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Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
IPR000008 | C2 domain | SMART | SM00239 | C2_3c | coord: 816..917 e-value: 9.2E-20 score: 81.7 coord: 958..1052 e-value: 5.2E-5 score: 32.7 |
IPR000008 | C2 domain | PFAM | PF00168 | C2 | coord: 817..910 e-value: 7.8E-21 score: 74.2 coord: 959..1047 e-value: 2.0E-5 score: 24.7 |
IPR000008 | C2 domain | PROSITE | PS50004 | C2 | coord: 817..902 score: 15.178 |
IPR004841 | Amino acid permease/ SLC12A domain | PFAM | PF00324 | AA_permease | coord: 72..407 e-value: 1.6E-34 score: 119.3 |
IPR039010 | Synaptotagmin, SMP domain | PFAM | PF17047 | SMP_LBD | coord: 622..796 e-value: 3.6E-31 score: 107.9 |
IPR035892 | C2 domain superfamily | GENE3D | 2.60.40.150 | | coord: 813..944 e-value: 4.3E-28 score: 100.0 |
IPR035892 | C2 domain superfamily | GENE3D | 2.60.40.150 | | coord: 945..1081 e-value: 1.7E-17 score: 65.5 |
IPR029485 | Cationic amino acid transporter, C-terminal | PFAM | PF13906 | AA_permease_C | coord: 515..548 e-value: 2.9E-12 score: 46.4 |
None | No IPR available | GENE3D | 1.20.1740.10 | | coord: 62..415 e-value: 9.3E-90 score: 303.4 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..37 |
None | No IPR available | PANTHER | PTHR43243:SF17 | CATIONIC AMINO ACID TRANSPORTER-RELATED | coord: 444..548 |
None | No IPR available | PANTHER | PTHR43243:SF17 | CATIONIC AMINO ACID TRANSPORTER-RELATED | coord: 32..409 |
None | No IPR available | PANTHER | PTHR43243 | FAMILY NOT NAMED | coord: 32..409 coord: 444..548 |
None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 155..202 |
None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 280..299 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 203..220 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 388..408 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 511..530 |
None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 248..258 |
None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 587..1083 |
None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 123..133 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 300..324 |
None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 562..566 |
None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 1..71 |
None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 500..510 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 450..471 |
None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 325..343 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 72..93 |
None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 409..449 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 542..561 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 134..154 |
None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 531..541 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 478..499 |
None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 472..477 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 99..122 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 567..586 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 344..367 |
None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 94..98 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 229..247 |
None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 368..387 |
None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 221..228 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 259..279 |
None | No IPR available | CDD | cd00030 | C2 | coord: 817..921 e-value: 1.21341E-25 score: 99.8338 |
None | No IPR available | SUPERFAMILY | 49562 | C2 domain (Calcium/lipid-binding domain, CaLB) | coord: 816..936 |
None | No IPR available | SUPERFAMILY | 49562 | C2 domain (Calcium/lipid-binding domain, CaLB) | coord: 958..1075 |
None | No IPR available | TMHMM | TMhelix | | coord: 72..93 |
None | No IPR available | TMHMM | TMhelix | | coord: 132..154 |
None | No IPR available | TMHMM | TMhelix | | coord: 515..537 |
None | No IPR available | TMHMM | TMhelix | | coord: 387..409 |
None | No IPR available | TMHMM | TMhelix | | coord: 300..322 |
None | No IPR available | TMHMM | TMhelix | | coord: 565..587 |
None | No IPR available | TMHMM | TMhelix | | coord: 97..119 |
None | No IPR available | TMHMM | TMhelix | | coord: 225..247 |
None | No IPR available | TMHMM | TMhelix | | coord: 257..279 |
None | No IPR available | TMHMM | TMhelix | | coord: 449..471 |
None | No IPR available | TMHMM | TMhelix | | coord: 203..220 |
None | No IPR available | TMHMM | TMhelix | | coord: 344..366 |
None | No IPR available | TMHMM | TMhelix | | coord: 478..500 |
IPR031468 | Synaptotagmin-like mitochondrial-lipid-binding domain | PROSITE | PS51847 | SMP | coord: 622..796 score: 18.704 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk03141 ID=Tk03141|Name=Tk03141|organism=Tigriopus kingsejongensis|type=polypeptide|length=1083bp MNNDVSDVEAMPPGTPAPTERAREPNPGTSPSAASMKVKKKLFKLKDLRQ LQDTEANNDDSQFKKVLRTRDLISLGVGSCVGTGMYLVSGLVAKKIAGPA VVLSYLIAGFAALLSGACYSELAVRVPRTTGSAYIYTYVTVGEFIAFIIG WNMILEYVIGSAACARALSICVDIVTDGALSNITSAWSAPSDAMNDYGGA PDFPAFVITVLMMCLFFYGVKKSVIFNHVLNAINILTWVAIFLGGMLDMD FGNWSNFMPFGFSGVLKGASICFYSFIGFDIIATTGEETENPKRSIPKAI MISLTVVTVAYASCSSIMTLLVPYNELSDDSGLIRVWGQINRPGLEWVVS IGALAGLTVSMYGSMFPMPRIAYAMANDGLLCHSFRRVNRFGVPGFATLC LGLLAAFLTSPEVGNRGWNWATSLALARELIHGRNEYQRSQVCTVEGGRL VVKVLISLVCCFILFDLLLVYSEESSPGLGVTTICIFVLALLIICHIVSI AQFPQNRPQGFNTYGVPLVPSIGVLINIYLMMRLSPVTWMRFSVWMIIDE ASSIISVGKSLVGRAVFWSLLFSLGLWQWHPVWILLPMSMKFFWKRSQSS HNRPGPTLHGVSDFPTWVYFPDAERAEWINAILQQLWPALQEHMDQRLRQ MTQPGELLQGLNFTSTSLGQIPPRVEGVKVYKTNQVSRNEIIVDVNLVFA SNCYLKAGLWSWFGLAIRDLYLHGTLRITMCPLLKDLPLVGNIEVAFIAP PGLDFDMEGVANILDMPGLSRLVRKLVIEQISAFMVIPNVLKTPMVSQAE CELLKYCPTQFKSLEVVRITIIEAKDLKGMDFVFLGKRTADPYCVIKIGA QVGTTEIVKENLNPKWNFSLDFIVDATHLGVLELDVWDWDKGKSDDFMGR VVMALDQLFLASQRGPLALALDGPQGRISFASRWFDLTSDMAALDERDPR SHPEVKAVLQLYVDCCKNLVNKKGRSPKVKLTLKCGRYPAQESRVQDYSQ NPEIEEEFAFLVTNPLSDKLVIEIQDTKYGKDLGLVKVSLSELLSRPNLR LKSQPFRVEQARSNGQIVMELQLKFLRLSQNQI back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Biological Process
Term | Definition |
GO:0055085 | transmembrane transport |
Vocabulary: Cellular Component
Term | Definition |
GO:0016020 | membrane |
Vocabulary: Molecular Function
Term | Definition |
GO:0008289 | lipid binding |
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