAT-CONTAINING PROTEIN 82coord: 1..314
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 255..269
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 17..316
score: 24.389
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 9..303

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
snap_masked-scaffold907_size82601-processed-gene-0.9-mRNA-1snap_masked-scaffold907_size82601-processed-gene-0.9-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk01573 ID=Tk01573|Name=Tk01573|organism=Tigriopus kingsejongensis|type=polypeptide|length=316bp
MKLIDPVIRSMRVGKVFKDNTEGVNHMNFSGCGGYMISSAEDDQIIIYDC
EKGVQKKCVNSKKYGVDLIHFTHQNKNNVVHASTKENDIIRLLDVQENKY
LQYFRGHSKKVVALCMSPTDDAFLSGSTDKTIRLWDLRSPNCQGLMHLAG
RPVAAFDPEGLIFAAGINSESVKLYDLRSFDKGPFSSFKFPVDKDVEWTG
LKFSPDGKSILVSTNGSFIRLIDSFGGSSLQTFTGHLNSKHLPLEASFSP
DSQFIISGSTDGRLHIWNAENGTKVCVLNGDHSGPVQCVQFNPKYMLMAS
ACKNMAFWLPSVDEDL
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020472G-protein_beta_WD-40_rep
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR037846WDR82
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: Cellular Component
TermDefinition
GO:0072357PTW/PP1 phosphatase complex
GO:0048188Set1C/COMPASS complex
Add to Basket