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Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
IPR000301 | Tetraspanin | PRINTS | PR00259 | TMFOUR | coord: 23..46 score: 31.74 coord: 62..88 score: 21.28 coord: 89..117 score: 20.91 coord: 222..248 score: 17.89 |
IPR008952 | Tetraspanin, EC2 domain superfamily | GENE3D | 1.10.1450.10 | | coord: 119..200 e-value: 4.3E-11 score: 44.5 |
IPR008952 | Tetraspanin, EC2 domain superfamily | SUPERFAMILY | 48652 | Tetraspanin | coord: 118..210 |
IPR018499 | Tetraspanin/Peripherin | PFAM | PF00335 | Tetraspannin | coord: 22..243 e-value: 8.0E-38 score: 130.3 |
None | No IPR available | PANTHER | PTHR19282:SF376 | SUBFAMILY NOT NAMED | coord: 20..253 |
None | No IPR available | PANTHER | PTHR19282 | TETRASPANIN | coord: 20..253 |
None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 246..329 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 220..245 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 51..82 |
None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 83..93 |
None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 1..22 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 23..45 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 94..120 |
None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 46..50 |
None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 121..219 |
None | No IPR available | TMHMM | TMhelix | | coord: 222..244 |
None | No IPR available | TMHMM | TMhelix | | coord: 23..45 |
None | No IPR available | TMHMM | TMhelix | | coord: 95..117 |
None | No IPR available | TMHMM | TMhelix | | coord: 60..82 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk02012 ID=Tk02012|Name=Tk02012|organism=Tigriopus kingsejongensis|type=polypeptide|length=329bp MSSNRAQYAQVTPQCCPLEAQKFVFVIFNLVFLALGLLVGGVGLWTRYHH WFILLVMHTFTYSIIIWLMVSVAILSLLGSALGCIGTKLEQKCWIAVFNL VLILVLVLNITIGMLCLVYHEQVGQDLTRNLKSVFTQSYHVDMERTNAID SIQQQYKCCGGEIFEDWHQSPWYFAASKRNKVPDSCCKSMSNSCGRRDHP SNIPYTGCRHPMAIEMRKNMVILGGLGLGGSILVMCILLFSLLFFRNLSR MESNGKQSTVKNLEVSNNGYHPVYGGKFMRAFSSGRQPRAPGPGRPWRRR CTGWAAGSCAAHAGSDGGWAVALHRPEAE back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Cellular Component
Term | Definition |
GO:0016021 | integral component of membrane |
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