Tk02012, Tk02012 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk02012
Unique NameTk02012
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length329
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000301TetraspaninPRINTSPR00259TMFOURcoord: 23..46
score: 31.74
coord: 62..88
score: 21.28
coord: 89..117
score: 20.91
coord: 222..248
score: 17.89
IPR008952Tetraspanin, EC2 domain superfamilyGENE3D1.10.1450.10coord: 119..200
e-value: 4.3E-11
score: 44.5
IPR008952Tetraspanin, EC2 domain superfamilySUPERFAMILY48652Tetraspanincoord: 118..210
IPR018499Tetraspanin/PeripherinPFAMPF00335Tetraspannincoord: 22..243
e-value: 8.0E-38
score: 130.3
NoneNo IPR availablePANTHERPTHR19282:SF376SUBFAMILY NOT NAMEDcoord: 20..253
NoneNo IPR availablePANTHERPTHR19282TETRASPANINcoord: 20..253
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 246..329
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 220..245
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 51..82
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 83..93
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..22
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 23..45
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 94..120
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 46..50
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 121..219
NoneNo IPR availableTMHMMTMhelixcoord: 222..244
NoneNo IPR availableTMHMMTMhelixcoord: 23..45
NoneNo IPR availableTMHMMTMhelixcoord: 95..117
NoneNo IPR availableTMHMMTMhelixcoord: 60..82

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold419_size176504-snap-gene-0.32-mRNA-1maker-scaffold419_size176504-snap-gene-0.32-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk02012 ID=Tk02012|Name=Tk02012|organism=Tigriopus kingsejongensis|type=polypeptide|length=329bp
MSSNRAQYAQVTPQCCPLEAQKFVFVIFNLVFLALGLLVGGVGLWTRYHH
WFILLVMHTFTYSIIIWLMVSVAILSLLGSALGCIGTKLEQKCWIAVFNL
VLILVLVLNITIGMLCLVYHEQVGQDLTRNLKSVFTQSYHVDMERTNAID
SIQQQYKCCGGEIFEDWHQSPWYFAASKRNKVPDSCCKSMSNSCGRRDHP
SNIPYTGCRHPMAIEMRKNMVILGGLGLGGSILVMCILLFSLLFFRNLSR
MESNGKQSTVKNLEVSNNGYHPVYGGKFMRAFSSGRQPRAPGPGRPWRRR
CTGWAAGSCAAHAGSDGGWAVALHRPEAE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000301Tetraspanin
IPR008952Tetraspanin_EC2_sf
IPR018499Tetraspanin/Peripherin
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
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