Tk03150, Tk03150 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk03150
Unique NameTk03150
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length452
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 157..171
score: 31.19
coord: 283..297
score: 37.89
coord: 241..255
score: 34.71
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 340..378
e-value: 2.4E-7
score: 40.4
coord: 131..170
e-value: 1.1E-8
score: 44.9
coord: 173..212
e-value: 2.6E-7
score: 40.3
coord: 257..296
e-value: 1.7E-7
score: 40.9
coord: 390..428
e-value: 0.58
score: 18.5
coord: 215..254
e-value: 6.4E-7
score: 39.0
coord: 299..337
e-value: 0.0017
score: 27.6
IPR001680WD40 repeatPFAMPF00400WD40coord: 260..296
e-value: 4.8E-6
score: 27.1
coord: 133..170
e-value: 4.7E-7
score: 30.3
coord: 341..378
e-value: 3.5E-5
score: 24.4
coord: 217..254
e-value: 9.0E-6
score: 26.2
coord: 175..212
e-value: 5.0E-6
score: 27.0
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 347..387
score: 11.11
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 138..179
score: 13.683
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 264..305
score: 15.187
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 180..221
score: 12.413
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 222..263
score: 14.953
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 135..430
e-value: 9.0E-117
score: 391.0
NoneNo IPR availablePANTHERPTHR19923WD40 REPEAT PROTEINPRL1/PRL2-RELATEDcoord: 109..447
NoneNo IPR availableCDDcd00200WD40coord: 134..428
e-value: 3.4441E-87
score: 266.123
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 241..255
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 283..297
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 138..437
score: 58.293
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 127..428

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
snap_masked-scaffold791_size96783-processed-gene-0.1-mRNA-1snap_masked-scaffold791_size96783-processed-gene-0.1-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk03150 ID=Tk03150|Name=Tk03150|organism=Tigriopus kingsejongensis|type=polypeptide|length=452bp
MGASSEDVTRHSVHTLVFRSLKRTHDMFLADQGQLPASARSAEDLWKRTK
ARDIYGSIRTAVDGAQSRGHYGQNAAAPEAQAVAVYQPSAVATQGVGAGS
GEAGAGGSSAGSTAVAARTPMTLPKPQWHAPWKLYRVISGHTGWVRCAAV
EPGNQWFCTGAADRMIKIWDLASGQLKLSLTGHVSTVRGLAVSDRHPYLF
SCGEDRQVKCWDLEYNKVIRHYHGHLSAVYDLSLHPTLDVLVTAGRDSTA
RVWDMRTKVNIHTLTGHSSTISTVKCQASEPQILTGSNDSTVRLWDLAAG
KSICTLTNHKKSVRSIVVHPKLYMFASAAPDNIKQWKCPKGQFIQNLSGH
KAIINCMAVNSDGVLVSGADNGTMHFWDWKTGYNFQRSQAQVQPGSMDSE
AGVFAMTFDQSGSRLITCEADKTIKIYKEDESATDESHPINFKPNILKRA
RY
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020472G-protein_beta_WD-40_rep
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
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