Tk02590, Tk02590 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk02590
Unique NameTk02590
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length409
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 393..409
NoneNo IPR availableGENE3D1.10.10.60coord: 250..329
e-value: 1.3E-22
score: 81.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 336..377
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 341..377
NoneNo IPR availablePANTHERPTHR24329FAMILY NOT NAMEDcoord: 239..373
coord: 100..182
NoneNo IPR availablePANTHERPTHR24329:SF256EYEGONE, ISOFORM A-RELATEDcoord: 239..373
coord: 100..182
IPR001356Homeobox domainSMARTSM00389HOX_1coord: 265..330
e-value: 1.3E-21
score: 87.8
IPR001356Homeobox domainPFAMPF00046Homeoboxcoord: 266..325
e-value: 3.3E-18
score: 65.1
IPR001356Homeobox domainPROSITEPS50071HOMEOBOX_2coord: 263..326
score: 17.734
IPR001356Homeobox domainCDDcd00086homeodomaincoord: 266..327
e-value: 5.45768E-22
score: 86.1432
IPR001523Paired domainSMARTSM00351pax3coord: 46..170
e-value: 4.1E-15
score: 66.2
IPR001523Paired domainPFAMPF00292PAXcoord: 107..170
e-value: 5.6E-27
score: 94.0
IPR001523Paired domainPROSITEPS51057PAIRED_2coord: 46..172
score: 24.49
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 115..193
e-value: 8.6E-34
score: 117.3
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 259..330
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 112..171

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
snap_masked-scaffold599_size127490-processed-gene-0.2-mRNA-1snap_masked-scaffold599_size127490-processed-gene-0.2-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk02590 ID=Tk02590|Name=Tk02590|organism=Tigriopus kingsejongensis|type=polypeptide|length=409bp
MSKMSPAMPVPSSPLQASFIDHLRGLRDKGDGLGGLDLASQMSALSALSV
QQRQFLELQQRYLSMNRLPWMGGSSPLVVSSAPTMSTSVLHPTATRMSPT
ISPLGPKRPNGMIGGSKPKVATPEVVGKIESYKHENPTIFAWEIREKLIA
DGVCTNSTAPSVSSINRILRNRAAERAATEYARTAGMIHGMYPNYAPHPY
YSPSLLSQLGHHPPPSGLLASPPKSHTEFSKLKRDEECPKSPLTPIDVDG
RSEAESCSDDEKPQFRRSRTSFNSDQLDLLEKEFEKSHYPDLKTREDLSA
RTSLTLMQLLSVQVWFSNRRAKWRRHHRVGLFRPFEVGTPSLPATTESPI
HHSDTRSPRSPSGGVSPPPSHLQTPLTLNPALGIDFTKIFAKAQEERMRL
EGLTSQRAD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001356Homeobox_dom
IPR001523Paired_dom
IPR036388WH-like_DNA-bd_sf
IPR009057Homeobox-like_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
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