Tk03153, Tk03153 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk03153
Unique NameTk03153
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length394
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002119Histone H2APRINTSPR00620HISTONEH2Acoord: 57..70
score: 89.46
coord: 71..85
score: 73.33
coord: 99..117
score: 78.65
coord: 42..57
score: 85.3
coord: 13..35
score: 73.79
IPR002119Histone H2ASMARTSM00414h2a4coord: 2..122
e-value: 3.4E-77
score: 272.4
IPR002119Histone H2ACDDcd00074H2Acoord: 7..119
e-value: 7.4323E-76
score: 228.759
NoneNo IPR availableGENE3D1.10.3590.10coord: 229..300
e-value: 9.7E-9
score: 36.6
NoneNo IPR availableGENE3D2.60.470.10coord: 301..348
e-value: 9.7E-9
score: 36.6
coord: 206..228
e-value: 9.7E-9
score: 36.6
NoneNo IPR availableGENE3D1.10.287.770coord: 184..205
e-value: 9.7E-9
score: 36.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21
NoneNo IPR availablePANTHERPTHR23430:SF66HISTONE H2Acoord: 1..122
NoneNo IPR availablePANTHERPTHR23430HISTONE H2Acoord: 1..122
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..175
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 176..198
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 199..394
NoneNo IPR availableTMHMMTMhelixcoord: 176..198
IPR001873Epithelial sodium channelPFAMPF00858ASCcoord: 155..348
e-value: 1.4E-11
score: 44.0
IPR007125Histone H2A/H2B/H3PFAMPF00125Histonecoord: 9..88
e-value: 1.4E-14
score: 54.5
IPR009072Histone-foldGENE3D1.10.20.10coord: 2..127
e-value: 5.4E-62
score: 209.2
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 15..119
IPR032454Histone H2A, C-terminal domainPFAMPF16211Histone_H2A_Ccoord: 91..122
e-value: 9.7E-19
score: 66.7
IPR032458Histone H2A conserved sitePROSITEPS00046HISTONE_H2Acoord: 21..27

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
snap_masked-scaffold791_size96783-processed-gene-0.4-mRNA-1snap_masked-scaffold791_size96783-processed-gene-0.4-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk03153 ID=Tk03153|Name=Tk03153|organism=Tigriopus kingsejongensis|type=polypeptide|length=394bp
MSARGKGGKAKEPSKSRSSRAGLQFPVGRIHRLLRKGSYAERVGAGAPVY
LAAVMEYLAAEVLELAGNAATDNKKARIVPRHLQLAIRNDEELNKLLQGV
TIAGGGVLPNIQAVLLPKKTESDRILKKIEMQTKNLKKKTESLISIYQQW
VWKVCDEISIHGFIWHNRTMNPGIRLSILAFTLVILFGLPTFLCYQVVKF
TENQQINNDIEWESANRVKYPNITICHPRYFDLRLLAKYSISESTANYMT
MVLGKGGSRTQEKRTYPELEAAMDLGEMELQETMRKYNMNIVELFQEVAV
RCNDFIPYCDLHGSVYYSNGSDPDQITCCERLFQNRPIFTPAGTCFVSTA
EIWEFYPFIFSSMKIWLDLMSNHTLGERLEEPLGYYDQPNLDLH
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002119Histone_H2A
IPR001873ENaC
IPR007125Histone_H2A/H2B/H3
IPR009072Histone-fold
IPR032454Histone_H2A_C
IPR032458Histone_H2A_CS
Vocabulary: Cellular Component
TermDefinition
GO:0000786nucleosome
GO:0005634nucleus
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0005272sodium channel activity
GO:0046982protein heterodimerization activity
Vocabulary: Biological Process
TermDefinition
GO:0006814sodium ion transport
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