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Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR001030 | Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain | PRINTS | PR00415 | ACONITASE | coord: 453..464
score: 62.07
coord: 515..528
score: 55.83
coord: 161..169
score: 45.8
coord: 137..150
score: 34.26
coord: 360..374
score: 41.09
coord: 266..279
score: 55.1
coord: 280..293
score: 53.06
coord: 204..219
score: 51.4
coord: 190..203
score: 58.02 |
| IPR001030 | Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain | PFAM | PF00330 | Aconitase | coord: 60..584
e-value: 4.7E-171
score: 569.7 |
| IPR006249 | Aconitase/Iron-responsive element-binding protein 2 | TIGRFAM | TIGR01341 | TIGR01341 | coord: 11..926
e-value: 0.0
score: 1212.5 |
| IPR006249 | Aconitase/Iron-responsive element-binding protein 2 | PANTHER | PTHR11670 | ACONITASE | coord: 9..926 |
| IPR015928 | Aconitase/3-isopropylmalate dehydratase, swivel | GENE3D | 3.20.19.10 | | coord: 677..927
e-value: 6.4E-90
score: 302.4 |
| None | No IPR available | GENE3D | 3.30.499.20 | | coord: 2..360
e-value: 5.1E-156
score: 520.5 |
| None | No IPR available | GENE3D | 1.10.1440.20 | | coord: 614..673
e-value: 1.8E-15
score: 58.5 |
| None | No IPR available | PANTHER | PTHR11670:SF1 | ACONITATE HYDRATASE | coord: 9..926 |
| None | No IPR available | SUPERFAMILY | 52016 | LeuD/IlvD-like | coord: 653..926 |
| IPR015931 | Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 | GENE3D | 3.30.499.10 | | coord: 361..612
e-value: 1.4E-93
score: 314.1 |
| IPR000573 | Aconitase A/isopropylmalate dehydratase small subunit, swivel domain | PFAM | PF00694 | Aconitase_C | coord: 715..857
e-value: 2.4E-38
score: 131.4 |
| IPR018136 | Aconitase family, 4Fe-4S cluster binding site | PROSITE | PS00450 | ACONITASE_1 | coord: 449..465 |
| IPR018136 | Aconitase family, 4Fe-4S cluster binding site | PROSITE | PS01244 | ACONITASE_2 | coord: 515..528 |
| IPR036008 | Aconitase, iron-sulfur domain | SUPERFAMILY | 53732 | Aconitase iron-sulfur domain | coord: 435..647
coord: 15..406 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk02592 ID=Tk02592|Name=Tk02592|organism=Tigriopus kingsejongensis|type=polypeptide|length=928bp
MDTLRTFENGSFHSLPALKSLGIADVSRLPISIRIVIESLLRNLDGRKVT
ESDVKNLANWNAKSPGDYEVPFTVARVVLQDFTGVPLVVDLAAMRDAAAN
AGADPAIVEPLVPVDLVVDHSVQVDFAGSQSALDRNLSIEFIRNQERYEF
LKWGQQAFETFGVVPPGIGIVHQVNLEHLATGVLSKDEVFYPDTLVGTDS
HTTMINGLGVVGWGVGGIEAEAGMLGQPVTFLVPEVVGVYLHGKLAEGVT
ATDLTLRITEILRAHGVVGKFVEFYGPGAEALSLPDRATIANMAPEYGAT
MGFFPLDSETINYLRGTGRSEELCATVENYFRAQEMWGIPEKGEIDYTDD
LELDLASVVPAVSGPKRPQDRIDVPDLGAKFNDLFTASVDEGGYGREAST
RNDVAELDLSTPAGFSPEGALLLNSDDDPSNDVAIETQGSKIALQHGSVL
IAAITSCTNTSNPSVMLAAGLVAKKANALGLTVAPFVKTSLGPGSRVVTD
YLNATHLQKELDQLGFETVGYGCTTCIGNSGPLNPEIEAALTSKDLVCAS
VLSGNRNFEARIHGSIRANFLMSPPLVVAYALAGRIDIDLTNDPLGQDQN
GNDIYLKDLWPSPAELQEVIGSALKPEVFQKLYSNLDTASEKWVGIESAT
GATYDWNGDSTYIQLPPFFDNFSRTPATEGQDLIDTRPLGVFGDSVTTDH
ISPAGAITATSPAGKYLLEHGVEKAKFNSFGSRRGNDRIMTRGTFGNVRI
KNLMTPGIEGGYTQYFGDAHVPAPDQDIPSAENAKATFIYDAAVAYQQSG
RKLIIIAGEDYGMGSSRDWAAKGTALLGVKAVITKSFERIHRSNLIGMGV
LPLTFKDKADYDKIKDMHSCTFSITGLSGELKTMQEVTLTTSCGLSLPLI
ARLDTPAEIDYYLSGGILPYVLNQILDQ back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0008152 | metabolic process |
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