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Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
IPR020598 | Ribosomal RNA adenine methylase transferase, N-terminal | SMART | SM00650 | rADcneu6 | coord: 49..218 e-value: 3.5E-84 score: 295.6 |
IPR011530 | Ribosomal RNA adenine dimethylase | TIGRFAM | TIGR00755 | TIGR00755 | coord: 35..309 e-value: 3.0E-78 score: 260.6 |
IPR011530 | Ribosomal RNA adenine dimethylase | HAMAP | MF_00607 | 16SrRNA_methyltr_A | coord: 33..311 score: 40.155 |
None | No IPR available | GENE3D | 3.40.50.150 | | coord: 35..220 e-value: 5.0E-67 score: 227.1 |
None | No IPR available | GENE3D | 1.10.8.480 | | coord: 222..318 e-value: 3.0E-36 score: 125.9 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..27 |
None | No IPR available | PANTHER | PTHR11727:SF7 | DIMETHYLADENOSINE TRANSFERASE-RELATED | coord: 25..315 |
None | No IPR available | CDD | cd02440 | AdoMet_MTases | coord: 65..165 e-value: 4.49461E-8 score: 48.1951 |
IPR001737 | Ribosomal RNA adenine methyltransferase KsgA/Erm | PFAM | PF00398 | RrnaAD | coord: 35..258 e-value: 8.6E-62 score: 208.5 |
IPR001737 | Ribosomal RNA adenine methyltransferase KsgA/Erm | PANTHER | PTHR11727 | DIMETHYLADENOSINE TRANSFERASE | coord: 25..315 |
IPR001737 | Ribosomal RNA adenine methyltransferase KsgA/Erm | PROSITE | PS51689 | SAM_RNA_A_N6_MT | coord: 35..314 score: 65.882 |
IPR020596 | Ribosomal RNA adenine methylase transferase, conserved site | PROSITE | PS01131 | RRNA_A_DIMETH | coord: 65..92 |
IPR029063 | S-adenosyl-L-methionine-dependent methyltransferase | SUPERFAMILY | 53335 | S-adenosyl-L-methionine-dependent methyltransferases | coord: 291..312 coord: 33..249 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk03380 ID=Tk03380|Name=Tk03380|organism=Tigriopus kingsejongensis|type=polypeptide|length=318bp MPKMKGGRKVRKTGSGMSTVEAAGSGGGGQQGMVFNTGLGQHILKNPLVV QSIIDKAALRSTDVVLEIGPGTGNLTVRALEKCKKLIACEVDPRMVAELQ KRVQGTHFQSKLQIMVGDVIKTDLPFFDACVANVPYQISSPLVFKLLLHR PFFRCAVLMFQREFAQRLVAKPGDKLYCRLSINTQLLARVDHVMKVGKGN FRPPPKVESSVVRIEPRNPPPPINFKEWDGLTRVAFVRKNKTLGAAFNQT TVLMMLEKNYRVHLSLADEPVPEKIDIKSIIETVLAEIAFKEKRARSMDI DDFMKLLHAFNAKGIHFV back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
Term | Definition |
GO:0008649 | rRNA methyltransferase activity |
GO:0000179 | rRNA (adenine-N6,N6-)-dimethyltransferase activity |
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