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Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
IPR014027 | UDP-glucose/GDP-mannose dehydrogenase, C-terminal | SMART | SM00984 | UDPG_MGDP_dh_C_a_2_a | coord: 277..379 e-value: 1.6E-45 score: 167.2 coord: 958..1044 e-value: 4.2E-19 score: 79.5 |
IPR014027 | UDP-glucose/GDP-mannose dehydrogenase, C-terminal | PFAM | PF03720 | UDPG_MGDP_dh_C | coord: 277..378 e-value: 2.4E-30 score: 104.9 coord: 958..1035 e-value: 2.8E-16 score: 59.8 |
None | No IPR available | GENE3D | 3.40.50.720 | | coord: 392..687 e-value: 1.7E-92 score: 311.8 |
None | No IPR available | GENE3D | 3.40.50.720 | | coord: 688..837 e-value: 1.7E-39 score: 137.4 |
None | No IPR available | GENE3D | 3.40.50.720 | | coord: 192..391 e-value: 1.2E-75 score: 255.6 |
None | No IPR available | GENE3D | 3.40.50.720 | | coord: 841..1042 e-value: 5.3E-50 score: 172.0 |
None | No IPR available | GENE3D | 1.20.5.100 | | coord: 161..191 e-value: 3.7E-15 score: 57.5 |
None | No IPR available | GENE3D | 3.40.50.720 | | coord: 1..159 e-value: 4.2E-56 score: 191.5 |
None | No IPR available | PANTHER | PTHR43750:SF3 | SUBFAMILY NOT NAMED | coord: 693..1039 |
None | No IPR available | PANTHER | PTHR43750:SF3 | SUBFAMILY NOT NAMED | coord: 1..390 |
None | No IPR available | PANTHER | PTHR43750 | FAMILY NOT NAMED | coord: 693..1039 coord: 1..390 |
None | No IPR available | CDD | cd05230 | UGD_SDR_e | coord: 392..684 e-value: 3.75209E-175 score: 511.412 |
IPR001732 | UDP-glucose/GDP-mannose dehydrogenase, N-terminal | PFAM | PF03721 | UDPG_MGDP_dh_N | coord: 695..811 e-value: 1.2E-17 score: 64.0 coord: 1..144 e-value: 4.6E-43 score: 146.9 |
IPR017476 | UDP-glucose/GDP-mannose dehydrogenase | TIGRFAM | TIGR03026 | TIGR03026 | coord: 2..375 e-value: 6.4E-117 score: 388.7 coord: 692..1039 e-value: 2.5E-96 score: 320.9 |
IPR016040 | NAD(P)-binding domain | PFAM | PF16363 | GDP_Man_Dehyd | coord: 392..677 e-value: 9.8E-48 score: 163.1 |
IPR014026 | UDP-glucose/GDP-mannose dehydrogenase, dimerisation | PFAM | PF00984 | UDPG_MGDP_dh | coord: 843..931 e-value: 1.8E-22 score: 79.2 coord: 161..253 e-value: 2.4E-36 score: 123.7 |
IPR036291 | NAD(P)-binding domain superfamily | SUPERFAMILY | 51735 | NAD(P)-binding Rossmann-fold domains | coord: 2..165 |
IPR036291 | NAD(P)-binding domain superfamily | SUPERFAMILY | 51735 | NAD(P)-binding Rossmann-fold domains | coord: 699..832 |
IPR036291 | NAD(P)-binding domain superfamily | SUPERFAMILY | 51735 | NAD(P)-binding Rossmann-fold domains | coord: 392..686 |
IPR008927 | 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily | SUPERFAMILY | 48179 | 6-phosphogluconate dehydrogenase C-terminal domain-like | coord: 161..255 |
IPR008927 | 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily | SUPERFAMILY | 48179 | 6-phosphogluconate dehydrogenase C-terminal domain-like | coord: 842..933 |
IPR036220 | UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily | SUPERFAMILY | 52413 | UDP-glucose/GDP-mannose dehydrogenase C-terminal domain | coord: 263..389 |
IPR036220 | UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily | SUPERFAMILY | 52413 | UDP-glucose/GDP-mannose dehydrogenase C-terminal domain | coord: 943..1036 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk02209 ID=Tk02209|Name=Tk02209|organism=Tigriopus kingsejongensis|type=polypeptide|length=1044bp MKNGEVPIYEPQLDVLFERNQKQGRLKFSTDLESSIENAEIIFLALPTPP GEDGSADLSYILGVADQLGKLIKDYKVIIDKSTVPVGTADKVKEAIAKNT SIGFDVVSNPEFLREGFAVSDFLKPDRVVIGTESAKARKILEELYKPFVR QGNPIYFMDERSAELTKYAANSFLATKITFMNVIANFCEIVGADVDMVRK GIGSDARIGNRFLFPGIGYGGSCFPKDVKALIKSGTDNGYDFKIINSVIE VNEKQKVILVDKIKQYYGGDLKGKNIALWGLAFKPDTDDIREAPALYIID ALLAEGCTIQAFDPEAMKNVKEIYGSKISFMENQYDALENADFLIVATEW QVFRTPDFKRIKETLTEPTIFDGRNLYDLEDMKKLGFRYQSSHLCDRFIK DGYHVIAMDNLITGRIKNIEHLFPLENFEFHNHDISNYVHVSGELDYILH FASPASPIDYLKIPIQTLKVGSLGTHNLLGLAKAKNARMLIASTSEVYGD PEVHPQTEEYWGNVNPIGPRGVYDEAKRFQEAITMAYHRFHEVETRIIRI FNTYGPRMRLNDGRVLPAFIGQALRGEDLTVFGDGSQTRSFCYVDDLVEG ICRLLQSDYAEPVNIGNPDEITIGDFAEEIIKLTGTSQKVIYMELPENDP KKRRPDITKAKELLGWEPKVSRQEGLKLTYDFFKSLSKKELSEELDSKDF ENSDITFTANLDDLKSASFYIIAVPTPIDESNLPDLSPLLGASKTVGQVL SKGDYVIYESTVYPGCTEDDCIPVLEEVSGLKWKEDFKVGYSPERINPGD KVHTLRTIVKVASACCPEALEEVAKTYELVVDAGVHRAASIKVAEASKII ENTQRDVNIALINELSIIFNRVGINTYDVLAAAGTKWNFLNFQPGLVGGH CIGVDPYYLTHKAKKTGYHAKVINSGRYVNDSMGFYIGKQTVKKILAQGT NIMDARVLVMGATFKEDVSDIRNSKVVDVIRELESFSCNVEVVDPHASSE ELNHEYGFGLVTEPTGKYDAIILAVNHKEYASLEESYFKTFLHP back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
Term | Definition |
GO:0051287 | NAD binding |
GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor |
Vocabulary: Biological Process
Term | Definition |
GO:0055114 | oxidation-reduction process |
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