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Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
IPR020472 | G-protein beta WD-40 repeat | PRINTS | PR00320 | GPROTEINBRPT | coord: 36..50 score: 22.07 coord: 123..137 score: 43.54 coord: 255..269 score: 32.88 |
IPR001680 | WD40 repeat | SMART | SM00320 | WD40_4 | coord: 139..176 e-value: 360.0 score: 0.9 coord: 10..49 e-value: 0.021 score: 24.0 coord: 97..136 e-value: 3.6E-8 score: 43.1 coord: 181..223 e-value: 52.0 score: 6.1 coord: 271..309 e-value: 1.8 score: 15.4 coord: 226..268 e-value: 1.9E-4 score: 30.8 |
IPR001680 | WD40 repeat | PFAM | PF00400 | WD40 | coord: 228..268 e-value: 6.7E-7 score: 29.8 coord: 101..136 e-value: 2.0E-6 score: 28.3 |
IPR001680 | WD40 repeat | PROSITE | PS50082 | WD_REPEATS_2 | coord: 104..139 score: 15.555 |
IPR001680 | WD40 repeat | PROSITE | PS50082 | WD_REPEATS_2 | coord: 247..277 score: 11.444 |
IPR015943 | WD40/YVTN repeat-like-containing domain superfamily | GENE3D | 2.130.10.10 | | coord: 246..309 e-value: 1.1E-14 score: 55.9 |
IPR015943 | WD40/YVTN repeat-like-containing domain superfamily | GENE3D | 2.130.10.10 | | coord: 5..245 e-value: 1.4E-40 score: 141.1 |
None | No IPR available | PANTHER | PTHR19861 | WD40 REPEAT PROTEIN SWD2 | coord: 1..314 |
None | No IPR available | CDD | cd00200 | WD40 | coord: 15..301 e-value: 1.79631E-46 score: 156.341 |
IPR037846 | WD repeat-containing protein 82 | PANTHER | PTHR19861:SF2 | WD REPEAT-CONTAINING PROTEIN 82 | coord: 1..314 |
IPR019775 | WD40 repeat, conserved site | PROSITE | PS00678 | WD_REPEATS_1 | coord: 255..269 |
IPR017986 | WD40-repeat-containing domain | PROSITE | PS50294 | WD_REPEATS_REGION | coord: 17..316 score: 24.389 |
IPR036322 | WD40-repeat-containing domain superfamily | SUPERFAMILY | 50978 | WD40 repeat-like | coord: 9..303 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk01573 ID=Tk01573|Name=Tk01573|organism=Tigriopus kingsejongensis|type=polypeptide|length=316bp MKLIDPVIRSMRVGKVFKDNTEGVNHMNFSGCGGYMISSAEDDQIIIYDC EKGVQKKCVNSKKYGVDLIHFTHQNKNNVVHASTKENDIIRLLDVQENKY LQYFRGHSKKVVALCMSPTDDAFLSGSTDKTIRLWDLRSPNCQGLMHLAG RPVAAFDPEGLIFAAGINSESVKLYDLRSFDKGPFSSFKFPVDKDVEWTG LKFSPDGKSILVSTNGSFIRLIDSFGGSSLQTFTGHLNSKHLPLEASFSP DSQFIISGSTDGRLHIWNAENGTKVCVLNGDHSGPVQCVQFNPKYMLMAS ACKNMAFWLPSVDEDL back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
Term | Definition |
GO:0005515 | protein binding |
Vocabulary: Cellular Component
Term | Definition |
GO:0072357 | PTW/PP1 phosphatase complex |
GO:0048188 | Set1C/COMPASS complex |
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