Tk03383, Tk03383 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk03383
Unique NameTk03383
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length594
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 459..482
e-value: 0.53
score: 19.3
coord: 490..513
e-value: 0.078
score: 22.1
coord: 520..543
e-value: 11.0
score: 12.8
coord: 401..424
e-value: 0.055
score: 22.6
coord: 430..452
e-value: 0.17
score: 21.0
coord: 372..395
e-value: 0.29
score: 20.2
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 374..395
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 403..425
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 492..513
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 522..543
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 461..482
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 432..452
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 490..518
score: 10.824
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 372..400
score: 9.432
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 430..457
score: 9.723
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 459..482
score: 9.203
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 401..429
score: 10.845
NoneNo IPR availableGENE3D3.30.160.60coord: 372..424
e-value: 5.2E-10
score: 41.6
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 491..513
e-value: 3.2E-4
score: 20.9
NoneNo IPR availableGENE3D3.30.160.60coord: 426..485
e-value: 2.1E-9
score: 39.3
coord: 486..547
e-value: 2.3E-10
score: 42.4
NoneNo IPR availablePANTHERPTHR24409FAMILY NOT NAMEDcoord: 372..543
NoneNo IPR availablePANTHERPTHR24409:SF295IP01295P-RELATEDcoord: 372..543
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..594
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.509
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 399..452
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 489..540
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 373..410
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 455..500

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold153_size302544-snap-gene-2.23-mRNA-1maker-scaffold153_size302544-snap-gene-2.23-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk03383 ID=Tk03383|Name=Tk03383|organism=Tigriopus kingsejongensis|type=polypeptide|length=594bp
MGWIKTAVCVAALAWGGRSVYRVRAACRPVRVPQQSLLARHCSPAHHYLD
AYKVPITDRSLLVLRGTGSTLAVSVADVASAFFTCPVFVRGEKHVLERIL
GARNTGLTTWQPGQKNYLWTVARRSETEILLTWKYGDLEGATWFFLPPSE
KVLVLGSALKVQPRLNRAVDSVQAPAFFLRRSLTHLKQGPLPIRERLGHL
LAVSSGLHPPTPECTTMKLQQHAYPWTELGALLEDERWHDFPVQCQDDLV
HCPAIFIQLLLSMSEFDLTFPTGIDFWEQSLILPDLTTHQLQDLLRNMFQ
REAAWSDSVIPATWQTDVPWLTWPSFVNLSSHPSPQSWVQGVLDDVIREL
PIDRSDARALQPTEPGECKLRPECNICGKTLFDKHSLKKHVDVVHFNIRR
FQCQSCPKRFSMKNDLEGHVSAVHHRIKTHICDTCGLGLSNRSSLRSHKL
THRSDTKIIQCVHCGSSFRHMSTYRKHISRVHEFNIEKRVPCEHCGKMYN
HQEGLKRHIKKFHSSGEAKVSCSICRATFAFKYELNRHCRKWHELLPLGD
DAILAPANVDPTPGNADQDSVIRPLTVSNENVTLPTEPLPPEGL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR036236Znf_C2H2_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
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