Tk02442, Tk02442 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk02442
Unique NameTk02442
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length708
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000210BTB/POZ domainSMARTSM00225BTB_4coord: 103..198
e-value: 8.0E-18
score: 75.2
IPR000210BTB/POZ domainPFAMPF00651BTBcoord: 93..188
e-value: 2.5E-21
score: 75.9
IPR000210BTB/POZ domainPROSITEPS50097BTBcoord: 103..168
score: 20.975
NoneNo IPR availableGENE3D1.10.10.60coord: 480..520
e-value: 1.2E-6
score: 29.8
NoneNo IPR availableGENE3D3.30.710.10coord: 75..190
e-value: 1.4E-28
score: 101.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 685..708
NoneNo IPR availablePANTHERPTHR23110BTB DOMAIN TRANSCRIPTION FACTORcoord: 67..486
IPR007889DNA binding HTH domain, Psq-typePFAMPF05225HTH_psqcoord: 482..516
e-value: 4.8E-6
score: 26.1
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 477..529
IPR011333SKP1/BTB/POZ domain superfamilySUPERFAMILY54695POZ domaincoord: 78..188

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
snap_masked-scaffold380_size190731-processed-gene-0.7-mRNA-1snap_masked-scaffold380_size190731-processed-gene-0.7-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk02442 ID=Tk02442|Name=Tk02442|organism=Tigriopus kingsejongensis|type=polypeptide|length=708bp
MKICQFGDQDAAVTLQPFQERQTQSDRGRSPAMSTSSPHASRPQSSSPPS
SLKITEDNPPEDLSPPESSKESPESQHYCLKWNNYQTNLTSVFDQLLQTE
AFVDVTLTSEGQVIKCHKVVLSACSPYFQSLLADNPSQHPIVILRDITWN
DLKYIVEYMYKGEINVSYDELPSVLKSAEALNIRGLVEFGAKGQGDLLNL
SQDMVLRPTNTKFPPPLVDYRPHKRKRTDSLSCDGPPHPGPAQQAPGSMP
YPTNSREKSRSPPAYPAHVGGPASPFHARGSHASHSPPSSRGTPQTGAHP
PSLLSLSNNKSMMMDDLSDVKPGIMELIQEERRAKLLEASQITQSWMNQQ
PKANAPSSSSTGISASGRGNGANSSTSPVPDQHDLFDGLAPQIQRSSPKN
SCSWAHNNNNNHSKLLHHDSDNFNGNEAYLGRASGPAGITSPTGGKVAAG
SIDPNHPSSNSSSSQQKPSGSGSSTKQPSWSQEQLQEAIYSVITQKMRFT
QASSRYGIPKGTLYDNILGKSNRMKALEEIALGHEQEIGILEFCCEISMM
PYNRRTSRSLPAVIAFVENLINRTKSRKLGGEFKFNLRKGFRWWWAFCKK
YSIISLYFDNSQPLVDVSKVDLDSDTFDTVQCNDVVLPLPPPPPAHSQPV
MRAPHPLMSSYYHEVAHIYSQYLAPHHPVAVAHQTHGAASPQSPFHPQNL
SLPHGRKV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000210BTB/POZ_dom
IPR007889HTH_Psq
IPR009057Homeobox-like_sf
IPR011333SKP1/BTB/POZ_sf
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0003677DNA binding
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